PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000264834	[[12995236, 12995874], [12996130, 12996956], [12997867, 12997995]]	[[12995698, 12995874], [12996130, 12996956], [12997867, 12997954]]
NM_006563	[[12995235, 12995874], [12996130, 12996956], [12997867, 12998017]]	[[12995698, 12995874], [12996130, 12996956], [12997867, 12997954]]

Promoter

Chrom	Start	End	Description
chr19	12998003	12998021	CAGE_peak_1_at_KLF1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I013076	13076223	13080722	1.6	[{'connected_gene': 'LYL1', 'score': 19.78}, {'connected_gene': 'KLF1', 'score': 12.91}, {'connected_gene': 'PRDX2', 'score': 4.22}, {'connected_gene': 'STX10', 'score': 1.76}, {'connected_gene': 'ZNF490', 'score': 1.33}, {'connected_gene': 'ENSG00000279044', 'score': 0.77}, {'connected_gene': 'ENSG00000267610', 'score': 0.44}, {'connected_gene': 'NFIX', 'score': 0.18}]
chr19	GH19I012880	12880518	12886604	2.74	[{'connected_gene': 'DNASE2', 'score': 588.37}, {'connected_gene': 'MAN2B1', 'score': 5.26}, {'connected_gene': 'CALR', 'score': 4.96}, {'connected_gene': 'KLF1', 'score': 3.21}, {'connected_gene': 'ZNF490', 'score': 1.26}, {'connected_gene': 'LYL1', 'score': 1.22}, {'connected_gene': 'ENSG00000267735', 'score': 0.77}]
chr19	GH19I012887	12887188	12887247	1.28	[{'connected_gene': 'KLF1', 'score': 550.77}, {'connected_gene': 'GCDH', 'score': 0.77}]