PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
PARP1	3	HIST1H3A	3	enzymatic study	Bonfiglio JJ (2017)	1
XPC	1	H2AFX	1	affinity chromatography technology, affinity chromatography technology	Ray A (2009), Huttlin EL (2017)	2
PARP1	3	HIST1H2BC	0	enzymatic study	Bonfiglio JJ (2017)	1
TFAP4	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Ku WC (2009), Ku WC (2009)	2
H3F3A	1	HIST1H1B	4	affinity chromatography technology	Heo K (2007)	1
CD44	1	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
XPC	1	H2AFY2	0	affinity chromatography technology	Huttlin EL (2017)	1
CHD1L	5	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
RPA2	0	PARP2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
8339	0	POLB	0	bioid	Lambert JP (2015)	1
PARP2	0	HIST1H2BC	0	enzymatic study	Bonfiglio JJ (2017)	1
UHRF1	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Achour M (2008), Achour M (2008), Achour M (2009), Unoki M (2004), Unoki M (2004), Ma H (2012)	6
SDC1	0	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
PARP1	3	APLF	3	pull down, pull down, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kanno S (2007), Kanno S (2007), Eustermann S (2010), Ahel I (2008), Huttlin EL (2015), Gibbs-Seymour I (2016), Huttlin EL (2017)	7
POLB	0	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NAA40	3	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
PARP2	0	HIST1H1B	4	enzymatic study	Bonfiglio JJ (2017)	1
FOXA1	2	HIST1H3A	3	affinity chromatography technology	Jozwik KM (2016)	1
MSH6	2	H3F3A	1	affinity chromatography technology	Hein MY (2015)	1
SIRT6	2	TRIM28	1	affinity chromatography technology	Simeoni F (2013)	1
UHRF1	3	MSH6	2	affinity chromatography technology	Ferry L (2017)	1
CHD1L	5	RPA2	0	affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Ahel D (2009)	2
SIRT6	2	XRCC6	3	affinity chromatography technology, affinity chromatography technology	McCord RA (2009), McCord RA (2009)	2
H2AFX	1	CBX5	3	affinity chromatography technology	Dittmann K (2011)	1
H2AFY2	0	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
HIST1H2BA	0	PARP1	3	pull down, affinity chromatography technology, affinity chromatography technology	Messner S (2010), Huttlin EL (2015), Huttlin EL (2017)	3
H3F3A	1	XRCC6	3	affinity chromatography technology	Drane P (2010)	1
WDR76	1	PARP1	3	affinity chromatography technology, affinity chromatography technology	Gallina I (2015), Huttlin EL (2017)	2
PARP2	0	HIST3H3	0	enzymatic study	Bonfiglio JJ (2017)	1
HDAC1	4	TRIM28	1	affinity chromatography technology, affinity chromatography technology, biochemical	Allouch A (2011), Chen L (2012), Kristensen AR (2012)	3
BRCA2	6	PARP2	0	genetic interference	Ward TA (2017)	1
RPA2	0	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Shao RG (1999), Shao RG (1999), Marechal A (2014), Wan C (2015)	4
APLF	3	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Gibbs-Seymour I (2016), Huttlin EL (2017)	3
H2AFX	1	HIST1H3A	3	affinity chromatography technology, imaging technique	Lee HS (2010), Soldi M (2013)	2
MACROD1	0	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
RPA4	0	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RNF146	4	CHD1L	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SIRT6	2	HSPA2	3	affinity chromatography technology	Simeoni F (2013)	1
UHRF1	3	HIST3H3	0	pull down, x-ray crystallography, pull down, x-ray crystallography, unspecified method, unspecified method, unspecified method, unspecified method, unspecified method	Xie S (2012), Xie S (2012), Cheng J (2013), Cheng J (2013), Li X (2012), Rothbart SB (2013), Gelato KA (2014), Gelato KA (2014), Qin W (2015)	9
8339	0	WDR76	1	bioid	Lambert JP (2015)	1
HIST1H3A	3	FANCD2	3	pull down, enzymatic study, pull down	Sato K (2012), Sato K (2012), Sato K (2012)	3
HDAC1	4	HIST3H3	0	enzymatic study, unspecified method	Shi Y (2003), Vermeulen M (2010)	2
VSX2	1	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
MACROD1	0	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
XRCC6	3	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
RPA4	0	RPA2	0	two hybrid, affinity chromatography technology	Keshav KF (1995), Keshav KF (1995)	2
PARP1	3	7515	0	affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gueven N (2004), Gueven N (2004), Masson M (1998), Masson M (1998), Cazzalini O (2010), Lee CH (2010), Leppard JB (2003)	7
H3F3A	1	PARP2	0	affinity chromatography technology, enzymatic study	Drane P (2010), Bonfiglio JJ (2017)	2
APLF	3	PARP2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FANCD2	3	PARP2	0	genetic interference	Ward TA (2017)	1
CBX5	3	H2AFY2	0	biochemical	Havugimana PC (2012)	1
CBX5	3	TRIM28	1	affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, pull down, unspecified method, unspecified method, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nielsen AL (2002), Cammas F (2002), Cammas F (2002), Nielsen AL (2001), Lechner MS (2000), Lechner MS (2005), Lechner MS (2005), Lechner MS (2005), Lechner MS (2005), Ryan RF (1999), Rosnoblet C (2011), Hu C (2012), Hu C (2012), White D (2012), Nozawa RS (2010), Kubota S (2013), Kubota S (2013), Kubota S (2013), Garvin AJ (2013), Huttlin EL (2017), Hauri S (2016)	21
PARP1	3	HMGN2	1	enzymatic study	Bonfiglio JJ (2017)	1
SIRT6	2	MSH6	2	affinity chromatography technology	Simeoni F (2013)	1
PARP2	0	TRIM28	1	affinity chromatography technology, affinity chromatography technology	Quenet D (2008), Quenet D (2008)	2
RNF146	4	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FANCD2	3	H2AFX	1	affinity chromatography technology, affinity chromatography technology	Bogliolo M (2007), Bogliolo M (2007)	2
RNF146	4	PARP1	3	affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology	Kang HC (2011), Kang HC (2011), Kang HC (2011), Kang HC (2011), Huttlin EL (2015), Huttlin EL (2017)	6
FOXA1	2	H2AFX	1	affinity chromatography technology	Jozwik KM (2016)	1
HIST1H2BA	0	H2AFY2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
WDR76	1	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
H3F3A	1	PARP1	3	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study	Heo K (2007), Messner S (2010), Drane P (2010), Drane P (2010), Bonfiglio JJ (2017)	5
TRIM28	1	PARP1	3	affinity chromatography technology	Quenet D (2008)	1
8339	0	UHRF1	3	bioid	Lambert JP (2015)	1
CBX5	3	HIST1H1B	4	affinity chromatography technology, fluorescent resonance energy transfe	Hale TK (2006), Hale TK (2006)	2
HPF1	1	PARP2	0	affinity chromatography technology, pull down, pull down	Gibbs-Seymour I (2016), Gibbs-Seymour I (2016), Bonfiglio JJ (2017)	3
XPC	1	PARP1	3	affinity chromatography technology	Huttlin EL (2017)	1
XRCC6	3	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
HPF1	1	HMGN2	1	pull down	Bonfiglio JJ (2017)	1
LHX9	2	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
HMGN2	1	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
FANCD2	3	BRCA2	6	imaging technique, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology	Wang X (2004), Wang X (2004), Hussain S (2004), Hussain S (2004), Hejna J (2008), Wilson JB (2010), Wilson JB (2010), Wilson JB (2008), Wilson JB (2008), Wang X (2004), Zhi G (2009), Zhi G (2009), Siddiqui MQ (2017), Siddiqui MQ (2017), Siddiqui MQ (2017)	15
8339	0	7515	0	bioid	Lambert JP (2015)	1
PARP1	3	BRCA2	6	genetic interference, genetic interference	Srivas R (2016), Ward TA (2017)	2
FOXA1	2	UHRF1	3	affinity chromatography technology	Jozwik KM (2016)	1
HPF1	1	H1F0	3	pull down	Bonfiglio JJ (2017)	1
FOXA1	2	TFAP4	3	affinity chromatography technology	Li X (2015)	1
HIST1H2BA	0	CHD1L	5	affinity chromatography technology	Huttlin EL (2015)	1
HIST1H3A	3	XPC	1	bioid, affinity chromatography technology	Lambert JP (2015), Huttlin EL (2017)	2
RPA2	0	7515	0	affinity chromatography technology, affinity chromatography technology	Marechal A (2014), Huttlin EL (2017)	2
HIST1H3A	3	MSH6	2	unspecified method, pull down	Sankaran SM (2016), Sankaran SM (2016)	2
CHD1L	5	CBX5	3	affinity chromatography technology	Ahel D (2009)	1
CBX5	3	HIST3H3	0	affinity chromatography technology, unspecified method, x-ray crystallography, pull down, unspecified method, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, pull down	Quivy JP (2004), Kaustov L (2011), Kaustov L (2011), Bartke T (2010), Li X (2012), Li X (2012), Vermeulen M (2007), Kubota S (2013), Vermeulen M (2010), Vermeulen M (2010), Lacroix M (2008)	11
HIST1H2BA	0	APLF	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD1L	5	H2AFX	1	affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Huttlin EL (2017)	2
MSH6	2	PARP2	0	affinity chromatography technology	Hein MY (2015)	1
PARP1	3	HIST3H3	0	enzymatic study	Bonfiglio JJ (2017)	1
HIST1H2BA	0	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology	Li X (2014), Huttlin EL (2015), Huttlin EL (2017)	3
CHD1L	5	PARP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Ahel D (2009), Brockschmidt A (2011), Kulkarni A (2013), Huttlin EL (2017)	5
HIST1H2BA	0	PARP2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HPF1	1	PARP1	3	affinity chromatography technology, affinity chromatography technology, pull down, pull down	Gibbs-Seymour I (2016), Gibbs-Seymour I (2016), Gibbs-Seymour I (2016), Bonfiglio JJ (2017)	4
FEN1	1	PARP2	0	genetic interference	Ward TA (2017)	1
HDAC1	4	H3F3A	1	affinity chromatography technology	Hein MY (2015)	1
PARP1	3	CETN1	0	affinity chromatography technology	Wu T (2013)	1
HIST1H2BA	0	7515	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
H2AFX	1	HIST1H2BC	0	affinity chromatography technology	Du YC (2006)	1
TRIM28	1	HIST3H3	0	affinity chromatography technology	Kubota S (2013)	1
XRCC6	3	MSH6	2	two hybrid, affinity chromatography technology, affinity chromatography technology, biochemical	Shahi A (2011), Shahi A (2011), Shahi A (2011), Kristensen AR (2012)	4
H3F3A	1	TRIM28	1	affinity chromatography technology	Heo K (2007)	1
PARP1	3	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study	Hassa PO (2005), Hassa PO (2005), Hang CT (2010), Rajamohan SB (2009)	4
RPA2	0	PARP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Marechal A (2014), Huttlin EL (2015), Huttlin EL (2017)	3
XRCC6	3	7515	0	affinity chromatography technology	Huttlin EL (2017)	1
HIST1H3A	3	WDR76	1	bioid	Lambert JP (2015)	1
WDR76	1	XRCC6	3	affinity chromatography technology	Gallina I (2015)	1
APLF	3	HIST3H3	0	affinity chromatography technology, affinity chromatography technology	Mehrotra PV (2011), Gibbs-Seymour I (2016)	2
FOXB1	1	7515	0	affinity chromatography technology	Li X (2015)	1
WDR76	1	FEN1	1	affinity chromatography technology	Gallina I (2015)	1
PARP2	0	H1F0	3	enzymatic study	Bonfiglio JJ (2017)	1
ZNF428	1	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
MACROD1	0	XRCC6	3	affinity chromatography technology, affinity chromatography technology	Wu Z (2015), Wu Z (2015)	2
CHD1L	5	7515	0	affinity chromatography technology, affinity chromatography technology	Ahel D (2009), Huttlin EL (2017)	2
PARP2	0	HSPA2	3	pull down, affinity chromatography technology, affinity chromatography technology	Quenet D (2009), Quenet D (2009), Quenet D (2009)	3
FOXA1	2	PARP2	0	affinity chromatography technology	Jozwik KM (2016)	1
CHD1L	5	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Ahel D (2009), Ahel D (2009), Kulkarni A (2013), Huttlin EL (2017)	5
SPIN2B	0	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
POLB	0	PARP2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC1	4	PARP2	0	affinity chromatography technology	Hein MY (2015)	1
FEN1	1	PARP1	3	genetic interference	Ward TA (2017)	1
PARP1	3	HIST1H1B	4	enzymatic study, enzymatic study	Gibbs-Seymour I (2016), Bonfiglio JJ (2017)	2
XPC	1	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
CDX1	3	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
PARP1	3	POLB	0	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cazzalini O (2010), Cazzalini O (2010), Lee CH (2010), Huttlin EL (2015), Huttlin EL (2017)	5
RNF146	4	XRCC6	3	affinity chromatography technology, affinity chromatography technology, enzymatic study	Kang HC (2011), Kang HC (2011), Kang HC (2011)	3
H2AFX	1	PARP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Du YC (2006), Du YC (2006), Heo K (2008), Heo K (2008), Heo K (2008), Yang X (2010), Yang X (2010), Huttlin EL (2017)	8
CHD1L	5	APLF	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ahel D (2009), Kulkarni A (2013), Huttlin EL (2015), Huttlin EL (2017)	4
TRIM28	1	UHRF1	3	affinity chromatography technology, affinity chromatography technology	Quenneville S (2011), Quenneville S (2011)	2
HPF1	1	HIST1H1B	4	pull down, pull down	Bonfiglio JJ (2017), Gibbs-Seymour I (2016)	2
APLF	3	H2AFY2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TFAP4	3	HPF1	1	affinity chromatography technology	Ku WC (2009)	1
PARP1	3	HSPA2	3	affinity chromatography technology, enzymatic study	Quenet D (2009), Quenet D (2009)	2
PARP2	0	CBX5	3	affinity chromatography technology, affinity chromatography technology	Quenet D (2008), Quenet D (2008)	2
SIRT6	2	PARP2	0	affinity chromatography technology	Huttlin EL (2015)	1
FOXB1	1	CHD1L	5	affinity chromatography technology	Li X (2015)	1
POLB	0	7515	0	two hybrid, pull down, pull down, far western blotting, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wang L (2004), Fan J (2004), Kubota Y (1996), Kubota Y (1996), Bhattacharyya N (2001), Bhattacharyya N (2001), Luo H (2004), Huttlin EL (2015), Hein MY (2015), Fang Q (2014), Fang Q (2014), Huttlin EL (2017)	12
HIST1H2BA	0	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PARP1	3	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, enzymatic study, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Ju BG (2006), Galande S (1999), Galande S (1999), Galande S (1999), Idogawa M (2007), Li B (2004), Li B (2004), Yin H (2006), Yin H (2006), Wu T (2013), Huttlin EL (2017)	11
PARP2	0	UHRF1	3	affinity chromatography technology	De Vos M (2014)	1
FOXA1	2	NAA40	3	affinity chromatography technology	Li X (2015)	1
CETN1	0	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
HIST1H3A	3	HIST1H1B	4	imaging technique	Soldi M (2013)	1
APLF	3	7515	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Gibbs-Seymour I (2016), Huttlin EL (2017)	3
H2AFX	1	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology	Mischo HE (2005), Mischo HE (2005), Heo K (2008), Heo K (2008), Heo K (2008), Lee HS (2010), Kobayashi J (2012), Huttlin EL (2017)	8
POLB	0	APLF	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PARP1	3	H1F0	3	enzymatic study	Bonfiglio JJ (2017)	1
RNF146	4	7515	0	affinity chromatography technology, affinity chromatography technology, enzymatic study	Kang HC (2011), Kang HC (2011), Kang HC (2011)	3
HPF1	1	HIST3H3	0	affinity chromatography technology, affinity chromatography technology, pull down	Gibbs-Seymour I (2016), Gibbs-Seymour I (2016), Bonfiglio JJ (2017)	3
RPA2	0	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
H2AFX	1	BRCA2	6	affinity chromatography technology, affinity chromatography technology, pull down	Heo K (2008), Heo K (2008), Krum SA (2010)	3
7515	0	PARP2	0	affinity chromatography technology, affinity chromatography technology	Schreiber V (2002), Schreiber V (2002)	2
PARP1	3	UHRF1	3	affinity chromatography technology, pull down	De Vos M (2014), De Vos M (2014)	2
RPA2	0	TRIM28	1	affinity chromatography technology	Marechal A (2014)	1
PARP1	3	PARP2	0	affinity chromatography technology	Schreiber V (2002)	1
CBX5	3	XRCC6	3	two hybrid, pull down, affinity chromatography technology	Song K (2001), Song K (2001), Song K (2001)	3
SDC2	0	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
SDC2	0	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
WDR76	1	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
H2AFX	1	TRIM28	1	affinity chromatography technology	Dittmann K (2011)	1
FOXB1	1	NAA40	3	affinity chromatography technology	Li X (2015)	1
SIRT6	2	XPC	1	affinity chromatography technology	Huttlin EL (2015)	1
8339	0	CHD1L	5	bioid	Lambert JP (2015)	1
TFAP4	3	PARP2	0	affinity chromatography technology	Ku WC (2009)	1
NAA40	3	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
RPA4	0	PARP2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD1L	5	PARP2	0	affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Huttlin EL (2017)	2
SIRT6	2	HDAC1	4	affinity chromatography technology	Simeoni F (2013)	1
PARP1	3	MACROD1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Wu Z (2015), Wu Z (2015), Wu Z (2015), Wu Z (2015), Huttlin EL (2017)	5
PARP2	0	TNP2	0	pull down, pull down, affinity chromatography technology	Quenet D (2009), Quenet D (2009), Quenet D (2009)	3
MSH6	2	FEN1	1	biochemical	Wan C (2015)	1
FOXA1	2	RPA2	0	affinity chromatography technology	Li X (2015)	1
8339	0	PARP2	0	bioid	Lambert JP (2015)	1
FOXB1	1	RPA2	0	affinity chromatography technology	Li X (2015)	1
HIST1H3A	3	XRCC6	3	affinity chromatography technology, bioid	Fnu S (2011), Lambert JP (2015)	2
SPIN2B	0	PARP2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CETN1	0	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
RPA4	0	PARP1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FANCD2	3	PARP1	3	genetic interference	Ward TA (2017)	1
ZNF428	1	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
FOXA1	2	CBX5	3	affinity chromatography technology	Jozwik KM (2016)	1
H3F3A	1	CBX5	3	affinity chromatography technology	Heo K (2007)	1
HPF1	1	H3F3A	1	pull down	Bonfiglio JJ (2017)	1
SPIN2B	0	WDR76	1	affinity chromatography technology	Huttlin EL (2015)	1
CBX5	3	HIST1H3A	3	affinity chromatography technology, pull down, pull down, unspecified method, imaging technique, bioid, affinity chromatography technology	Terada Y (2006), Lavigne M (2009), Lavigne M (2009), Dawson MA (2009), Dawson MA (2009), Lambert JP (2015), Huttlin EL (2017)	7
FOXB1	1	PARP2	0	affinity chromatography technology	Li X (2015)	1
RNF146	4	PARP2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kang HC (2011), Huttlin EL (2015), Huttlin EL (2017)	3
APLF	3	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
H2AFX	1	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
HIST1H3A	3	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology	Nishioka K (2002), Li X (2014), Hein MY (2015)	3
HPF1	1	HIST1H3A	3	pull down	Bonfiglio JJ (2017)	1
8339	0	XPC	1	bioid	Lambert JP (2015)	1
MACROD1	0	H2AFX	1	affinity chromatography technology	Huttlin EL (2017)	1
HPF1	1	HIST1H2BC	0	pull down	Bonfiglio JJ (2017)	1
TRIM28	1	HIST1H3A	3	imaging technique	Li X (2010)	1
UHRF1	3	HIST1H3A	3	unspecified method, enzymatic study, bioid	Zhang J (2011), Karagianni P (2008), Lambert JP (2015)	3
HIST1H3A	3	PARP2	0	bioid, enzymatic study, affinity chromatography technology	Lambert JP (2015), Bonfiglio JJ (2017), Huttlin EL (2017)	3
HIST1H3A	3	H2AFY2	0	bioid	Lambert JP (2015)	1
CETN1	0	H2AFX	1	affinity chromatography technology	Huttlin EL (2017)	1