PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_182905	[[14510, 14940], [15080, 15149], [15908, 16061], [16717, 16876], [16964, 17166], [17343, 17479], [17718, 17855], [18027, 18174], [18380, 18492], [24850, 25004], [29601, 29739]]	[[14806, 14940], [15080, 15149], [15908, 16061], [16717, 16876], [16964, 17166], [17343, 17479], [17718, 17855], [18027, 18174], [18380, 18492], [24850, 24999]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I000270	270399	275806	2.44	[{'connected_gene': 'DOCK8', 'score': 579.75}, {'connected_gene': 'ENSG00000235880', 'score': 566.03}, {'connected_gene': 'C9orf66', 'score': 26.77}, {'connected_gene': 'CBWD1', 'score': 23.23}, {'connected_gene': 'WASHC1', 'score': 6.38}, {'connected_gene': 'FOXD4', 'score': 5.76}, {'connected_gene': 'GC09M000242', 'score': 0.34}]
chr9	GH09I000289	289254	291694	0.38	[{'connected_gene': 'DOCK8', 'score': 17.9}, {'connected_gene': 'C9orf66', 'score': 12.2}, {'connected_gene': 'CBWD1', 'score': 5.72}, {'connected_gene': 'WASHC1', 'score': 5.14}, {'connected_gene': 'GC09M000242', 'score': 0.77}, {'connected_gene': 'ENSG00000235880', 'score': 0.37}]
chr9	GH09I000311	311365	312954	0.54	[{'connected_gene': 'DOCK8', 'score': 11.24}, {'connected_gene': 'C9orf66', 'score': 11.1}, {'connected_gene': 'CBWD1', 'score': 4.62}, {'connected_gene': 'WASHC1', 'score': 4.5}, {'connected_gene': 'GC09M000242', 'score': 0.37}, {'connected_gene': 'GC09P000333', 'score': 0.34}]
chr9	GH09I000268	268401	269796	1.2	[{'connected_gene': 'CBWD1', 'score': 31.99}, {'connected_gene': 'DOCK8', 'score': 15.35}, {'connected_gene': 'WASHC1', 'score': 12.78}, {'connected_gene': 'RPL12P25', 'score': 11.77}, {'connected_gene': 'C9orf66', 'score': 7.74}, {'connected_gene': 'KANK1', 'score': 1.16}, {'connected_gene': 'ENSG00000235880', 'score': 0.77}, {'connected_gene': 'GC09P000245', 'score': 0.34}, {'connected_gene': 'GC09M000242', 'score': 0.31}]
chr9	GH09I000303	303969	305340	0.74	[{'connected_gene': 'CBWD1', 'score': 6.46}, {'connected_gene': 'DOCK8', 'score': 6.09}, {'connected_gene': 'WASHC1', 'score': 5.05}, {'connected_gene': 'GC09M000242', 'score': 0.39}, {'connected_gene': 'GC09P000333', 'score': 0.31}]
chr9	GH09I000468	468354	471443	1.92	[{'connected_gene': 'KANK1', 'score': 550.77}, {'connected_gene': 'RPL12P25', 'score': 21.86}, {'connected_gene': 'WASHC1', 'score': 14.35}, {'connected_gene': 'CBWD1', 'score': 12.14}, {'connected_gene': 'FOXD4', 'score': 10.02}, {'connected_gene': 'ENSG00000227155', 'score': 0.34}, {'connected_gene': 'LOC105375945', 'score': 0.14}]
chr9	GH09I000028	28400	29601	0.5	[{'connected_gene': 'LOC102724813', 'score': 550.77}, {'connected_gene': 'ENSG00000227518', 'score': 550.77}, {'connected_gene': 'WASHC1', 'score': 550.77}, {'connected_gene': 'MIR1302-9', 'score': 550.77}, {'connected_gene': 'GC09M000028', 'score': 0.39}, {'connected_gene': 'LOC102724727', 'score': 0.34}]
chr9	GH09I000029	28057	28116	0.5	[{'connected_gene': 'LOC102724813', 'score': 550.77}, {'connected_gene': 'ENSG00000227518', 'score': 550.77}, {'connected_gene': 'WASHC1', 'score': 550.77}, {'connected_gene': 'MIR1302-9', 'score': 0.77}, {'connected_gene': 'LOC102724727', 'score': 0.34}]
chr9	GH09I000112	112857	115644	0.89	[{'connected_gene': 'LINC01388', 'score': 550.77}, {'connected_gene': 'PIR36916', 'score': 550.77}, {'connected_gene': 'PIR48620', 'score': 550.77}, {'connected_gene': 'GC09P000118', 'score': 550.77}, {'connected_gene': 'PIR58570', 'score': 550.77}, {'connected_gene': 'GC09P000117', 'score': 550.77}, {'connected_gene': 'CBWD1', 'score': 15.72}, {'connected_gene': 'WASHC1', 'score': 8.97}, {'connected_gene': 'FOXD4', 'score': 7.06}, {'connected_gene': 'GC09M000091', 'score': 0.77}]
chr9	GH09I000073	73200	74001	0.68	[{'connected_gene': 'PGM5P3', 'score': 550.77}, {'connected_gene': 'PGM5P3-AS1', 'score': 550.77}, {'connected_gene': 'WASHC1', 'score': 7.16}, {'connected_gene': 'ENSG00000227917', 'score': 0.31}]
chr9	GH09I000276	276228	282843	1.49	[{'connected_gene': 'WASHC1', 'score': 37.2}, {'connected_gene': 'DOCK8', 'score': 25.79}, {'connected_gene': 'CBWD1', 'score': 17.27}, {'connected_gene': 'RPL12P25', 'score': 13.81}, {'connected_gene': 'C9orf66', 'score': 12.69}, {'connected_gene': 'ENSG00000235880', 'score': 5.59}, {'connected_gene': 'GC09M000242', 'score': 0.39}]
chr9	GH09I000307	307061	307210	0.84	[{'connected_gene': 'WASHC1', 'score': 6.38}, {'connected_gene': 'GC09M000242', 'score': 0.39}, {'connected_gene': 'GC09P000333', 'score': 0.31}, {'connected_gene': 'DOCK8', 'score': 0.16}]
chr9	GH09I000800	800362	802851	0.69	[{'connected_gene': 'WASHC1', 'score': 4.44}, {'connected_gene': 'GC09P000774', 'score': 0.31}, {'connected_gene': 'LOC105375949', 'score': 0.31}]
chr9	GH09I000063	63001	64200	0.77	[{'connected_gene': 'WASHC1', 'score': 5.6}, {'connected_gene': 'GC09P000065', 'score': 0.77}, {'connected_gene': 'PGM5P3', 'score': 0.44}, {'connected_gene': 'GC09P000057', 'score': 0.44}]
chr9	GH09I000030	29781	29840	0.5	[{'connected_gene': 'WASHC1', 'score': 550.77}, {'connected_gene': 'MIR1302-9', 'score': 550.77}, {'connected_gene': 'ENSG00000227518', 'score': 0.77}, {'connected_gene': 'GC09M000028', 'score': 0.39}]
chr9	GH09I000021	21189	21800	0.2	[{'connected_gene': 'GC09M000020', 'score': 550.77}, {'connected_gene': 'GC09P000023', 'score': 0.77}, {'connected_gene': 'LOC102724813', 'score': 0.44}, {'connected_gene': 'WASHC1', 'score': 0.44}, {'connected_gene': 'LOC102724727', 'score': 0.37}]