PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000319264	[[12775019, 12776026], [12821384, 12822130]]	[[12775714, 12776026], [12821384, 12821759]]
ENST00000489107	[[12775666, 12776026], [12777198, 12777577]]	None
NM_203403	[[12775011, 12776026], [12821384, 12823059]]	[[12775714, 12776026], [12821384, 12821759]]

Promoter

Chrom	Start	End	Description
chr9	12774983	12774997	CAGE_peak_2_at_C9orf150_5end
chr9	12775011	12775028	CAGE_peak_1_at_C9orf150_5end
chr9	12775270	12775283	CAGE_peak_4_at_C9orf150_5end
chr9	12775846	12775915	CAGE_peak_3_at_C9orf150_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I012771	12771400	12773138	0.4	[{'connected_gene': 'LURAP1L', 'score': 6.03}, {'connected_gene': 'TYRP1', 'score': 5.73}, {'connected_gene': 'LURAP1L-AS1', 'score': 5.38}, {'connected_gene': 'RN7SL849P', 'score': 0.44}]
chr9	GH09I012748	12748082	12748231	0.38	[{'connected_gene': 'LURAP1L', 'score': 10.52}, {'connected_gene': 'RN7SL849P', 'score': 0.37}, {'connected_gene': 'TYRP1', 'score': 0.21}, {'connected_gene': 'LURAP1L-AS1', 'score': 0.2}]
chr9	GH09I012770	12770462	12770591	0.2	[{'connected_gene': 'LURAP1L', 'score': 0.77}, {'connected_gene': 'RN7SL849P', 'score': 0.44}, {'connected_gene': 'LURAP1L-AS1', 'score': 0.26}]
chr9	GH09I012718	12718176	12719291	0.66	[{'connected_gene': 'LURAP1L', 'score': 10.62}, {'connected_gene': 'LURAP1L-AS1', 'score': 10.34}, {'connected_gene': 'TYRP1', 'score': 0.29}, {'connected_gene': 'RN7SL849P', 'score': 0.25}]
chr9	GH09I012808	12808403	12811222	0.43	[{'connected_gene': 'LURAP1L', 'score': 5.68}, {'connected_gene': 'LURAP1L-AS1', 'score': 0.77}]
chr9	GH09I012794	12794182	12794391	0.88	[{'connected_gene': 'LURAP1L', 'score': 0.37}, {'connected_gene': 'LURAP1L-AS1', 'score': 0.34}]
chr9	GH09I012789	12789036	12792100	0.43	[{'connected_gene': 'LURAP1L', 'score': 0.37}, {'connected_gene': 'LURAP1L-AS1', 'score': 0.34}]
chr9	GH09I012774	12774601	12779204	2.17	[{'connected_gene': 'LURAP1L', 'score': 556.72}, {'connected_gene': 'LURAP1L-AS1', 'score': 10.67}]
chr9	GH09I012797	12797092	12799195	0.63	[{'connected_gene': 'LURAP1L', 'score': 11.87}, {'connected_gene': 'LURAP1L-AS1', 'score': 0.37}]
chr9	GH09I012811	12811703	12820093	1.42	[{'connected_gene': 'LURAP1L-AS1', 'score': 550.77}, {'connected_gene': 'LURAP1L', 'score': 18.58}, {'connected_gene': 'GC09M012817', 'score': 0.77}]
chr9	GH09I012795	12794442	12794811	0.94	[{'connected_gene': 'LURAP1L-AS1', 'score': 0.37}, {'connected_gene': 'LURAP1L', 'score': 0.37}]
chr9	GH09I012783	12783205	12786520	1.67	[{'connected_gene': 'LURAP1L-AS1', 'score': 5.09}, {'connected_gene': 'LURAP1L', 'score': 3.21}]
chr9	GH09I012825	12825599	12827134	0.38	[{'connected_gene': 'GC09P012827', 'score': 550.77}, {'connected_gene': 'LURAP1L', 'score': 11.13}, {'connected_gene': 'GC09M012817', 'score': 0.44}]
chr9	GH09I012820	12820612	12822242	0.2	[{'connected_gene': 'GC09M012817', 'score': 550.77}, {'connected_gene': 'LURAP1L', 'score': 16.49}, {'connected_gene': 'GC09P012827', 'score': 0.44}]