PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr1	220263096	220263192	CAGE_peak_1_at_BPNT1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I143126	143126000	143126401	0.66	[{'connected_gene': 'KEL', 'score': 16.69}, {'connected_gene': 'LLCFC1', 'score': 10.1}, {'connected_gene': 'TRPV5', 'score': 10.1}, {'connected_gene': 'TMEM139', 'score': 4.9}, {'connected_gene': 'PIP', 'score': 0.44}, {'connected_gene': 'OR6W1P', 'score': 0.21}]
chr7	GH07I143098	143098761	143099162	0.35	[{'connected_gene': 'OR6V1', 'score': 12.92}, {'connected_gene': 'OR9P1P', 'score': 11.64}, {'connected_gene': 'TAS2R39', 'score': 11.07}, {'connected_gene': 'PIP', 'score': 0.29}, {'connected_gene': 'OR6W1P', 'score': 0.28}]
chr7	GH07I143120	143120202	143121486	0.43	[{'connected_gene': 'OR6V1', 'score': 11.28}, {'connected_gene': 'TAS2R39', 'score': 11.27}, {'connected_gene': 'OR9P1P', 'score': 11.27}, {'connected_gene': 'KEL', 'score': 10.2}, {'connected_gene': 'LLCFC1', 'score': 10.18}, {'connected_gene': 'TRPV5', 'score': 10.18}, {'connected_gene': 'TMEM139', 'score': 4.9}, {'connected_gene': 'TCAF2', 'score': 4.68}, {'connected_gene': 'GSTK1', 'score': 4.24}, {'connected_gene': 'PIP', 'score': 0.39}, {'connected_gene': 'OR6W1P', 'score': 0.22}]
chr1	GH01I220270	220270912	220273472	2.08	[{'connected_gene': 'RAB3GAP2', 'score': 567.35}, {'connected_gene': 'RPS15AP12', 'score': 15.79}, {'connected_gene': 'SNX2P1', 'score': 10.9}, {'connected_gene': 'BPNT1', 'score': 4.44}, {'connected_gene': 'AURKAPS1', 'score': 0.77}]
chr7	GH07I143132	143132028	143132087	0.61	[{'connected_gene': 'PIP', 'score': 550.77}, {'connected_gene': 'OR6W1P', 'score': 0.2}]
chr1	GH01I220088	220088800	220090760	2.06	[{'connected_gene': 'BPNT1', 'score': 550.77}, {'connected_gene': 'RPS15AP12', 'score': 13.6}, {'connected_gene': 'ZC3H11B', 'score': 12.59}, {'connected_gene': 'RIMKLBP2', 'score': 10.4}, {'connected_gene': 'EPRS', 'score': 5.99}, {'connected_gene': 'PIR35692', 'score': 0.29}]
chr1	GH01I220084	220084195	220085566	0.49	[{'connected_gene': 'BPNT1', 'score': 0.44}, {'connected_gene': 'PIR35692', 'score': 0.31}]
chr1	GH01I220086	220086259	220086428	0.72	[{'connected_gene': 'BPNT1', 'score': 0.77}, {'connected_gene': 'PIR35692', 'score': 0.31}]
chr1	GH01I220085	220085597	220085683	0.2	[{'connected_gene': 'BPNT1', 'score': 0.77}, {'connected_gene': 'PIR35692', 'score': 0.31}]
chr1	GH01I220219	220219141	220222907	1.06	[{'connected_gene': 'ENSG00000270708', 'score': 550.77}, {'connected_gene': 'RAB3GAP2', 'score': 13.46}, {'connected_gene': 'BPNT1', 'score': 1.82}, {'connected_gene': 'EPRS', 'score': 1.28}, {'connected_gene': 'GC01P220248', 'score': 0.31}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000322067	[[220230823, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220253068, 220253196], [220263027, 220263191]]	[[220232185, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220253068, 220253188]]
ENST00000469520	[[220230825, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220253068, 220253196], [220263027, 220263293], [220263628, 220263804]]	[[220232185, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220253068, 220253188]]
ENST00000354807	[[220231072, 220231259], [220232287, 220232334], [220233027, 220233133], [220236098, 220236296], [220239414, 220239459], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220253068, 220253196], [220263027, 220263114]]	[[220231253, 220231259], [220232287, 220232334], [220233027, 220233133], [220236098, 220236296], [220239414, 220239459], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220253068, 220253188]]
ENST00000544404	[[220231791, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220262985, 220263175]]	[[220232185, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247368]]
ENST00000414869	[[220231940, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220247308, 220247413], [220253068, 220253196], [220263027, 220263139]]	[[220232185, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220247308, 220247413], [220253068, 220253188]]
ENST00000482136	[[220236140, 220236296], [220240371, 220240467], [220240643, 220240735], [220242725, 220242774], [220247308, 220247413], [220263027, 220263075]]	None
ENST00000463953	[[220236152, 220236296], [220240643, 220240735], [220242725, 220242774], [220247308, 220247413], [220253068, 220253196], [220262985, 220263111]]	[[220236152, 220236296], [220240643, 220240735], [220242725, 220242774], [220247308, 220247413], [220253068, 220253188]]
ENST00000498791	[[220236253, 220236296], [220240643, 220240735], [220242725, 220242774], [220247308, 220247413], [220253068, 220253196], [220263027, 220263169]]	[[220236253, 220236296], [220240643, 220240735], [220242725, 220242774], [220247308, 220247413], [220253068, 220253188]]
ENST00000480959	[[220236257, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220262985, 220263175]]	[[220236257, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247368]]
ENST00000548668	[[220240356, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247409]]	None
ENST00000498237	[[220242723, 220242774], [220246191, 220246299], [220247308, 220247413], [220253068, 220253196], [220262985, 220263154]]	[[220242723, 220242774], [220246191, 220246299], [220247308, 220247413], [220253068, 220253188]]
NM_001286151	[[220230823, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220262985, 220263195]]	[[220232185, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247368]]
NM_006085	[[220230823, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220253068, 220253196], [220263027, 220263195]]	[[220232185, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220253068, 220253188]]
NM_001286150	[[220230823, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220247308, 220247413], [220253068, 220253196], [220263027, 220263195]]	[[220232185, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220247308, 220247413], [220253068, 220253188]]
NM_001286149	[[220230823, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247413], [220263027, 220263195]]	[[220232185, 220232334], [220233027, 220233133], [220236098, 220236296], [220240643, 220240735], [220242725, 220242774], [220246191, 220246299], [220247308, 220247368]]