PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000340457	[[102277471, 102278080], [102279160, 102279281], [102279569, 102279646], [102280650, 102280861], [102281058, 102281220], [102283076, 102283238]]	[[102277971, 102278080], [102279160, 102279281], [102279569, 102279646], [102280650, 102280861], [102281058, 102281220], [102283076, 102283188]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I102444	102444596	102445815	0.98	[{'connected_gene': 'ORAI2', 'score': 26.58}, {'connected_gene': 'ENSG00000272949', 'score': 18.17}, {'connected_gene': 'POLR2J', 'score': 14.01}, {'connected_gene': 'MIR548O', 'score': 12.64}, {'connected_gene': 'PRKRIP1', 'score': 12.54}, {'connected_gene': 'UPK3BL1', 'score': 5.0}, {'connected_gene': 'PIR32382', 'score': 0.39}, {'connected_gene': 'ENSG00000239480', 'score': 0.39}]
chr7	GH07I102571	102571800	102573263	2.06	[{'connected_gene': 'POLR2J3', 'score': 561.8}, {'connected_gene': 'CRYZP1', 'score': 82.46}, {'connected_gene': 'ENSG00000213385', 'score': 77.54}, {'connected_gene': 'PRKRIP1', 'score': 49.61}, {'connected_gene': 'DNAJC2', 'score': 43.22}, {'connected_gene': 'PMPCB', 'score': 41.1}, {'connected_gene': 'ENSG00000239486', 'score': 40.78}, {'connected_gene': 'FAM185A', 'score': 32.12}, {'connected_gene': 'NAPEPLD', 'score': 20.1}, {'connected_gene': 'ALKBH4', 'score': 11.17}, {'connected_gene': 'UPK3BL1', 'score': 10.48}, {'connected_gene': 'POLR2J2', 'score': 9.39}, {'connected_gene': 'PIR31678', 'score': 0.39}, {'connected_gene': 'ENSG00000270249', 'score': 0.37}]
chr7	GH07I101861	101861841	101863302	1.33	[{'connected_gene': 'CUX1', 'score': 16.81}, {'connected_gene': 'SRRT', 'score': 11.01}, {'connected_gene': 'ENSG00000213385', 'score': 9.69}, {'connected_gene': 'UPK3BL1', 'score': 6.07}, {'connected_gene': 'RASA4B', 'score': 4.14}, {'connected_gene': 'GC07P101859', 'score': 0.77}, {'connected_gene': 'ENSG00000272219', 'score': 0.15}]
chr7	GH07I101895	101895930	101899389	0.43	[{'connected_gene': 'CUX1', 'score': 11.62}, {'connected_gene': 'UPK3BL1', 'score': 5.57}, {'connected_gene': 'GC07P101859', 'score': 0.28}, {'connected_gene': 'ENSG00000272219', 'score': 0.21}]
chr7	GH07I102026	102026766	102030012	0.77	[{'connected_gene': 'CUX1', 'score': 10.45}, {'connected_gene': 'RASA4DP', 'score': 5.24}, {'connected_gene': 'UPK3BL1', 'score': 4.38}, {'connected_gene': 'GC07M102004', 'score': 0.77}, {'connected_gene': 'GC07M101947', 'score': 0.21}]
chr7	GH07I101984	101984983	101987124	1.49	[{'connected_gene': 'CUX1', 'score': 11.25}, {'connected_gene': 'RASA4DP', 'score': 4.94}, {'connected_gene': 'UPK3BL1', 'score': 4.3}, {'connected_gene': 'GC07M101947', 'score': 0.37}, {'connected_gene': 'GC07M102004', 'score': 0.26}]
chr7	GH07I102834	102834503	102837874	0.99	[{'connected_gene': 'RNU6-1136P', 'score': 550.77}, {'connected_gene': 'GC07P102835', 'score': 550.77}, {'connected_gene': 'RPL23AP95', 'score': 12.9}, {'connected_gene': 'POLR2J3', 'score': 10.21}, {'connected_gene': 'UPK3BL1', 'score': 8.51}, {'connected_gene': 'RASA4DP', 'score': 7.04}, {'connected_gene': 'LRWD1', 'score': 5.4}, {'connected_gene': 'ARMC10', 'score': 5.31}, {'connected_gene': 'RN7SKP198', 'score': 0.34}, {'connected_gene': 'FAM185A', 'score': 0.17}, {'connected_gene': 'FBXL13', 'score': 0.07}]
chr7	GH07I102870	102870840	102877146	1.6	[{'connected_gene': 'LRRC17', 'score': 13.95}, {'connected_gene': 'CRYZP1', 'score': 11.47}, {'connected_gene': 'FAM185A', 'score': 10.71}, {'connected_gene': 'ENSG00000213385', 'score': 10.25}, {'connected_gene': 'POLR2J3', 'score': 9.8}, {'connected_gene': 'UPK3BL1', 'score': 9.27}, {'connected_gene': 'ARMC10', 'score': 6.16}, {'connected_gene': 'ORAI2', 'score': 4.87}, {'connected_gene': 'LRWD1', 'score': 4.67}, {'connected_gene': 'RN7SKP198', 'score': 0.37}, {'connected_gene': 'FBXL13', 'score': 0.08}]
chr7	GH07I101947	101947201	101948800	1.27	[{'connected_gene': 'UPK3BL1', 'score': 6.74}, {'connected_gene': 'SPDYE6', 'score': 4.05}, {'connected_gene': 'ENSG00000272219', 'score': 0.39}, {'connected_gene': 'GC07M101947', 'score': 0.37}, {'connected_gene': 'GC07P101859', 'score': 0.17}, {'connected_gene': 'CUX1', 'score': 0.12}]
chr7	GH07I102642	102642791	102642850	0.5	[{'connected_gene': 'UPK3BL1', 'score': 550.77}, {'connected_gene': 'ENSG00000205236', 'score': 550.77}, {'connected_gene': 'POLR2J2', 'score': 0.31}, {'connected_gene': 'ENSG00000267645', 'score': 0.31}, {'connected_gene': 'ENSG00000279168', 'score': 0.28}]
chr7	GH07I102025	102025891	102026060	0.51	[{'connected_gene': 'UPK3BL1', 'score': 4.87}, {'connected_gene': 'GC07M102004', 'score': 0.77}, {'connected_gene': 'GC07M101947', 'score': 0.22}, {'connected_gene': 'CUX1', 'score': 0.08}]
chr7	GH07I102023	102023305	102025862	1.3	[{'connected_gene': 'RASA4DP', 'score': 5.25}, {'connected_gene': 'UPK3BL1', 'score': 4.92}, {'connected_gene': 'GC07M102004', 'score': 0.44}, {'connected_gene': 'GC07M101947', 'score': 0.22}, {'connected_gene': 'CUX1', 'score': 0.08}]
chr7	GH07I102011	102011898	102014543	0.73	[{'connected_gene': 'ENSG00000252824', 'score': 10.85}, {'connected_gene': 'CUX1', 'score': 10.63}, {'connected_gene': 'UPK3BL1', 'score': 4.1}, {'connected_gene': 'GC07M102004', 'score': 0.37}, {'connected_gene': 'GC07M101947', 'score': 0.25}]
chr7	GH07I102638	102638299	102639558	0.2	[{'connected_gene': 'GC07P102641', 'score': 550.77}, {'connected_gene': 'PIR58350', 'score': 550.77}, {'connected_gene': 'GC07P102642', 'score': 550.77}, {'connected_gene': 'PIR51755', 'score': 0.77}, {'connected_gene': 'UPK3BL1', 'score': 0.77}, {'connected_gene': 'ENSG00000205236', 'score': 0.77}, {'connected_gene': 'POLR2J2', 'score': 0.29}, {'connected_gene': 'ENSG00000267645', 'score': 0.29}, {'connected_gene': 'ENSG00000279168', 'score': 0.26}]