PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_001130677	[[36827955, 36831187]]	[[36829608, 36830748]]

Promoter

Chrom	Start	End	Description
chr17	36831156	36831186	CAGE_peak_2_at_C17orf96_5end
chr17	36831190	36831217	CAGE_peak_1_at_C17orf96_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I038685	38685358	38685973	0.51	[{'connected_gene': 'CISD3', 'score': 12.23}, {'connected_gene': 'PCGF2', 'score': 11.57}, {'connected_gene': 'PSMB3', 'score': 11.04}, {'connected_gene': 'GC17M038684', 'score': 0.44}, {'connected_gene': 'EPOP', 'score': 0.39}, {'connected_gene': 'LOC105371764', 'score': 0.37}]
chr17	GH17I038657	38657117	38658431	1.34	[{'connected_gene': 'EPOP', 'score': 2.04}, {'connected_gene': 'ARHGAP23', 'score': 2.0}, {'connected_gene': 'SRCIN1', 'score': 1.89}, {'connected_gene': 'GC17M038673', 'score': 0.37}, {'connected_gene': 'GC17M038636', 'score': 0.34}]
chr17	GH17I038676	38676254	38676377	0.54	[{'connected_gene': 'EPOP', 'score': 550.77}, {'connected_gene': 'MLLT6', 'score': 12.68}, {'connected_gene': 'PCGF2', 'score': 12.41}, {'connected_gene': 'CISD3', 'score': 12.3}, {'connected_gene': 'PSMB3', 'score': 11.06}, {'connected_gene': 'PIP4K2B', 'score': 11.06}, {'connected_gene': 'CWC25', 'score': 10.23}, {'connected_gene': 'GC17M038684', 'score': 0.37}]
chr17	GH17I038677	38676802	38677600	1.2	[{'connected_gene': 'EPOP', 'score': 550.77}, {'connected_gene': 'MLLT6', 'score': 12.68}, {'connected_gene': 'PCGF2', 'score': 12.41}, {'connected_gene': 'CISD3', 'score': 12.3}, {'connected_gene': 'PSMB3', 'score': 11.06}, {'connected_gene': 'PIP4K2B', 'score': 11.06}, {'connected_gene': 'CWC25', 'score': 10.23}, {'connected_gene': 'GC17M038684', 'score': 0.37}]
chr17	GH17I038671	38671928	38672057	0.54	[{'connected_gene': 'GC17M038673', 'score': 550.77}, {'connected_gene': 'SRCIN1', 'score': 11.69}, {'connected_gene': 'CISD3', 'score': 11.65}, {'connected_gene': 'EPOP', 'score': 0.77}, {'connected_gene': 'GC17M038636', 'score': 0.29}]
chr17	GH17I038693	38693283	38694611	1.09	[{'connected_gene': 'GC17M038684', 'score': 550.77}, {'connected_gene': 'LOC105371764', 'score': 0.39}, {'connected_gene': 'EPOP', 'score': 0.37}]
chr17	GH17I038414	38414318	38416667	1.78	[{'connected_gene': 'GC17M038418', 'score': 550.77}, {'connected_gene': 'GC17M038417', 'score': 550.77}, {'connected_gene': 'PIR32801', 'score': 550.77}, {'connected_gene': 'LOC105371762', 'score': 27.5}, {'connected_gene': 'GPR179', 'score': 11.96}, {'connected_gene': 'RPL19', 'score': 10.22}, {'connected_gene': 'FBXL20', 'score': 9.71}, {'connected_gene': 'EPOP', 'score': 1.72}, {'connected_gene': 'GC17M038410', 'score': 0.77}, {'connected_gene': 'GC17P038493', 'score': 0.44}]
chr17	GH17I038673	38673867	38675577	2.04	[{'connected_gene': 'GC17M038673', 'score': 550.77}, {'connected_gene': 'EPOP', 'score': 550.77}, {'connected_gene': 'PCGF2', 'score': 29.05}, {'connected_gene': 'PIP4K2B', 'score': 16.23}, {'connected_gene': 'MLLT6', 'score': 12.66}, {'connected_gene': 'CISD3', 'score': 12.29}, {'connected_gene': 'PSMB3', 'score': 11.06}, {'connected_gene': 'CWC25', 'score': 10.23}]
chr17	GH17I038674	38672728	38672877	0.59	[{'connected_gene': 'GC17M038673', 'score': 550.77}, {'connected_gene': 'EPOP', 'score': 0.77}, {'connected_gene': 'GC17M038636', 'score': 0.28}]
chr17	GH17I038672	38672428	38672577	0.63	[{'connected_gene': 'GC17M038673', 'score': 550.77}, {'connected_gene': 'EPOP', 'score': 0.77}, {'connected_gene': 'GC17M038636', 'score': 0.28}]