Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000421967 [[48334753, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48342785, 48342848]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48342785, 48342802]]
ENST00000426689 [[48335486, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340014]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340006]]
ENST00000452211 [[48335572, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48341920, 48342124], [48342768, 48342795]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340006]]
ENST00000450160 [[48335590, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340013], [48342785, 48342848]] [[48336155, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340006]]
ENST00000426723 [[48335590, 48336293], [48338216, 48338319], [48339916, 48340013], [48342785, 48342848]] [[48336126, 48336293], [48338216, 48338319], [48339916, 48340006]]
ENST00000444069 [[48335648, 48336293], [48336564, 48336725], [48342768, 48342828]] None
ENST00000415644 [[48335686, 48336293], [48338216, 48338319], [48339916, 48340013], [48342842, 48342884]] [[48336126, 48336293], [48338216, 48338319], [48339916, 48340006]]
ENST00000415053 [[48335936, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48342016, 48342124], [48342768, 48342815]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340006]]
ENST00000442597 [[48336008, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48342842, 48342913]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340006]]
ENST00000447314 [[48336011, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48342842, 48342877]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338274]]
ENST00000418431 [[48336013, 48336293], [48336564, 48336725], [48337608, 48337726], [48338216, 48338319], [48339916, 48340013], [48342842, 48342877]] [[48337670, 48337726], [48338216, 48338319], [48339916, 48340006]]
ENST00000451657 [[48336116, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340013], [48342842, 48343175]] [[48336155, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340006]]
ENST00000435684 [[48336144, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340013], [48342768, 48342857]] [[48336155, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340006]]
ENST00000425930 [[48336165, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48342759, 48342843]] [[48336165, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340006]]
ENST00000456495 [[48336624, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48341920, 48342124], [48342759, 48342852]] [[48336624, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340006]]
ENST00000454531 [[48336634, 48336725], [48337608, 48337726], [48338216, 48338319], [48339916, 48340013], [48342016, 48342124], [48342842, 48342877]] [[48337670, 48337726], [48338216, 48338319], [48339916, 48340006]]
ENST00000494209 [[48336694, 48337726], [48338216, 48338319], [48339916, 48340013], [48342842, 48342878]] None
ENST00000447724 [[48338245, 48338319], [48339916, 48340013], [48341766, 48342213], [48342759, 48342809]] [[48338245, 48338319], [48339916, 48340013], [48341766, 48341780]]
ENST00000484959 [[48338966, 48340013], [48342842, 48342886]] None
ENST00000302378 [[48339596, 48340013], [48342785, 48342858]] None
ENST00000495734 [[48339745, 48340013], [48342768, 48342901]] None
NM_001308427 [[48333806, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48342759, 48342901]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340006]]
NM_001308428 [[48333806, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48342768, 48342901]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340006]]
NM_001308433 [[48333806, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340013], [48342768, 48342901]] [[48336155, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340006]]
NM_005793 [[48333806, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48342785, 48342901]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48342785, 48342802]]
NM_001308430 [[48333806, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340013], [48342785, 48342901]] [[48336155, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340013], [48342785, 48342802]]
NM_001308426 [[48333806, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340013], [48342842, 48343175]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48339916, 48340006]]
NM_001308431 [[48333806, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340013], [48342842, 48343175]] [[48336155, 48336293], [48336564, 48336725], [48338216, 48338319], [48339916, 48340006]]
NM_001308435 [[48333806, 48336293], [48338216, 48338319], [48339916, 48340013], [48342842, 48343175]] [[48336126, 48336293], [48338216, 48338319], [48339916, 48340006]]
NM_001308434 [[48333806, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338319], [48342842, 48343175]] [[48336126, 48336293], [48336564, 48336725], [48337608, 48337648], [48338216, 48338274]]
Promoter
Chrom Start End Description
chr3 48342822 48342908 CAGE_peak_1_at_NME6_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr3 GH03I048237 48237291 48237580 0.7 [{'connected_gene': 'CDC25A', 'score': 11.31}, {'connected_gene': 'PLXNB1', 'score': 10.72}, {'connected_gene': 'NME6', 'score': 10.71}, {'connected_gene': 'CCDC51', 'score': 10.27}, {'connected_gene': 'TMA7', 'score': 10.27}, {'connected_gene': 'ATRIP', 'score': 10.27}, {'connected_gene': 'ENSG00000244380', 'score': 10.21}, {'connected_gene': 'FBXW12', 'score': 10.13}, {'connected_gene': 'SPINK8', 'score': 9.71}, {'connected_gene': 'GC03M048234', 'score': 0.77}, {'connected_gene': 'CAMP', 'score': 0.39}]
chr3 GH03I048186 48186625 48189204 2 [{'connected_gene': 'CDC25A', 'score': 550.77}, {'connected_gene': 'ZNF589', 'score': 82.07}, {'connected_gene': 'QRICH1', 'score': 44.11}, {'connected_gene': 'ATRIP', 'score': 33.13}, {'connected_gene': 'USP19', 'score': 26.82}, {'connected_gene': 'TMEM89', 'score': 22.87}, {'connected_gene': 'CCDC71', 'score': 22.24}, {'connected_gene': 'PTPN23', 'score': 19.6}, {'connected_gene': 'NME6', 'score': 19.49}, {'connected_gene': 'MRPS18AP1', 'score': 14.96}, {'connected_gene': 'DHX30', 'score': 11.21}, {'connected_gene': 'QARS', 'score': 10.84}, {'connected_gene': 'ENSG00000235236', 'score': 10.3}, {'connected_gene': 'PFKFB4', 'score': 7.13}, {'connected_gene': 'NDUFB1P1', 'score': 0.44}]
chr3 GH03I048232 48232182 48233200 1.1 [{'connected_gene': 'CDC25A', 'score': 11.46}, {'connected_gene': 'FBXW12', 'score': 10.98}, {'connected_gene': 'NME6', 'score': 10.5}, {'connected_gene': 'RNU7-128P', 'score': 10.43}, {'connected_gene': 'NDUFB1P1', 'score': 10.43}, {'connected_gene': 'ZNF589', 'score': 4.58}, {'connected_gene': 'GC03M048234', 'score': 0.44}, {'connected_gene': 'CAMP', 'score': 0.44}]
chr3 GH03I048235 48235945 48236861 0.75 [{'connected_gene': 'CDC25A', 'score': 11.45}, {'connected_gene': 'FBXW12', 'score': 10.98}, {'connected_gene': 'NDUFB1P1', 'score': 10.75}, {'connected_gene': 'RNU7-128P', 'score': 10.74}, {'connected_gene': 'PLXNB1', 'score': 10.72}, {'connected_gene': 'NME6', 'score': 10.71}, {'connected_gene': 'CCDC51', 'score': 10.57}, {'connected_gene': 'TMA7', 'score': 10.57}, {'connected_gene': 'ATRIP', 'score': 10.56}, {'connected_gene': 'ENSG00000244380', 'score': 10.21}, {'connected_gene': 'SPINK8', 'score': 9.71}, {'connected_gene': 'GC03M048234', 'score': 0.77}, {'connected_gene': 'CAMP', 'score': 0.39}]
chr3 GH03I049016 49016871 49023650 2.31 [{'connected_gene': 'DALRD3', 'score': 560.51}, {'connected_gene': 'GC03M049024', 'score': 550.77}, {'connected_gene': 'NDUFAF3', 'score': 550.77}, {'connected_gene': 'MIR425', 'score': 550.77}, {'connected_gene': 'MIR191', 'score': 550.77}, {'connected_gene': 'WDR6', 'score': 70.97}, {'connected_gene': 'ENSG00000235236', 'score': 54.16}, {'connected_gene': 'NICN1', 'score': 50.24}, {'connected_gene': 'ENSG00000223343', 'score': 41.28}, {'connected_gene': 'P4HTM', 'score': 40.21}, {'connected_gene': 'AMT', 'score': 39.47}, {'connected_gene': 'FCF1P2', 'score': 36.49}, {'connected_gene': 'QRICH1', 'score': 35.58}, {'connected_gene': 'RBM6', 'score': 33.32}, {'connected_gene': 'ZNF589', 'score': 31.51}, {'connected_gene': 'ATRIP', 'score': 27.01}, {'connected_gene': 'CCDC71', 'score': 20.54}, {'connected_gene': 'IP6K2', 'score': 13.52}, {'connected_gene': 'USP19', 'score': 12.5}, {'connected_gene': 'NME6', 'score': 11.81}, {'connected_gene': 'MRPS18AP1', 'score': 11.62}, {'connected_gene': 'ARIH2', 'score': 11.39}, {'connected_gene': 'QARS', 'score': 11.24}, {'connected_gene': 'ARIH2OS', 'score': 11.2}, {'connected_gene': 'TMEM89', 'score': 11.08}, {'connected_gene': 'ENSG00000271973', 'score': 10.17}, {'connected_gene': 'TRAIP', 'score': 9.95}, {'connected_gene': 'IP6K1', 'score': 9.66}, {'connected_gene': 'MST1', 'score': 4.47}]
chr3 GH03I047511 47511506 47514201 2.08 [{'connected_gene': 'ELP6', 'score': 550.77}, {'connected_gene': 'SETD2', 'score': 40.79}, {'connected_gene': 'NME6', 'score': 36.21}, {'connected_gene': 'MRPS18AP1', 'score': 30.71}, {'connected_gene': 'ZNF589', 'score': 28.64}, {'connected_gene': 'PTPN23', 'score': 23.28}, {'connected_gene': 'ATRIP', 'score': 23.0}, {'connected_gene': 'CCDC12', 'score': 21.85}, {'connected_gene': 'FCF1P2', 'score': 18.76}, {'connected_gene': 'BOLA2P2', 'score': 13.34}, {'connected_gene': 'NBEAL2', 'score': 12.75}, {'connected_gene': 'SCAP', 'score': 7.1}, {'connected_gene': 'PRSS45', 'score': 5.76}, {'connected_gene': 'CSPG5', 'score': 4.13}, {'connected_gene': 'GC03M047501', 'score': 0.39}, {'connected_gene': 'GC03M047502', 'score': 0.39}]
chr3 GH03I048400 48400994 48401163 0.96 [{'connected_gene': 'PLXNB1', 'score': 12.23}, {'connected_gene': 'FBXW12', 'score': 11.67}, {'connected_gene': 'CCDC51', 'score': 11.19}, {'connected_gene': 'TMA7', 'score': 11.19}, {'connected_gene': 'ATRIP', 'score': 11.16}, {'connected_gene': 'NME6', 'score': 11.08}, {'connected_gene': 'SHISA5', 'score': 11.05}, {'connected_gene': 'ENSG00000244380', 'score': 10.52}, {'connected_gene': 'SPINK8', 'score': 10.49}, {'connected_gene': 'RN7SL321P', 'score': 0.34}, {'connected_gene': 'LOC105377077', 'score': 0.31}]
chr3 GH03I048551 48551579 48566961 2.74 [{'connected_gene': 'PFKFB4', 'score': 551.86}, {'connected_gene': 'UCN2', 'score': 550.77}, {'connected_gene': 'TMA7', 'score': 37.63}, {'connected_gene': 'NME6', 'score': 29.47}, {'connected_gene': 'QRICH1', 'score': 23.29}, {'connected_gene': 'ATRIP', 'score': 22.64}, {'connected_gene': 'USP19', 'score': 21.6}, {'connected_gene': 'ZNF589', 'score': 16.52}, {'connected_gene': 'WDR6', 'score': 16.25}, {'connected_gene': 'TMEM89', 'score': 14.89}, {'connected_gene': 'MRPS18AP1', 'score': 14.81}, {'connected_gene': 'RHOA-IT1', 'score': 13.56}, {'connected_gene': 'CCDC71', 'score': 12.26}, {'connected_gene': 'COL7A1', 'score': 12.09}, {'connected_gene': 'ENSG00000244380', 'score': 11.23}, {'connected_gene': 'CCDC51', 'score': 11.11}, {'connected_gene': 'QARS', 'score': 10.85}, {'connected_gene': 'FBXW12', 'score': 10.36}, {'connected_gene': 'CDC25A', 'score': 9.84}, {'connected_gene': 'RNU7-128P', 'score': 9.16}, {'connected_gene': 'NDUFB1P1', 'score': 9.16}, {'connected_gene': 'TREX1', 'score': 6.93}, {'connected_gene': 'AMT', 'score': 5.89}, {'connected_gene': 'SLC26A6', 'score': 4.86}, {'connected_gene': 'ENSG00000272434', 'score': 4.29}, {'connected_gene': 'DALRD3', 'score': 3.93}, {'connected_gene': 'CCDC36', 'score': 3.78}, {'connected_gene': 'ARIH2', 'score': 3.57}, {'connected_gene': 'MIR6823', 'score': 0.44}]
chr3 GH03I048226 48226315 48227648 0.46 [{'connected_gene': 'ZNF589', 'score': 64.6}, {'connected_gene': 'CDC25A', 'score': 11.52}, {'connected_gene': 'NME6', 'score': 10.54}, {'connected_gene': 'RNU7-128P', 'score': 10.46}, {'connected_gene': 'NDUFB1P1', 'score': 10.46}, {'connected_gene': 'ATRIP', 'score': 10.26}, {'connected_gene': 'CCDC51', 'score': 10.26}, {'connected_gene': 'TMA7', 'score': 10.26}, {'connected_gene': 'ENSG00000244380', 'score': 10.19}, {'connected_gene': 'NCKIPSD', 'score': 9.52}, {'connected_gene': 'CAMP', 'score': 0.77}, {'connected_gene': 'GC03M048234', 'score': 0.39}]
chr3 GH03I048366 48366450 48366824 0.53 [{'connected_gene': 'ZNF589', 'score': 15.16}, {'connected_gene': 'SPINK8', 'score': 11.25}, {'connected_gene': 'MIR2115', 'score': 11.18}, {'connected_gene': 'NME6', 'score': 11.03}, {'connected_gene': 'PLXNB1', 'score': 10.73}, {'connected_gene': 'ATRIP', 'score': 10.34}, {'connected_gene': 'ENSG00000244380', 'score': 10.17}, {'connected_gene': 'TREX1', 'score': 10.01}, {'connected_gene': 'UCN2', 'score': 9.87}, {'connected_gene': 'PFKFB4', 'score': 9.87}, {'connected_gene': 'COL7A1', 'score': 9.86}, {'connected_gene': 'CDC25A', 'score': 9.52}, {'connected_gene': 'RNU7-128P', 'score': 9.12}, {'connected_gene': 'NDUFB1P1', 'score': 9.12}, {'connected_gene': 'MRPS18AP1', 'score': 4.51}, {'connected_gene': 'FBXW12', 'score': 0.44}]
chr3 GH03I048239 48239538 48242309 2.06 [{'connected_gene': 'ZNF589', 'score': 641.71}, {'connected_gene': 'GC03M048234', 'score': 550.77}, {'connected_gene': 'QRICH1', 'score': 31.48}, {'connected_gene': 'NME6', 'score': 30.07}, {'connected_gene': 'CCDC71', 'score': 22.25}, {'connected_gene': 'ATRIP', 'score': 21.68}, {'connected_gene': 'PTPN23', 'score': 19.6}, {'connected_gene': 'USP19', 'score': 16.82}, {'connected_gene': 'MRPS18AP1', 'score': 15.12}, {'connected_gene': 'TMEM89', 'score': 14.73}, {'connected_gene': 'CDC25A', 'score': 11.3}, {'connected_gene': 'IP6K2', 'score': 11.28}, {'connected_gene': 'QARS', 'score': 10.84}, {'connected_gene': 'PLXNB1', 'score': 10.73}, {'connected_gene': 'TREX1', 'score': 10.5}, {'connected_gene': 'TMA7', 'score': 10.27}, {'connected_gene': 'CCDC51', 'score': 10.27}, {'connected_gene': 'ENSG00000244380', 'score': 10.21}, {'connected_gene': 'FBXW12', 'score': 10.13}, {'connected_gene': 'SPINK8', 'score': 9.71}, {'connected_gene': 'CAMP', 'score': 0.37}]
chr3 GH03I048412 48412467 48416696 0.49 [{'connected_gene': 'TMA7', 'score': 68.28}, {'connected_gene': 'ATRIP', 'score': 16.9}, {'connected_gene': 'ZNF589', 'score': 14.57}, {'connected_gene': 'FBXW12', 'score': 11.43}, {'connected_gene': 'CCDC51', 'score': 11.23}, {'connected_gene': 'ENSG00000244380', 'score': 11.04}, {'connected_gene': 'NME6', 'score': 10.59}, {'connected_gene': 'SPINK8', 'score': 10.25}, {'connected_gene': 'CAMP', 'score': 10.12}, {'connected_gene': 'CDC25A', 'score': 9.96}, {'connected_gene': 'LOC105377077', 'score': 0.37}, {'connected_gene': 'PLXNB1', 'score': 0.37}, {'connected_gene': 'RN7SL321P', 'score': 0.29}]
chr3 GH03I048439 48439156 48442342 2.03 [{'connected_gene': 'TMA7', 'score': 613.05}, {'connected_gene': 'CCDC51', 'score': 550.77}, {'connected_gene': 'ATRIP', 'score': 34.15}, {'connected_gene': 'QRICH1', 'score': 24.95}, {'connected_gene': 'USP19', 'score': 23.53}, {'connected_gene': 'CCDC36', 'score': 22.08}, {'connected_gene': 'ENSG00000225399', 'score': 21.21}, {'connected_gene': 'NME6', 'score': 19.96}, {'connected_gene': 'SHISA5', 'score': 16.04}, {'connected_gene': 'PRKAR2A', 'score': 12.97}, {'connected_gene': 'DHX30', 'score': 11.19}, {'connected_gene': 'IMPDH2', 'score': 10.4}, {'connected_gene': 'ENSG00000235236', 'score': 10.3}, {'connected_gene': 'CDC25A', 'score': 10.22}, {'connected_gene': 'ARIH2', 'score': 10.01}, {'connected_gene': 'TMEM89', 'score': 10.0}, {'connected_gene': 'ZNF589', 'score': 3.96}, {'connected_gene': 'ENSG00000244380', 'score': 0.44}]
chr3 GH03I048397 48397557 48400161 0.56 [{'connected_gene': 'TMA7', 'score': 67.97}, {'connected_gene': 'SHISA5', 'score': 16.13}, {'connected_gene': 'PLXNB1', 'score': 12.21}, {'connected_gene': 'FBXW12', 'score': 11.67}, {'connected_gene': 'CCDC51', 'score': 11.18}, {'connected_gene': 'ATRIP', 'score': 11.16}, {'connected_gene': 'NME6', 'score': 11.08}, {'connected_gene': 'ENSG00000244380', 'score': 11.01}, {'connected_gene': 'SPINK8', 'score': 10.53}, {'connected_gene': 'CDC25A', 'score': 10.31}, {'connected_gene': 'RN7SL321P', 'score': 0.37}, {'connected_gene': 'LOC105377077', 'score': 0.29}]
chr3 GH03I048408 48408066 48409247 0.31 [{'connected_gene': 'TMA7', 'score': 71.66}, {'connected_gene': 'FBXW12', 'score': 11.44}, {'connected_gene': 'CCDC51', 'score': 10.98}, {'connected_gene': 'ATRIP', 'score': 10.97}, {'connected_gene': 'ENSG00000244380', 'score': 10.79}, {'connected_gene': 'NME6', 'score': 10.5}, {'connected_gene': 'ZNF589', 'score': 10.44}, {'connected_gene': 'SPINK8', 'score': 9.98}, {'connected_gene': 'CDC25A', 'score': 9.96}, {'connected_gene': 'SHISA5', 'score': 5.24}, {'connected_gene': 'LOC105377077', 'score': 0.34}, {'connected_gene': 'PLXNB1', 'score': 0.34}, {'connected_gene': 'RN7SL321P', 'score': 0.31}]
chr3 GH03I048535 48535628 48535777 0.4 [{'connected_gene': 'SHISA5', 'score': 12.45}, {'connected_gene': 'UCN2', 'score': 11.5}, {'connected_gene': 'PFKFB4', 'score': 11.5}, {'connected_gene': 'COL7A1', 'score': 11.41}, {'connected_gene': 'ATRIP', 'score': 11.2}, {'connected_gene': 'ENSG00000244380', 'score': 11.2}, {'connected_gene': 'PLXNB1', 'score': 10.92}, {'connected_gene': 'CCDC51', 'score': 10.69}, {'connected_gene': 'TMA7', 'score': 10.69}, {'connected_gene': 'FBXW12', 'score': 10.06}, {'connected_gene': 'NME6', 'score': 9.86}, {'connected_gene': 'SPINK8', 'score': 9.35}, {'connected_gene': 'MIR6823', 'score': 0.39}, {'connected_gene': 'GC03P048513', 'score': 0.34}]
chr3 GH03I048401 48401618 48403322 1.03 [{'connected_gene': 'SHISA5', 'score': 16.14}, {'connected_gene': 'PLXNB1', 'score': 12.23}, {'connected_gene': 'FBXW12', 'score': 11.65}, {'connected_gene': 'CCDC51', 'score': 11.19}, {'connected_gene': 'TMA7', 'score': 11.19}, {'connected_gene': 'ATRIP', 'score': 11.18}, {'connected_gene': 'NME6', 'score': 11.07}, {'connected_gene': 'ENSG00000244380', 'score': 10.53}, {'connected_gene': 'SPINK8', 'score': 10.49}, {'connected_gene': 'RN7SL321P', 'score': 0.34}, {'connected_gene': 'LOC105377077', 'score': 0.31}]
chr3 GH03I048523 48523733 48526232 0.31 [{'connected_gene': 'SHISA5', 'score': 12.54}, {'connected_gene': 'COL7A1', 'score': 11.33}, {'connected_gene': 'ATRIP', 'score': 10.78}, {'connected_gene': 'TMA7', 'score': 10.78}, {'connected_gene': 'CCDC51', 'score': 10.78}, {'connected_gene': 'UCN2', 'score': 10.76}, {'connected_gene': 'PFKFB4', 'score': 10.76}, {'connected_gene': 'ENSG00000244380', 'score': 10.62}, {'connected_gene': 'PLXNB1', 'score': 10.49}, {'connected_gene': 'FBXW12', 'score': 10.26}, {'connected_gene': 'NME6', 'score': 9.79}, {'connected_gene': 'CDC25A', 'score': 9.54}, {'connected_gene': 'RNU7-128P', 'score': 9.54}, {'connected_gene': 'NDUFB1P1', 'score': 9.54}, {'connected_gene': 'SPINK8', 'score': 9.51}, {'connected_gene': 'AMT', 'score': 5.9}, {'connected_gene': 'GC03P048513', 'score': 0.39}, {'connected_gene': 'MIR6823', 'score': 0.31}]
chr3 GH03I048464 48464370 48475807 2.29 [{'connected_gene': 'SHISA5', 'score': 562.46}, {'connected_gene': 'TREX1', 'score': 556.28}, {'connected_gene': 'TMA7', 'score': 67.9}, {'connected_gene': 'ATRIP', 'score': 38.5}, {'connected_gene': 'NME6', 'score': 29.44}, {'connected_gene': 'QRICH1', 'score': 20.52}, {'connected_gene': 'USP19', 'score': 16.82}, {'connected_gene': 'MRPS18AP1', 'score': 14.83}, {'connected_gene': 'TMEM89', 'score': 14.78}, {'connected_gene': 'RHOA-IT1', 'score': 13.56}, {'connected_gene': 'ZNF589', 'score': 12.61}, {'connected_gene': 'CCDC71', 'score': 12.26}, {'connected_gene': 'ENSG00000244380', 'score': 11.68}, {'connected_gene': 'CCDC51', 'score': 11.56}, {'connected_gene': 'PLXNB1', 'score': 11.55}, {'connected_gene': 'ENSG00000223343', 'score': 11.42}, {'connected_gene': 'QARS', 'score': 10.85}, {'connected_gene': 'COL7A1', 'score': 10.67}, {'connected_gene': 'UCN2', 'score': 10.62}, {'connected_gene': 'PFKFB4', 'score': 10.62}, {'connected_gene': 'FBXW12', 'score': 10.55}, {'connected_gene': 'CDC25A', 'score': 9.93}, {'connected_gene': 'SPINK8', 'score': 9.4}, {'connected_gene': 'AMT', 'score': 5.58}, {'connected_gene': 'GC03M048464', 'score': 0.77}, {'connected_gene': 'ENSG00000282827', 'score': 0.34}, {'connected_gene': 'PIR48300', 'score': 0.29}]
chr3 GH03I048085 48085261 48090540 2.61 [{'connected_gene': 'MAP4', 'score': 550.77}, {'connected_gene': 'ATRIP', 'score': 67.27}, {'connected_gene': 'DHX30', 'score': 53.05}, {'connected_gene': 'ZNF589', 'score': 35.25}, {'connected_gene': 'ENSG00000235236', 'score': 30.27}, {'connected_gene': 'SETD2', 'score': 27.79}, {'connected_gene': 'PTPN23', 'score': 20.42}, {'connected_gene': 'TMEM89', 'score': 19.29}, {'connected_gene': 'KLHL18', 'score': 17.09}, {'connected_gene': 'ENSG00000260236', 'score': 13.92}, {'connected_gene': 'BOLA2P2', 'score': 13.1}, {'connected_gene': 'PRKAR2A', 'score': 12.53}, {'connected_gene': 'SCAP', 'score': 12.34}, {'connected_gene': 'ELP6', 'score': 12.28}, {'connected_gene': 'NME6', 'score': 11.86}, {'connected_gene': 'MRPS18AP1', 'score': 11.69}, {'connected_gene': 'ENSG00000223343', 'score': 11.4}, {'connected_gene': 'P4HTM', 'score': 10.42}, {'connected_gene': 'DALRD3', 'score': 9.76}, {'connected_gene': 'ENSG00000270285', 'score': 0.25}]
chr3 GH03I048012 48012601 48017644 1.62 [{'connected_gene': 'MAP4', 'score': 550.19}, {'connected_gene': 'ZNF589', 'score': 17.23}, {'connected_gene': 'RNU7-128P', 'score': 10.79}, {'connected_gene': 'NDUFB1P1', 'score': 10.79}, {'connected_gene': 'CDC25A', 'score': 10.79}, {'connected_gene': 'IP6K2', 'score': 6.76}, {'connected_gene': 'NME6', 'score': 3.7}, {'connected_gene': 'ENSG00000270285', 'score': 0.34}, {'connected_gene': 'VPS26BP1', 'score': 0.23}]
chr3 GH03I049027 49027238 49030623 2.08 [{'connected_gene': 'IMPDH2', 'score': 550.77}, {'connected_gene': 'ENSG00000272434', 'score': 550.77}, {'connected_gene': 'WDR6', 'score': 51.67}, {'connected_gene': 'QRICH1', 'score': 20.7}, {'connected_gene': 'NME6', 'score': 19.38}, {'connected_gene': 'USP19', 'score': 16.95}, {'connected_gene': 'MRPS18AP1', 'score': 14.78}, {'connected_gene': 'TMEM89', 'score': 14.72}, {'connected_gene': 'RBM6', 'score': 14.47}, {'connected_gene': 'RHOA-IT1', 'score': 13.58}, {'connected_gene': 'ZNF589', 'score': 12.56}, {'connected_gene': 'CCDC71', 'score': 12.35}, {'connected_gene': 'ATRIP', 'score': 11.44}, {'connected_gene': 'QARS', 'score': 11.0}, {'connected_gene': 'PIR54048', 'score': 0.77}, {'connected_gene': 'GC03P049088', 'score': 0.77}]
chr3 GH03I048410 48410551 48412031 0.2 [{'connected_gene': 'FBXW12', 'score': 11.44}, {'connected_gene': 'CCDC51', 'score': 11.0}, {'connected_gene': 'TMA7', 'score': 11.0}, {'connected_gene': 'ATRIP', 'score': 10.97}, {'connected_gene': 'ENSG00000244380', 'score': 10.59}, {'connected_gene': 'NME6', 'score': 10.5}, {'connected_gene': 'ZNF589', 'score': 10.43}, {'connected_gene': 'CDC25A', 'score': 9.96}, {'connected_gene': 'SPINK8', 'score': 9.7}, {'connected_gene': 'SHISA5', 'score': 5.24}, {'connected_gene': 'LOC105377077', 'score': 0.37}, {'connected_gene': 'PLXNB1', 'score': 0.37}, {'connected_gene': 'RN7SL321P', 'score': 0.29}]
chr3 GH03I048347 48347571 48347720 0.46 [{'connected_gene': 'FBXW12', 'score': 12.26}, {'connected_gene': 'MIR2115', 'score': 11.41}, {'connected_gene': 'NME6', 'score': 11.02}, {'connected_gene': 'ATRIP', 'score': 9.93}, {'connected_gene': 'CCDC51', 'score': 9.42}, {'connected_gene': 'TMA7', 'score': 9.42}, {'connected_gene': 'SPINK8', 'score': 0.37}]
chr3 GH03I048221 48221842 48224200 1.48 [{'connected_gene': 'CAMP', 'score': 550.77}, {'connected_gene': 'CDC25A', 'score': 11.17}, {'connected_gene': 'RNU7-128P', 'score': 11.03}, {'connected_gene': 'NDUFB1P1', 'score': 11.03}, {'connected_gene': 'NME6', 'score': 10.22}, {'connected_gene': 'SPINK8', 'score': 9.9}, {'connected_gene': 'ZNF589', 'score': 4.33}, {'connected_gene': 'PIR41492', 'score': 0.77}]
chr3 GH03I048247 48247002 48249081 0.72 [{'connected_gene': 'CAMP', 'score': 11.19}, {'connected_gene': 'NME6', 'score': 11.06}, {'connected_gene': 'CDC25A', 'score': 10.71}, {'connected_gene': 'FBXW12', 'score': 10.42}, {'connected_gene': 'CCDC51', 'score': 10.39}, {'connected_gene': 'TMA7', 'score': 10.39}, {'connected_gene': 'ATRIP', 'score': 10.39}, {'connected_gene': 'SPINK8', 'score': 10.22}, {'connected_gene': 'RNU7-128P', 'score': 10.21}, {'connected_gene': 'NDUFB1P1', 'score': 10.21}, {'connected_gene': 'SHISA5', 'score': 10.04}, {'connected_gene': 'ENSG00000244380', 'score': 9.85}, {'connected_gene': 'ZNF589', 'score': 0.44}, {'connected_gene': 'MRPS18AP1', 'score': 0.44}]
chr3 GH03I047379 47379060 47382317 2.12 [{'connected_gene': 'PTPN23', 'score': 581.27}, {'connected_gene': 'ENSG00000260236', 'score': 550.77}, {'connected_gene': 'NME6', 'score': 45.06}, {'connected_gene': 'SETD2', 'score': 40.73}, {'connected_gene': 'MRPS18AP1', 'score': 35.85}, {'connected_gene': 'ZNF589', 'score': 33.82}, {'connected_gene': 'CCDC12', 'score': 29.51}, {'connected_gene': 'BOLA2P2', 'score': 22.84}, {'connected_gene': 'NBEAL2', 'score': 12.63}, {'connected_gene': 'SCAP', 'score': 12.46}, {'connected_gene': 'SMARCC1', 'score': 11.0}, {'connected_gene': 'DHX30', 'score': 9.97}, {'connected_gene': 'KLHL18', 'score': 9.19}, {'connected_gene': 'ENSG00000280173', 'score': 0.29}]
chr3 GH03I049005 49005824 49008933 2.27 [{'connected_gene': 'WDR6', 'score': 612.92}, {'connected_gene': 'ATRIP', 'score': 43.97}, {'connected_gene': 'QRICH1', 'score': 33.88}, {'connected_gene': 'USP19', 'score': 23.64}, {'connected_gene': 'CCDC36', 'score': 22.13}, {'connected_gene': 'ENSG00000225399', 'score': 21.26}, {'connected_gene': 'PRKAR2A', 'score': 13.03}, {'connected_gene': 'IMPDH2', 'score': 10.71}, {'connected_gene': 'ENSG00000235236', 'score': 10.61}, {'connected_gene': 'ARIH2', 'score': 10.13}, {'connected_gene': 'TMEM89', 'score': 9.97}, {'connected_gene': 'NME6', 'score': 9.88}, {'connected_gene': 'ZNF589', 'score': 9.88}, {'connected_gene': 'PIR62097', 'score': 0.44}, {'connected_gene': 'GC03P049079', 'score': 0.44}, {'connected_gene': 'P4HTM', 'score': 0.37}]
chr3 GH03I048742 48741799 48742937 1.55 [{'connected_gene': 'WDR6', 'score': 51.2}, {'connected_gene': 'QRICH1', 'score': 33.19}, {'connected_gene': 'ATRIP', 'score': 28.64}, {'connected_gene': 'AMT', 'score': 28.61}, {'connected_gene': 'ZNF589', 'score': 20.42}, {'connected_gene': 'CCDC71', 'score': 18.56}, {'connected_gene': 'PRKAR2A', 'score': 12.64}, {'connected_gene': 'USP19', 'score': 12.4}, {'connected_gene': 'QARS', 'score': 11.83}, {'connected_gene': 'NME6', 'score': 11.83}, {'connected_gene': 'MRPS18AP1', 'score': 11.64}, {'connected_gene': 'ENSG00000235236', 'score': 11.52}, {'connected_gene': 'TMEM89', 'score': 11.16}, {'connected_gene': 'DHX30', 'score': 9.94}, {'connected_gene': 'TREX1', 'score': 7.38}, {'connected_gene': 'DALRD3', 'score': 3.07}, {'connected_gene': 'ARIH2', 'score': 2.75}, {'connected_gene': 'IP6K2', 'score': 0.77}, {'connected_gene': 'PIR40170', 'score': 0.44}]
chr3 GH03I049265 49265022 49267639 0.72 [{'connected_gene': 'WDR6', 'score': 39.83}, {'connected_gene': 'QRICH1', 'score': 30.92}, {'connected_gene': 'AMT', 'score': 20.71}, {'connected_gene': 'RBM5', 'score': 16.63}, {'connected_gene': 'RBM6', 'score': 16.12}, {'connected_gene': 'SEMA3F-AS1', 'score': 14.61}, {'connected_gene': 'NME6', 'score': 14.28}, {'connected_gene': 'IP6K2', 'score': 14.21}, {'connected_gene': 'USP19', 'score': 14.08}, {'connected_gene': 'ATRIP', 'score': 13.03}, {'connected_gene': 'NICN1', 'score': 12.02}, {'connected_gene': 'ENSG00000235236', 'score': 11.66}, {'connected_gene': 'CCDC36', 'score': 11.53}, {'connected_gene': 'C3orf84', 'score': 11.52}, {'connected_gene': 'KLHDC8B', 'score': 11.17}, {'connected_gene': 'CCDC71', 'score': 11.17}, {'connected_gene': 'ENSG00000223343', 'score': 11.11}, {'connected_gene': 'RHOA-IT1', 'score': 10.87}, {'connected_gene': 'FCF1P2', 'score': 10.76}, {'connected_gene': 'LAMB2', 'score': 10.7}, {'connected_gene': 'RHOA', 'score': 10.48}, {'connected_gene': 'TCTA', 'score': 10.48}, {'connected_gene': 'P4HTM', 'score': 10.45}, {'connected_gene': 'QARS', 'score': 10.18}, {'connected_gene': 'BSN', 'score': 9.37}, {'connected_gene': 'BSN-AS2', 'score': 8.89}, {'connected_gene': 'ENSG00000199546', 'score': 0.77}, {'connected_gene': 'ENSG00000225399', 'score': 0.44}]
chr3 GH03I048424 48424574 48436680 2.48 [{'connected_gene': 'LOC105377077', 'score': 550.77}, {'connected_gene': 'PLXNB1', 'score': 550.77}, {'connected_gene': 'TMA7', 'score': 62.72}, {'connected_gene': 'SHISA5', 'score': 17.31}, {'connected_gene': 'FBXW12', 'score': 10.93}, {'connected_gene': 'NME6', 'score': 10.39}, {'connected_gene': 'SPINK8', 'score': 10.32}, {'connected_gene': 'CDC25A', 'score': 10.22}, {'connected_gene': 'RNU7-128P', 'score': 10.22}, {'connected_gene': 'NDUFB1P1', 'score': 10.22}, {'connected_gene': 'TREX1', 'score': 7.34}, {'connected_gene': 'LAMB2', 'score': 5.65}, {'connected_gene': 'CCDC51', 'score': 0.39}]
chr3 GH03I048661 48661997 48665134 2.09 [{'connected_gene': 'CELSR3-AS1', 'score': 550.77}, {'connected_gene': 'CELSR3', 'score': 550.77}, {'connected_gene': 'WDR6', 'score': 28.19}, {'connected_gene': 'QRICH1', 'score': 24.52}, {'connected_gene': 'ATRIP', 'score': 18.4}, {'connected_gene': 'USP19', 'score': 12.4}, {'connected_gene': 'ZNF589', 'score': 12.29}, {'connected_gene': 'NME6', 'score': 11.84}, {'connected_gene': 'MRPS18AP1', 'score': 11.64}, {'connected_gene': 'ENSG00000235236', 'score': 11.5}, {'connected_gene': 'TMEM89', 'score': 11.3}, {'connected_gene': 'CCDC71', 'score': 10.44}, {'connected_gene': 'DHX30', 'score': 9.94}]
chr3 GH03I048549 48549503 48550478 0.58 [{'connected_gene': 'MIR6823', 'score': 550.77}, {'connected_gene': 'ATRIP', 'score': 20.09}, {'connected_gene': 'COL7A1', 'score': 11.72}, {'connected_gene': 'ENSG00000244380', 'score': 11.24}, {'connected_gene': 'CCDC51', 'score': 11.13}, {'connected_gene': 'TMA7', 'score': 11.13}, {'connected_gene': 'FBXW12', 'score': 10.37}, {'connected_gene': 'NME6', 'score': 10.11}, {'connected_gene': 'CDC25A', 'score': 9.62}, {'connected_gene': 'RNU7-128P', 'score': 9.16}, {'connected_gene': 'NDUFB1P1', 'score': 9.16}, {'connected_gene': 'PFKFB4', 'score': 0.39}, {'connected_gene': 'GC03P048513', 'score': 0.28}]
chr3 GH03I048548 48548828 48549017 0.87 [{'connected_gene': 'MIR6823', 'score': 550.77}, {'connected_gene': 'COL7A1', 'score': 11.72}, {'connected_gene': 'ATRIP', 'score': 11.24}, {'connected_gene': 'ENSG00000244380', 'score': 11.24}, {'connected_gene': 'CCDC51', 'score': 11.13}, {'connected_gene': 'TMA7', 'score': 11.13}, {'connected_gene': 'FBXW12', 'score': 10.37}, {'connected_gene': 'NME6', 'score': 10.11}, {'connected_gene': 'CDC25A', 'score': 9.62}, {'connected_gene': 'RNU7-128P', 'score': 9.16}, {'connected_gene': 'NDUFB1P1', 'score': 9.16}, {'connected_gene': 'PFKFB4', 'score': 0.39}, {'connected_gene': 'GC03P048513', 'score': 0.28}]
chr3 GH03I048275 48275751 48275900 0.57 [{'connected_gene': 'NME6', 'score': 11.92}, {'connected_gene': 'ATRIP', 'score': 10.65}, {'connected_gene': 'ENSG00000244380', 'score': 10.65}, {'connected_gene': 'FBXW12', 'score': 10.63}, {'connected_gene': 'ZNF589', 'score': 10.62}, {'connected_gene': 'PLXNB1', 'score': 10.45}, {'connected_gene': 'UCN2', 'score': 10.27}, {'connected_gene': 'PFKFB4', 'score': 10.27}, {'connected_gene': 'COL7A1', 'score': 10.26}, {'connected_gene': 'SPINK8', 'score': 10.2}, {'connected_gene': 'CDC25A', 'score': 9.96}, {'connected_gene': 'PIR48293', 'score': 0.44}, {'connected_gene': 'ENSG00000199476', 'score': 0.39}]
chr3 GH03I048277 48277111 48277345 0.31 [{'connected_gene': 'NME6', 'score': 11.92}, {'connected_gene': 'ATRIP', 'score': 10.66}, {'connected_gene': 'ENSG00000244380', 'score': 10.66}, {'connected_gene': 'FBXW12', 'score': 10.64}, {'connected_gene': 'ZNF589', 'score': 10.61}, {'connected_gene': 'PLXNB1', 'score': 10.45}, {'connected_gene': 'UCN2', 'score': 10.27}, {'connected_gene': 'PFKFB4', 'score': 10.27}, {'connected_gene': 'COL7A1', 'score': 10.26}, {'connected_gene': 'SPINK8', 'score': 10.2}, {'connected_gene': 'CDC25A', 'score': 9.96}, {'connected_gene': 'PIR48293', 'score': 0.44}, {'connected_gene': 'ENSG00000199476', 'score': 0.39}]
chr3 GH03I048273 48273711 48273880 0.63 [{'connected_gene': 'NME6', 'score': 11.96}, {'connected_gene': 'ZNF589', 'score': 11.54}, {'connected_gene': 'PLXNB1', 'score': 11.26}, {'connected_gene': 'CCDC51', 'score': 10.65}, {'connected_gene': 'TMA7', 'score': 10.65}, {'connected_gene': 'ATRIP', 'score': 10.64}, {'connected_gene': 'FBXW12', 'score': 10.52}, {'connected_gene': 'SPINK8', 'score': 10.51}, {'connected_gene': 'CAMP', 'score': 10.48}, {'connected_gene': 'CDC25A', 'score': 10.42}, {'connected_gene': 'ENSG00000244380', 'score': 10.26}, {'connected_gene': 'PIR48293', 'score': 0.77}, {'connected_gene': 'ENSG00000199476', 'score': 0.39}]
chr3 GH03I048299 48299727 48303167 2.08 [{'connected_gene': 'NME6', 'score': 550.77}, {'connected_gene': 'ZNF589', 'score': 62.76}, {'connected_gene': 'FCF1P2', 'score': 22.35}, {'connected_gene': 'BOLA2P2', 'score': 13.24}, {'connected_gene': 'ENSG00000235236', 'score': 11.93}, {'connected_gene': 'ENSG00000260236', 'score': 10.31}, {'connected_gene': 'IP6K2', 'score': 10.29}, {'connected_gene': 'PTPN23', 'score': 10.13}]
chr3 GH03I047441 47441116 47445080 1.51 [{'connected_gene': 'NME6', 'score': 18.89}, {'connected_gene': 'SETD2', 'score': 16.66}, {'connected_gene': 'PTPN23', 'score': 16.25}, {'connected_gene': 'NBEAL2', 'score': 12.71}, {'connected_gene': 'SCAP', 'score': 12.45}, {'connected_gene': 'ZNF589', 'score': 12.3}, {'connected_gene': 'MRPS18AP1', 'score': 11.93}, {'connected_gene': 'CCDC12', 'score': 11.34}, {'connected_gene': 'ELP6', 'score': 11.08}, {'connected_gene': 'BOLA2P2', 'score': 10.65}, {'connected_gene': 'FCF1P2', 'score': 9.95}, {'connected_gene': 'KLHL18', 'score': 9.02}, {'connected_gene': 'PTH1R', 'score': 6.48}, {'connected_gene': 'PIR43961', 'score': 0.34}, {'connected_gene': 'GC03M047419', 'score': 0.34}, {'connected_gene': 'ENSG00000276925', 'score': 0.31}]
chr3 GH03I048267 48267070 48270293 0.82 [{'connected_gene': 'PIR48293', 'score': 550.77}, {'connected_gene': 'ZNF589', 'score': 75.35}, {'connected_gene': 'WDR6', 'score': 13.87}, {'connected_gene': 'FBXW12', 'score': 11.82}, {'connected_gene': 'PLXNB1', 'score': 11.72}, {'connected_gene': 'CDC25A', 'score': 11.12}, {'connected_gene': 'NME6', 'score': 11.08}, {'connected_gene': 'SPINK8', 'score': 11.07}, {'connected_gene': 'CAMP', 'score': 10.97}, {'connected_gene': 'ATRIP', 'score': 10.55}, {'connected_gene': 'ENSG00000244380', 'score': 10.55}, {'connected_gene': 'TMA7', 'score': 10.21}, {'connected_gene': 'CCDC51', 'score': 10.21}, {'connected_gene': 'RNU7-128P', 'score': 9.94}, {'connected_gene': 'NDUFB1P1', 'score': 9.94}, {'connected_gene': 'MRPS18AP1', 'score': 0.39}]

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