PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000531207	[[76092356, 76092418], [76114703, 76114965], [76119520, 76119666], [76121905, 76125663]]	None
ENST00000530460	[[76092359, 76094821]]	[[76092872, 76093505]]
ENST00000321844	[[76092368, 76093254], [76114703, 76119180]]	[[76092872, 76093254], [76114703, 76115086]]
ENST00000529331	[[76092848, 76093337], [76114703, 76114914]]	[[76092872, 76093337], [76114703, 76114802]]
ENST00000531785	[[76092855, 76093337], [76106017, 76106143]]	None
ENST00000534586	[[76093828, 76093948], [76119520, 76119666], [76121905, 76122350]]	None

Promoter

Chrom	Start	End	Description
chr11	76092353	76092400	CAGE_peak_1_at_LOC100506127_5end
chr11	76092440	76092451	CAGE_peak_2_at_LOC100506127_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I075838	75838199	75842363	0.59	[{'connected_gene': 'DGAT2', 'score': 18.66}, {'connected_gene': 'ENSG00000254814', 'score': 11.92}, {'connected_gene': 'ENSG00000255421', 'score': 10.96}, {'connected_gene': 'MOGAT2', 'score': 10.59}, {'connected_gene': 'GVQW3', 'score': 5.71}, {'connected_gene': 'GC11M075838', 'score': 0.77}, {'connected_gene': 'ENSG00000199362', 'score': 0.77}, {'connected_gene': 'UVRAG', 'score': 0.31}, {'connected_gene': 'PPP1R1AP1', 'score': 0.19}]
chr11	GH11I076379	76379342	76382989	2.05	[{'connected_gene': 'THAP12', 'score': 555.6}, {'connected_gene': 'GVQW3', 'score': 555.24}, {'connected_gene': 'TSKU', 'score': 14.67}, {'connected_gene': 'ENSG00000261578', 'score': 12.5}, {'connected_gene': 'EMSY', 'score': 11.02}, {'connected_gene': 'ENSG00000255363', 'score': 10.78}, {'connected_gene': 'LOC101928837', 'score': 10.71}, {'connected_gene': 'SNORD15B', 'score': 9.87}, {'connected_gene': 'ENSG00000255135', 'score': 5.62}]
chr11	GH11I076860	76860048	76862590	2.02	[{'connected_gene': 'ACER3', 'score': 565.23}, {'connected_gene': 'EMSY', 'score': 50.01}, {'connected_gene': 'ENSG00000271757', 'score': 23.29}, {'connected_gene': 'RSF1', 'score': 20.4}, {'connected_gene': 'ENSG00000272301', 'score': 19.95}, {'connected_gene': 'GVQW3', 'score': 19.24}, {'connected_gene': 'ENSG00000255135', 'score': 13.48}, {'connected_gene': 'THAP12', 'score': 10.14}, {'connected_gene': 'ENSG00000254988', 'score': 7.24}]
chr11	GH11I076596	76596226	76598189	0.43	[{'connected_gene': 'ACER3', 'score': 8.78}, {'connected_gene': 'GVQW3', 'score': 6.96}, {'connected_gene': 'ENSG00000254755', 'score': 0.44}, {'connected_gene': 'ENSG00000255479', 'score': 0.31}]
chr11	GH11I076614	76614401	76618110	0.94	[{'connected_gene': 'LRRC32', 'score': 12.84}, {'connected_gene': 'ENSG00000254975', 'score': 12.83}, {'connected_gene': 'ENSG00000254810', 'score': 11.92}, {'connected_gene': 'LOC107984360', 'score': 11.92}, {'connected_gene': 'GVQW3', 'score': 4.48}, {'connected_gene': 'ENSG00000255363', 'score': 0.39}, {'connected_gene': 'LOC101928813', 'score': 0.39}, {'connected_gene': 'ENSG00000255479', 'score': 0.39}, {'connected_gene': 'ENSG00000254755', 'score': 0.31}]
chr11	GH11I076601	76601427	76605926	1.08	[{'connected_gene': 'LRRC32', 'score': 12.7}, {'connected_gene': 'ENSG00000254975', 'score': 12.69}, {'connected_gene': 'ENSG00000254810', 'score': 12.12}, {'connected_gene': 'LOC107984360', 'score': 12.12}, {'connected_gene': 'GVQW3', 'score': 4.52}, {'connected_gene': 'ENSG00000254755', 'score': 0.39}, {'connected_gene': 'ENSG00000255479', 'score': 0.34}]
chr11	GH11I076368	76368997	76370196	0.4	[{'connected_gene': 'GVQW3', 'score': 7.26}, {'connected_gene': 'ENSG00000255135', 'score': 5.99}, {'connected_gene': 'WNT11', 'score': 4.79}, {'connected_gene': 'THAP12', 'score': 0.39}, {'connected_gene': 'LOC105369395', 'score': 0.17}]
chr11	GH11I075857	75857689	75859850	0.56	[{'connected_gene': 'GVQW3', 'score': 4.58}, {'connected_gene': 'GC11M075838', 'score': 0.34}, {'connected_gene': 'ENSG00000199362', 'score': 0.34}, {'connected_gene': 'UVRAG', 'score': 0.26}, {'connected_gene': 'PPP1R1AP1', 'score': 0.23}]
chr11	GH11I076525	76525097	76525246	0.46	[{'connected_gene': 'GVQW3', 'score': 15.91}, {'connected_gene': 'PIR57504', 'score': 0.22}, {'connected_gene': 'EMSY', 'score': 0.18}]
chr11	GH11I076454	76454159	76456534	0.74	[{'connected_gene': 'GVQW3', 'score': 6.05}, {'connected_gene': 'EMSY', 'score': 0.39}, {'connected_gene': 'PIR57504', 'score': 0.13}]
chr11	GH11I076453	76453289	76454099	0.2	[{'connected_gene': 'GVQW3', 'score': 6.16}, {'connected_gene': 'EMSY', 'score': 0.44}, {'connected_gene': 'PIR57504', 'score': 0.13}]
chr11	GH11I076338	76338201	76340461	0.76	[{'connected_gene': 'GVQW3', 'score': 6.37}, {'connected_gene': 'ENSG00000255135', 'score': 5.73}, {'connected_gene': 'THAP12', 'score': 0.26}, {'connected_gene': 'LOC105369395', 'score': 0.23}]
chr11	GH11I076621	76621200	76622993	0.31	[{'connected_gene': 'GVQW3', 'score': 4.55}, {'connected_gene': 'ENSG00000255479', 'score': 0.77}, {'connected_gene': 'ENSG00000255363', 'score': 0.44}, {'connected_gene': 'LOC101928813', 'score': 0.44}, {'connected_gene': 'ENSG00000254755', 'score': 0.29}]
chr11	GH11I076233	76233278	76237530	1.73	[{'connected_gene': 'TRP-TGG2-1', 'score': 550.77}, {'connected_gene': 'TRP-AGG2-4', 'score': 550.77}, {'connected_gene': 'PIR59119', 'score': 550.77}, {'connected_gene': 'GC11M076236', 'score': 550.77}, {'connected_gene': 'EMSY', 'score': 34.32}, {'connected_gene': 'RPS3', 'score': 23.48}, {'connected_gene': 'WNT11', 'score': 13.18}, {'connected_gene': 'GVQW3', 'score': 11.62}, {'connected_gene': 'SNORD15B', 'score': 11.59}, {'connected_gene': 'ENSG00000272301', 'score': 11.12}, {'connected_gene': 'ENSG00000255362', 'score': 6.8}]
chr11	GH11I076370	76370696	76372000	1	[{'connected_gene': 'ENSG00000255135', 'score': 22.56}, {'connected_gene': 'EMSY', 'score': 10.47}, {'connected_gene': 'GVQW3', 'score': 8.45}, {'connected_gene': 'THAP12', 'score': 0.44}, {'connected_gene': 'LOC105369395', 'score': 0.17}]
chr11	GH11I076385	76385492	76386606	0.77	[{'connected_gene': 'ENSG00000255135', 'score': 10.66}, {'connected_gene': 'EMSY', 'score': 10.66}, {'connected_gene': 'GVQW3', 'score': 0.77}, {'connected_gene': 'ENSG00000272301', 'score': 0.77}]
chr11	GH11I076587	76587246	76590414	1.02	[{'connected_gene': 'ENSG00000254810', 'score': 11.93}, {'connected_gene': 'LOC107984360', 'score': 11.93}, {'connected_gene': 'GVQW3', 'score': 5.79}, {'connected_gene': 'ENSG00000255135', 'score': 5.41}, {'connected_gene': 'ENSG00000254755', 'score': 0.77}, {'connected_gene': 'PIR34395', 'score': 0.44}]
chr11	GH11I076591	76591105	76593410	0.31	[{'connected_gene': 'ENSG00000254755', 'score': 550.77}, {'connected_gene': 'ENSG00000254810', 'score': 11.94}, {'connected_gene': 'LOC107984360', 'score': 11.94}, {'connected_gene': 'GVQW3', 'score': 5.31}, {'connected_gene': 'ENSG00000255479', 'score': 0.29}]
chr11	GH11I076046	76046993	76049575	0.82	[{'connected_gene': 'ENSG00000255434', 'score': 11.58}, {'connected_gene': 'LOC105369391', 'score': 10.84}, {'connected_gene': 'ENSG00000255421', 'score': 10.75}, {'connected_gene': 'GVQW3', 'score': 10.72}, {'connected_gene': 'THAP12', 'score': 10.67}, {'connected_gene': 'ENSG00000271757', 'score': 10.07}, {'connected_gene': 'EMSY', 'score': 9.98}, {'connected_gene': 'MAP6', 'score': 9.93}, {'connected_gene': 'ENSG00000272301', 'score': 9.73}, {'connected_gene': 'PIR47539', 'score': 0.28}, {'connected_gene': 'UVRAG', 'score': 0.07}]
chr11	GH11I076573	76573977	76580756	1.39	[{'connected_gene': 'ENSG00000255135', 'score': 9.18}, {'connected_gene': 'GVQW3', 'score': 5.25}, {'connected_gene': 'PIR57504', 'score': 0.44}, {'connected_gene': 'EMSY', 'score': 0.12}]
chr11	GH11I076390	76390899	76391644	0.2	[{'connected_gene': 'ENSG00000271757', 'score': 550.77}, {'connected_gene': 'ENSG00000272301', 'score': 550.77}, {'connected_gene': 'GVQW3', 'score': 18.07}, {'connected_gene': 'ENSG00000255135', 'score': 11.08}, {'connected_gene': 'EMSY', 'score': 11.08}]