PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000576655	[[49927005, 49927266], [49928709, 49928746], [49929666, 49930870], [49931202, 49931376], [49931875, 49932075]]	[[49929687, 49930870], [49931202, 49931376], [49931875, 49932075]]
NM_001195256	[[49929687, 49930870], [49931202, 49931376], [49931875, 49932075]]	[[49929687, 49930870], [49931202, 49931376], [49931875, 49932075]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I049427	49427820	49428800	1	[{'connected_gene': 'PRR12', 'score': 5.4}, {'connected_gene': 'PTH2', 'score': 0.77}, {'connected_gene': 'GFY', 'score': 0.44}, {'connected_gene': 'SLC17A7', 'score': 0.39}]
chr19	GH19I049424	49424024	49424153	0.76	[{'connected_gene': 'POLD1', 'score': 30.63}, {'connected_gene': 'ALDH16A1', 'score': 15.57}, {'connected_gene': 'SNORD35A', 'score': 13.85}, {'connected_gene': 'SNORD35B', 'score': 13.3}, {'connected_gene': 'IRF3', 'score': 12.35}, {'connected_gene': 'BCL2L12', 'score': 11.88}, {'connected_gene': 'NUP62', 'score': 11.33}, {'connected_gene': 'BAX', 'score': 11.05}, {'connected_gene': 'RPS11', 'score': 10.62}, {'connected_gene': 'RPL13A', 'score': 10.46}, {'connected_gene': 'MED25', 'score': 10.11}, {'connected_gene': 'GFY', 'score': 0.77}, {'connected_gene': 'PTH2', 'score': 0.77}]
chr19	GH19I049426	49426304	49426493	1.31	[{'connected_gene': 'PTH2', 'score': 550.77}, {'connected_gene': 'GFY', 'score': 550.44}, {'connected_gene': 'SLC17A7', 'score': 0.37}]
chr19	GH19I049425	49423341	49423400	0.61	[{'connected_gene': 'PTH2', 'score': 550.77}, {'connected_gene': 'GFY', 'score': 0.77}]
chr19	GH19I049422	49422824	49422973	0.92	[{'connected_gene': 'GFY', 'score': 550.77}, {'connected_gene': 'BCL2L12', 'score': 13.92}, {'connected_gene': 'PTOV1', 'score': 11.5}, {'connected_gene': 'SCAF1', 'score': 10.94}, {'connected_gene': 'PTH2', 'score': 0.77}]
chr19	GH19I049423	49423024	49423045	0.82	[{'connected_gene': 'GFY', 'score': 550.77}, {'connected_gene': 'BCL2L12', 'score': 13.92}, {'connected_gene': 'PTOV1', 'score': 11.5}, {'connected_gene': 'SCAF1', 'score': 10.94}, {'connected_gene': 'PTH2', 'score': 0.77}]
chr19	GH19I049420	49420842	49421313	1	[{'connected_gene': 'GFY', 'score': 550.77}, {'connected_gene': 'RRAS', 'score': 3.44}, {'connected_gene': 'AP2A1', 'score': 2.33}, {'connected_gene': 'NOSIP', 'score': 1.88}, {'connected_gene': 'RCN3', 'score': 1.76}, {'connected_gene': 'PRR12', 'score': 1.27}, {'connected_gene': 'TBC1D17', 'score': 1.23}, {'connected_gene': 'LOC105372433', 'score': 0.77}]
chr19	GH19I049421	49421544	49421693	0.64	[{'connected_gene': 'GFY', 'score': 550.77}, {'connected_gene': 'PRR12', 'score': 5.04}, {'connected_gene': 'PTH2', 'score': 0.77}]
chr19	GH19I049428	49422484	49422673	0.89	[{'connected_gene': 'GFY', 'score': 550.77}, {'connected_gene': 'PTH2', 'score': 0.77}]