Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000372676 [[44098345, 44098500], [44099028, 44099172], [44108581, 44108734], [44110010, 44110172]] [[44098421, 44098500], [44099028, 44099172]]
ENST00000217425 [[44098395, 44098500], [44099028, 44099172], [44108281, 44108388]] [[44098421, 44098500], [44099028, 44099172], [44108281, 44108367]]
ENST00000447118 [[44098395, 44098500], [44099028, 44099172], [44099792, 44099921], [44108581, 44108734], [44110010, 44110171]] [[44098421, 44098500], [44099028, 44099172], [44099792, 44099809]]
ENST00000339946 [[44098395, 44098500], [44108581, 44108734], [44110010, 44110172]] [[44098421, 44098500]]
ENST00000462062 [[44099912, 44100057], [44108581, 44108734], [44110010, 44110172]] None
ENST00000488143 [[44108078, 44108409], [44108581, 44108734], [44110010, 44110172]] None
ENST00000342873 [[44108078, 44108734], [44110010, 44110172]] [[44108511, 44108733]]
NM_006103 [[44098393, 44098500], [44099028, 44099172], [44108581, 44108734], [44110010, 44110172]] [[44098421, 44098500], [44099028, 44099172]]
Promoter
Chrom Start End Description
chr20 44098361 44098373 CAGE_peak_2_at_WFDC2_5end
chr20 44098385 44098401 CAGE_peak_1_at_WFDC2_5end
chr20 44099471 44099486 CAGE_peak_3_at_WFDC2_5end
chr20 44099855 44099881 CAGE_peak_6_at_WFDC2_5end
chr20 44099906 44099912 CAGE_peak_8_at_WFDC2_5end
chr20 44108584 44108596 CAGE_peak_4_at_WFDC2_5end
chr20 44108603 44108617 CAGE_peak_7_at_WFDC2_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr20 GH20I045448 45448381 45448790 0.58 [{'connected_gene': 'WFDC2', 'score': 550.77}, {'connected_gene': 'ENSG00000277022', 'score': 550.77}, {'connected_gene': 'GC20P045440', 'score': 0.44}, {'connected_gene': 'PIGT', 'score': 0.29}]
chr20 GH20I045469 45469288 45471360 1.42 [{'connected_gene': 'WFDC2', 'score': 550.34}, {'connected_gene': 'PIGT', 'score': 5.08}, {'connected_gene': 'ENSG00000237464', 'score': 0.37}]
chr20 GH20I045450 45450461 45450730 0.9 [{'connected_gene': 'WFDC2', 'score': 550.77}, {'connected_gene': 'GC20P045440', 'score': 0.44}, {'connected_gene': 'PIGT', 'score': 0.29}, {'connected_gene': 'ENSG00000237464', 'score': 0.28}]
chr20 GH20I045449 45449410 45450344 0.82 [{'connected_gene': 'WFDC2', 'score': 550.77}, {'connected_gene': 'ENSG00000277022', 'score': 550.77}, {'connected_gene': 'GC20P045440', 'score': 0.44}, {'connected_gene': 'PIGT', 'score': 0.29}, {'connected_gene': 'ENSG00000237464', 'score': 0.28}]
chr20 GH20I045452 45452801 45453200 0.31 [{'connected_gene': 'ENSG00000237464', 'score': 10.99}, {'connected_gene': 'WFDC2', 'score': 0.77}, {'connected_gene': 'GC20P045440', 'score': 0.39}, {'connected_gene': 'PIGT', 'score': 0.28}]

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