PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000360488	[[25912981, 25913679], [25914807, 25914898], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926107], [25930504, 25930839]]	[[25913522, 25913679], [25914807, 25914898], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926024]]
ENST00000377850	[[25912981, 25913679], [25914807, 25914898], [25915726, 25915874], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926107], [25930504, 25930946]]	[[25913544, 25913679], [25914807, 25914898], [25915726, 25915874], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926024]]
ENST00000265425	[[25913544, 25913679], [25914772, 25914898], [25915726, 25915874], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926045]]	[[25914789, 25914898], [25915726, 25915874], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926024]]
NM_001286123	[[25912981, 25913679], [25914807, 25914898], [25915726, 25915874], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926107]]	[[25913544, 25913679], [25914807, 25914898], [25915726, 25915874], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926024]]
NM_001286125	[[25912981, 25913679], [25914772, 25914898], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926107]]	[[25913671, 25913679], [25914772, 25914898], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926024]]
NM_005835	[[25912981, 25913679], [25914807, 25914898], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926107], [25930504, 25930954]]	[[25913522, 25913679], [25914807, 25914898], [25915963, 25916096], [25916912, 25917074], [25917196, 25917315], [25918714, 25918801], [25921233, 25921321], [25921406, 25921640], [25923922, 25924134], [25925996, 25926024]]

Promoter

Chrom	Start	End	Description
chr6	25930819	25930838	CAGE_peak_3_at_SLC17A2_5end
chr6	25930840	25930859	CAGE_peak_2_at_SLC17A2_5end
chr6	25930904	25930926	CAGE_peak_1_at_SLC17A2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I025958	25958667	25965176	2.24	[{'connected_gene': 'TRIM38', 'score': 561.52}, {'connected_gene': 'ENSG00000272462', 'score': 29.55}, {'connected_gene': 'ABT1', 'score': 15.98}, {'connected_gene': 'NUP50P2', 'score': 12.25}, {'connected_gene': 'HMGN4', 'score': 10.87}, {'connected_gene': 'BTN2A3P', 'score': 10.28}, {'connected_gene': 'BTN3A2', 'score': 9.99}, {'connected_gene': 'BTN2A1', 'score': 9.8}, {'connected_gene': 'SLC17A4', 'score': 9.54}, {'connected_gene': 'SLC17A2', 'score': 0.29}, {'connected_gene': 'GC06P025915', 'score': 0.25}]
chr6	GH06I025930	25930681	25930740	1.11	[{'connected_gene': 'SLC17A2', 'score': 550.77}, {'connected_gene': 'GC06P025925', 'score': 0.77}, {'connected_gene': 'GC06P025915', 'score': 0.37}]
chr6	GH06I025865	25865776	25866659	0.77	[{'connected_gene': 'ENSG00000272462', 'score': 37.13}, {'connected_gene': 'SLC17A1', 'score': 16.52}, {'connected_gene': 'BTN3A2', 'score': 15.76}, {'connected_gene': 'SLC17A2', 'score': 11.66}, {'connected_gene': 'SLC17A4', 'score': 10.43}, {'connected_gene': 'SLC17A3', 'score': 0.37}, {'connected_gene': 'PIR39663', 'score': 0.31}]
chr6	GH06I025952	25952004	25953845	0.66	[{'connected_gene': 'ENSG00000272462', 'score': 26.87}, {'connected_gene': 'TRIM38', 'score': 11.19}, {'connected_gene': 'SLC17A2', 'score': 0.34}, {'connected_gene': 'GC06P025915', 'score': 0.28}]