PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000413601	[[111222627, 111223204], [111225671, 111225831], [111230173, 111230393]]	[[111223192, 111223204], [111225671, 111225831], [111230173, 111230355]]
ENST00000480598	[[111225490, 111225831], [111230173, 111230511]]	None
NR_038099	[[111203459, 111204737], [111207395, 111207444], [111208737, 111208830], [111209440, 111209595], [111212427, 111212577], [111213011, 111213132], [111214606, 111214673], [111225671, 111225831], [111230173, 111230652]]	None
NM_001205288	[[111222627, 111223204], [111225671, 111225831], [111230173, 111230652]]	[[111223192, 111223204], [111225671, 111225831], [111230173, 111230355]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I110448	110448202	110450399	0.2	[{'connected_gene': 'LOC105373552', 'score': 550.77}, {'connected_gene': 'LIMS4', 'score': 0.34}, {'connected_gene': 'ENSG00000257207', 'score': 0.34}]
chr2	GH02I110455	110455201	110455400	0.2	[{'connected_gene': 'LOC105373552', 'score': 0.44}, {'connected_gene': 'LIMS4', 'score': 0.37}, {'connected_gene': 'ENSG00000257207', 'score': 0.37}]
chr2	GH02I110446	110446401	110447400	0.2	[{'connected_gene': 'LOC105373552', 'score': 550.77}, {'connected_gene': 'ENSG00000184115', 'score': 0.39}, {'connected_gene': 'LIMS4', 'score': 0.31}, {'connected_gene': 'ENSG00000257207', 'score': 0.31}]
chr2	GH02I110469	110469201	110469400	0.2	[{'connected_gene': 'LIMS4', 'score': 0.77}, {'connected_gene': 'ENSG00000257207', 'score': 0.77}, {'connected_gene': 'LOC105373552', 'score': 0.34}]
chr2	GH02I110465	110465002	110466399	0.2	[{'connected_gene': 'LIMS4', 'score': 0.44}, {'connected_gene': 'ENSG00000257207', 'score': 0.44}, {'connected_gene': 'LOC105373552', 'score': 0.37}]
chr2	GH02I110472	110472975	110473034	0.5	[{'connected_gene': 'LIMS4', 'score': 550.77}, {'connected_gene': 'ENSG00000257207', 'score': 550.77}, {'connected_gene': 'LOC105373552', 'score': 0.34}]
chr2	GH02I110471	110471800	110472601	0.5	[{'connected_gene': 'LIMS4', 'score': 550.77}, {'connected_gene': 'ENSG00000257207', 'score': 550.77}, {'connected_gene': 'LOC105373552', 'score': 0.34}]
chr2	GH02I110470	110469801	110470600	0.2	[{'connected_gene': 'LIMS4', 'score': 0.77}, {'connected_gene': 'ENSG00000257207', 'score': 0.77}, {'connected_gene': 'LOC105373552', 'score': 0.34}]
chr2	GH02I110481	110481400	110481601	0.2	[{'connected_gene': 'LIMS4', 'score': 0.44}, {'connected_gene': 'ENSG00000257207', 'score': 0.44}, {'connected_gene': 'LOC102724875', 'score': 0.39}]
chr2	GH02I110482	110482801	110483000	0.2	[{'connected_gene': 'LIMS4', 'score': 0.44}, {'connected_gene': 'ENSG00000257207', 'score': 0.44}, {'connected_gene': 'LOC102724875', 'score': 0.39}]