PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000358704	[[244214584, 244214746], [244217089, 244220778]]	[[244214733, 244214746], [244217089, 244218672]]
NM_001278196	[[244212240, 244212295], [244217089, 244220778]]	[[244217103, 244218672]]
NM_205768	[[244214560, 244214746], [244217089, 244220778]]	[[244214733, 244214746], [244217089, 244218672]]
NM_006352	[[244216506, 244220778]]	[[244217103, 244218672]]

Promoter

Chrom	Start	End	Description
chr1	244214577	244214593	CAGE_peak_1_at_ZNF238_5end
chr1	244214611	244214624	CAGE_peak_4_at_ZNF238_5end
chr1	244214655	244214666	CAGE_peak_7_at_ZNF238_5end
chr1	244219038	244219054	CAGE_peak_3_at_ZNF238_5end
chr1	244219392	244219409	CAGE_peak_5_at_ZNF238_5end
chr1	244219775	244219893	CAGE_peak_2_at_ZNF238_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I244059	244059234	244064545	0.54	[{'connected_gene': 'LOC440742', 'score': 0.77}, {'connected_gene': 'ZBTB18', 'score': 0.39}]
chr1	GH01I244046	244046005	244053384	3.01	[{'connected_gene': 'ZBTB18', 'score': 573.21}, {'connected_gene': 'DESI2', 'score': 24.02}, {'connected_gene': 'ENSG00000253326', 'score': 15.36}, {'connected_gene': 'COX20', 'score': 15.18}, {'connected_gene': 'AKT3', 'score': 12.95}, {'connected_gene': 'HNRNPU', 'score': 12.83}, {'connected_gene': 'LINC01347', 'score': 11.61}, {'connected_gene': 'LOC101928068', 'score': 10.02}, {'connected_gene': 'ENSG00000236031', 'score': 9.97}, {'connected_gene': 'ADSS', 'score': 9.75}, {'connected_gene': 'SDCCAG8', 'score': 9.68}, {'connected_gene': 'LOC440742', 'score': 0.39}, {'connected_gene': 'LOC339529', 'score': 0.12}]
chr1	GH01I244057	244057262	244057474	0.71	[{'connected_gene': 'ZBTB18', 'score': 0.44}, {'connected_gene': 'LOC440742', 'score': 0.44}]
chr1	GH01I244056	244056808	244057099	0.83	[{'connected_gene': 'ZBTB18', 'score': 0.44}, {'connected_gene': 'LOC440742', 'score': 0.44}]
chr1	GH01I244055	244055946	244056260	0.71	[{'connected_gene': 'ZBTB18', 'score': 0.44}, {'connected_gene': 'LOC440742', 'score': 0.44}]
chr1	GH01I244053	244053521	244055124	0.71	[{'connected_gene': 'ZBTB18', 'score': 0.44}, {'connected_gene': 'LOC440742', 'score': 0.39}]
chr1	GH01I244037	244037466	244038789	0.2	[{'connected_gene': 'ZBTB18', 'score': 0.39}, {'connected_gene': 'GC01P244011', 'score': 0.31}, {'connected_gene': 'LOC339529', 'score': 0.13}]
chr1	GH01I244186	244186513	244186638	0.22	[{'connected_gene': 'ZBTB18', 'score': 3.75}, {'connected_gene': 'LOC105373261', 'score': 0.2}, {'connected_gene': 'GC01M244263', 'score': 0.18}]
chr1	GH01I244195	244195231	244195368	0.22	[{'connected_gene': 'ZBTB18', 'score': 3.48}, {'connected_gene': 'GC01M244263', 'score': 0.2}, {'connected_gene': 'LOC105373261', 'score': 0.18}]
chr1	GH01I244191	244191615	244191899	0.29	[{'connected_gene': 'ZBTB18', 'score': 5.9}, {'connected_gene': 'LOC105373261', 'score': 0.19}, {'connected_gene': 'GC01M244263', 'score': 0.19}]
chr1	GH01I244253	244253766	244255384	1.08	[{'connected_gene': 'AKT3', 'score': 2.26}, {'connected_gene': 'ZBTB18', 'score': 2.04}, {'connected_gene': 'ADSS', 'score': 1.62}, {'connected_gene': 'GC01M244263', 'score': 0.44}, {'connected_gene': 'LOC105373262', 'score': 0.19}, {'connected_gene': 'LOC105373261', 'score': 0.12}]
chr1	GH01I244012	244012041	244012800	0.31	[{'connected_gene': 'GC01P244011', 'score': 550.77}, {'connected_gene': 'C1orf100', 'score': 4.87}, {'connected_gene': 'ZBTB18', 'score': 0.28}, {'connected_gene': 'LOC339529', 'score': 0.15}]
chr1	GH01I244021	244021827	244023860	0.43	[{'connected_gene': 'GC01P244011', 'score': 0.39}, {'connected_gene': 'ZBTB18', 'score': 0.31}, {'connected_gene': 'LOC339529', 'score': 0.14}]
chr1	GH01I244011	244011344	244011669	0.4	[{'connected_gene': 'GC01P244011', 'score': 550.77}, {'connected_gene': 'ZBTB18', 'score': 0.28}, {'connected_gene': 'LOC339529', 'score': 0.16}]