PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000563496	[[67858735, 67860399], [67873610, 67874023], [67874111, 67874222], [67874563, 67874825]]	[[67860285, 67860399], [67873610, 67874000]]
ENST00000566129	[[67859824, 67860399], [67867213, 67867352]]	None
NM_001193502	[[67858735, 67860399], [67873610, 67874023], [67874111, 67874222], [67874563, 67874825]]	[[67860285, 67860399], [67873610, 67874000]]

Promoter

Chrom	Start	End	Description
chr8	67874805	67874831	CAGE_peak_1_at_TCF24_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I066917	66917201	66921428	1.01	[{'connected_gene': 'CSPP1', 'score': 10.23}, {'connected_gene': 'COPS5', 'score': 10.21}, {'connected_gene': 'PPP1R42', 'score': 9.82}, {'connected_gene': 'TCF24', 'score': 5.0}, {'connected_gene': 'GC08M066923', 'score': 0.77}, {'connected_gene': 'MCMDC2', 'score': 0.25}]
chr8	GH08I067060	67060794	67066168	2.31	[{'connected_gene': 'CSPP1', 'score': 550.77}, {'connected_gene': 'COPS5', 'score': 550.34}, {'connected_gene': 'ARFGEF1', 'score': 37.87}, {'connected_gene': 'C8orf44', 'score': 15.08}, {'connected_gene': 'TCF24', 'score': 5.33}]
chr8	GH08I066922	66922052	66927158	1.58	[{'connected_gene': 'SNHG6', 'score': 550.77}, {'connected_gene': 'ARFGEF1', 'score': 26.93}, {'connected_gene': 'C8orf44', 'score': 20.36}, {'connected_gene': 'CSPP1', 'score': 12.91}, {'connected_gene': 'TCF24', 'score': 5.12}, {'connected_gene': 'VCPIP1', 'score': 4.29}, {'connected_gene': 'SNORD87', 'score': 0.77}, {'connected_gene': 'GC08M066924', 'score': 0.77}, {'connected_gene': 'GC08M066923', 'score': 0.77}, {'connected_gene': 'MCMDC2', 'score': 0.23}]
chr8	GH08I067054	67054450	67055711	0.89	[{'connected_gene': 'PPP1R42', 'score': 550.77}, {'connected_gene': 'TCF24', 'score': 4.78}, {'connected_gene': 'LOC105375885', 'score': 0.31}, {'connected_gene': 'COPS5', 'score': 0.31}]
chr8	GH08I066870	66870100	66871426	1.68	[{'connected_gene': 'MCMDC2', 'score': 550.77}, {'connected_gene': 'TCF24', 'score': 4.89}, {'connected_gene': 'GC08M066923', 'score': 0.23}]
chr8	GH08I066961	66961036	66963426	1.49	[{'connected_gene': 'TCF24', 'score': 555.2}, {'connected_gene': 'SNHG6', 'score': 11.63}, {'connected_gene': 'SNORD87', 'score': 11.63}, {'connected_gene': 'PPP1R42', 'score': 10.17}, {'connected_gene': 'CSPP1', 'score': 10.16}, {'connected_gene': 'COPS5', 'score': 10.14}]
chr8	GH08I066715	66715744	66716684	0.97	[{'connected_gene': 'TCF24', 'score': 4.84}, {'connected_gene': 'SGK3', 'score': 0.77}, {'connected_gene': 'C8orf44-SGK3', 'score': 0.25}, {'connected_gene': 'PTTG3P', 'score': 0.23}]