PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000264451	[[41992488, 41992777], [42003632, 42003797], [42020127, 42020187], [42022432, 42022532], [42024854, 42024947], [42025318, 42025401], [42037291, 42037350], [42041002, 42041070], [42051393, 42051496], [42062207, 42062263], [42065002, 42065138], [42067326, 42067366], [42068566, 42068638], [42069101, 42069209], [42072542, 42072708], [42077673, 42077803], [42080228, 42080342], [42088098, 42092474]]	[[41992668, 41992777], [42003632, 42003797], [42020127, 42020187], [42022432, 42022532], [42024854, 42024947], [42025318, 42025401], [42037291, 42037350], [42041002, 42041070], [42051393, 42051496], [42062207, 42062263], [42065002, 42065138], [42067326, 42067366], [42068566, 42068638], [42069101, 42069209], [42072542, 42072708], [42077673, 42077803], [42080228, 42080342], [42088098, 42088143]]
ENST00000513699	[[41992518, 41992777], [42003632, 42003797], [42020127, 42020187], [42020405, 42020522], [42022432, 42022532], [42024854, 42024947], [42025318, 42025401], [42037291, 42037350], [42041002, 42041070], [42051393, 42051496], [42062207, 42062263], [42065002, 42065138], [42067326, 42067366], [42068566, 42068638], [42069101, 42069209], [42072542, 42072708], [42077673, 42077803], [42080228, 42080342], [42088098, 42088386]]	[[41992668, 41992777], [42003632, 42003797], [42020127, 42020187], [42020405, 42020431]]
ENST00000509683	[[42065050, 42065138], [42067326, 42067366], [42068566, 42068638], [42069101, 42069209], [42077673, 42077803], [42080228, 42080868]]	None
ENST00000505523	[[42072205, 42072309], [42072542, 42072708], [42077673, 42077803], [42080228, 42080342], [42088098, 42088393]]	None
ENST00000510460	[[41992543, 41992777], [42003632, 42003797], [42020127, 42020187], [42022432, 42022792]]	None
NM_006345	[[41992522, 41992777], [42003632, 42003797], [42020127, 42020187], [42022432, 42022532], [42024854, 42024947], [42025318, 42025401], [42037291, 42037350], [42041002, 42041070], [42051393, 42051496], [42062207, 42062263], [42065002, 42065138], [42067326, 42067366], [42068566, 42068638], [42069101, 42069209], [42072542, 42072708], [42077673, 42077803], [42080228, 42080342], [42088098, 42089551]]	[[41992668, 41992777], [42003632, 42003797], [42020127, 42020187], [42022432, 42022532], [42024854, 42024947], [42025318, 42025401], [42037291, 42037350], [42041002, 42041070], [42051393, 42051496], [42062207, 42062263], [42065002, 42065138], [42067326, 42067366], [42068566, 42068638], [42069101, 42069209], [42072542, 42072708], [42077673, 42077803], [42080228, 42080342], [42088098, 42088143]]

Promoter

Chrom	Start	End	Description
chr4	41992513	41992561	CAGE_peak_1_at_SLC30A9_5end
chr4	41992565	41992580	CAGE_peak_2_at_SLC30A9_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I041256	41256244	41259065	1.92	[{'connected_gene': 'UCHL1', 'score': 561.77}, {'connected_gene': 'UCHL1-AS1', 'score': 550.77}, {'connected_gene': 'SLC30A9', 'score': 10.76}, {'connected_gene': 'GC04P041269', 'score': 0.39}, {'connected_gene': 'PIR50176', 'score': 0.39}]
chr4	GH04I041211	41211604	41217882	2.26	[{'connected_gene': 'APBB2', 'score': 560.33}, {'connected_gene': 'ATP1B1P1', 'score': 16.21}, {'connected_gene': 'UCHL1-AS1', 'score': 11.5}, {'connected_gene': 'UCHL1', 'score': 11.5}, {'connected_gene': 'ENSG00000250906', 'score': 11.46}, {'connected_gene': 'SLC30A9', 'score': 10.55}, {'connected_gene': 'RNU6-1195P', 'score': 0.15}]
chr4	GH04I041346	41346338	41347373	1.04	[{'connected_gene': 'SLC30A9', 'score': 28.73}, {'connected_gene': 'LIMCH1', 'score': 20.8}, {'connected_gene': 'UCHL1', 'score': 11.73}, {'connected_gene': 'ATP1B1P1', 'score': 9.67}, {'connected_gene': 'GC04M041303', 'score': 0.26}, {'connected_gene': 'ENSG00000207481', 'score': 0.26}]
chr4	GH04I041989	41989600	41992557	2.03	[{'connected_gene': 'SLC30A9', 'score': 563.3}, {'connected_gene': 'GC04M041991', 'score': 550.77}, {'connected_gene': 'ENSG00000272862', 'score': 550.77}, {'connected_gene': 'GC04P042010', 'score': 0.37}]