PPI network (data source: BioGrid)

Symbol A GeneA coding DNM count Symbol B GeneB coding DNM count Interaction detection method Publication Evidence
SIRT7 1 HIST2H2AC 1 pull down Ford E (2006) 1
TRIM25 5 KANSL1 11 affinity chromatography technology Choudhury NR (2017) 1
EED 1 BMI1 0 affinity chromatography technology, imaging technique, pull down, affinity chromatography technology Cao Q (2014), Cao Q (2014), Cao Q (2014), Cao Q (2014) 4
SMC1A 15 RAD21 3 affinity chromatography technology, imaging technique, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Gregson HC (2001), Austin C (2009), Gandhi R (2006), Panigrahi AK (2011), Panigrahi AK (2011), Panigrahi AK (2011), Holzmann J (2011), Hauf S (2005), Havugimana PC (2012), Wan C (2015), Hein MY (2015), Hein MY (2015), Huttlin EL (2017) 13
NCL 1 SMC3 16 affinity chromatography technology Salvetti A (2016) 1
SIRT7 1 H2AFX 1 affinity chromatography technology Tsai YC (2012) 1
EED 1 NCL 1 affinity chromatography technology Cao Q (2014) 1
NPM1 0 FBL 1 affinity chromatography technology Hein MY (2015) 1
SUZ12 0 YY1 7 affinity chromatography technology Cao Q (2014) 1
TFAP4 3 SIN3A 13 affinity chromatography technology Huttlin EL (2017) 1
HIST1H1A 0 ZCRB1 1 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
NCL 1 NOP53 2 affinity chromatography technology Salvetti A (2016) 1
EED 1 SMC1A 15 affinity chromatography technology Cao Q (2014) 1
SMAD3 1 CHD8 44 affinity chromatography technology Brown KA (2008) 1
CTCF 15 SIN3A 13 pull down Lutz M (2000) 1
IFI16 1 5430 0 affinity chromatography technology Diner BA (2015) 1
EED 1 ZMYM2 5 affinity chromatography technology Cao Q (2014) 1
5430 0 HIRA 5 affinity chromatography technology, imaging technique Ray-Gallet D (2011), Pchelintsev NA (2013) 2
NPM1 0 HIST1H1A 0 affinity chromatography technology Park G (2010) 1
BMI1 0 NCL 1 affinity chromatography technology Cao Q (2014) 1
EED 1 5430 0 affinity chromatography technology Cao Q (2014) 1
TRIM25 5 EIPR1 1 affinity chromatography technology Choudhury NR (2017) 1
ZBTB48 3 HIRA 5 affinity chromatography technology Huttlin EL (2017) 1
RAD21 3 CTCF 15 affinity chromatography technology Stedman W (2008) 1
FBL 1 NCL 1 affinity chromatography technology Padilla PI (2008) 1
BMI1 0 FBL 1 affinity chromatography technology Cao Q (2014) 1
KPNA2 0 ZBTB33 1 affinity chromatography technology, affinity chromatography technology Kelly KF (2004), Kelly KF (2004) 2
ZBTB48 3 HIST1H1A 0 affinity chromatography technology Huttlin EL (2017) 1
TOP2A 2 TOP2B 9 pull down, biochemical Biersack H (1996), Havugimana PC (2012) 2
ZMYM4 4 CTCF 15 two hybrid Rolland T (2014) 1
SIRT7 1 HIST1H1E 5 affinity chromatography technology Tsai YC (2012) 1
BMI1 0 YY1 7 affinity chromatography technology Cao Q (2014) 1
LMNA 2 FBL 1 affinity chromatography technology Depreux FF (2015) 1
TRIM25 5 RXRA 1 affinity chromatography technology Choudhury NR (2017) 1
NPM1 0 PUM3 0 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017) 3
NPM1 0 PARP1 3 affinity chromatography technology Haindl M (2008) 1
HIST1H1A 0 SUZ12 0 pull down Martin C (2006) 1
ZCRB1 1 CTCF 15 affinity chromatography technology Huttlin EL (2017) 1
LMNA 2 HIST1H1A 0 affinity chromatography technology Depreux FF (2015) 1
TAF3 0 KPNA2 0 pull down Soutoglou E (2005) 1
CHMP4B 2 CTCF 15 affinity chromatography technology Hein MY (2015) 1
NPM1 0 HIST2H2AC 1 pull down Swaminathan V (2005) 1
BMI1 0 LMNA 2 affinity chromatography technology Abdouh M (2016) 1
LMNA 2 TOP2A 2 bioid Roux KJ (2012) 1
CAND1 2 5430 0 affinity chromatography technology Bennett EJ (2010) 1
SIRT7 1 CTCF 15 affinity chromatography technology Tsai YC (2012) 1
SIRT7 1 CHD8 44 affinity chromatography technology Tsai YC (2012) 1
SIRT7 1 HIST1H1A 0 affinity chromatography technology Tsai YC (2012) 1
EED 1 PUM3 0 affinity chromatography technology Cao Q (2014) 1
CHD7 22 CTCF 15 unspecified method Allen MD (2007) 1
SMC3 16 CTCF 15 affinity chromatography technology Kang H (2011) 1
RAD21 3 SMC3 16 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Kim HS (2010), Kueng S (2006), Kueng S (2006), Kueng S (2006), Schmitz J (2007), Schmitz J (2007), Losada A (2005), Losada A (2000), Panigrahi AK (2011), Panigrahi AK (2011), Kang H (2011), Holzmann J (2011), Hauf S (2005), Havugimana PC (2012), Seitan VC (2006), Nishiyama T (2010), Wan C (2015), Hein MY (2015), Hein MY (2015), Huttlin EL (2017) 20
NPM1 0 TAF3 0 affinity chromatography technology Chen R (2013) 1
SUZ12 0 FBL 1 affinity chromatography technology Cao Q (2014) 1
CDK19 1 CTCF 15 biochemical Havugimana PC (2012) 1
CAND1 2 KPNA2 0 affinity chromatography technology Bennett EJ (2010) 1
BMI1 0 DGCR8 4 affinity chromatography technology Cao Q (2014) 1
NCL 1 YY1 7 biochemical Havugimana PC (2012) 1
SMC1A 15 CTCF 15 affinity chromatography technology Stedman W (2008) 1
PRR11 3 PUM3 0 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
NPM1 0 NOP53 2 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
H2AFX 1 CTCF 15 affinity chromatography technology Huttlin EL (2017) 1
TRIM25 5 ZMYM2 5 affinity chromatography technology Choudhury NR (2017) 1
DGCR8 4 PUM3 0 affinity chromatography technology Huttlin EL (2017) 1
CTCF 15 ZMYM2 5 biochemical Havugimana PC (2012) 1
ZCRB1 1 HIST1H1E 5 affinity chromatography technology Huttlin EL (2017) 1
YY1 7 CTCF 15 affinity chromatography technology Donohoe ME (2007) 1
PUM3 0 CTCF 15 affinity chromatography technology Huttlin EL (2017) 1
BMI1 0 TRIM25 5 affinity chromatography technology Cao Q (2014) 1
ZNF2 1 PUM3 0 affinity chromatography technology Huttlin EL (2017) 1
LMNA 2 NCL 1 bioid, biochemical, affinity chromatography technology Roux KJ (2012), Kristensen AR (2012), Depreux FF (2015) 3
H2AFX 1 NPM1 0 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Du YC (2006), Du YC (2006), Huttlin EL (2015), Huttlin EL (2017) 4
SET 8 HIST1H1A 0 affinity chromatography technology Kato K (2011) 1
CTCF 15 KPNA2 0 affinity chromatography technology Yusufzai TM (2004) 1
TRIM25 5 YY1 7 affinity chromatography technology Choudhury NR (2017) 1
RXRA 1 5430 0 imaging technique Sinkkonen L (2005) 1
NCL 1 TRIM25 5 affinity chromatography technology Salvetti A (2016) 1
5430 0 SMC3 16 affinity chromatography technology Kang H (2011) 1
CHD7 22 CHD8 44 two hybrid, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, two hybrid, two hybrid Batsukh T (2010), Batsukh T (2010), Batsukh T (2010), Schulz Y (2014), Schulz Y (2014), Schulz Y (2014), Schulz Y (2014) 7
LMNA 2 H2AFZ 1 affinity chromatography technology Depreux FF (2015) 1
CTCF 15 HIST2H2AC 1 affinity chromatography technology Yusufzai TM (2004) 1
H2AFX 1 BMI1 0 imaging technique, affinity chromatography technology, affinity chromatography technology, enzymatic study Ginjala V (2011), Pan MR (2011), Pan MR (2011), Pan MR (2011) 4
BMI1 0 YBX1 1 affinity chromatography technology Cao Q (2014) 1
5430 0 CTCF 15 affinity chromatography technology, biochemical, affinity chromatography technology, pull down, affinity chromatography technology Chernukhin I (2007), Chernukhin I (2007), Chernukhin I (2007), Chernukhin I (2007), Kang H (2011) 5
CTCF 15 TOP2A 2 affinity chromatography technology Yusufzai TM (2004) 1
CAND1 2 NCL 1 affinity chromatography technology Bennett EJ (2010) 1
CAND1 2 CTCF 15 affinity chromatography technology Bennett EJ (2010) 1
TRIM25 5 SMAD3 1 affinity chromatography technology Choudhury NR (2017) 1
TRIM25 5 CHD7 22 affinity chromatography technology Choudhury NR (2017) 1
TRIM25 5 CTCF 15 affinity chromatography technology Choudhury NR (2017) 1
CTCF 15 KANSL1 11 biochemical Havugimana PC (2012) 1
KPNA2 0 KPNA4 0 biochemical, biochemical Kristensen AR (2012), Wan C (2015) 2
SIRT7 1 5430 0 affinity chromatography technology Tsai YC (2012) 1
BMI1 0 PARP1 3 affinity chromatography technology Facchino S (2010) 1
ZCRB1 1 NOP53 2 affinity chromatography technology Huttlin EL (2017) 1
PRR11 3 ZCRB1 1 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
SUZ12 0 TRIM25 5 affinity chromatography technology, affinity chromatography technology Cao Q (2014), Choudhury NR (2017) 2
EED 1 LMNA 2 affinity chromatography technology Cao Q (2014) 1
BMI1 0 HIST1H1A 0 affinity chromatography technology Abdouh M (2016) 1
EED 1 YY1 7 affinity chromatography technology, affinity chromatography technology, pull down, two hybrid Satijn DP (2001), Satijn DP (2001), Satijn DP (2001), Satijn DP (2001) 4
HIST1H1A 0 EED 1 pull down Martin C (2006) 1
H2AFX 1 YBX1 1 affinity chromatography technology Huttlin EL (2017) 1
NCL 1 SMC1A 15 affinity chromatography technology Salvetti A (2016) 1
HIST1H1E 5 CTCF 15 affinity chromatography technology Huttlin EL (2017) 1
H2AFX 1 5430 0 affinity chromatography technology Mischo HE (2005) 1
TAF3 0 CTCF 15 affinity chromatography technology Liu Z (2011) 1
SUZ12 0 YBX1 1 affinity chromatography technology Cao Q (2014) 1
SIRT7 1 CHD7 22 affinity chromatography technology Tsai YC (2012) 1
FBL 1 CTCF 15 affinity chromatography technology Huttlin EL (2015) 1
TRIM25 5 HIRA 5 affinity chromatography technology Choudhury NR (2017) 1
NCL 1 NPM1 0 affinity chromatography technology, pull down, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology Li YP (1996), Li YP (1996), Park G (2010), Okuwaki M (2012), Havugimana PC (2012), Yu Y (2006), Huttlin EL (2017) 7
PARP1 3 TOP2B 9 affinity chromatography technology Ju BG (2006) 1
PARP1 3 HIST1H1A 0 enzymatic study Wang XG (2007) 1
CTCF 15 KPNA4 0 affinity chromatography technology Yusufzai TM (2004) 1
LMNA 2 NPM1 0 affinity chromatography technology Depreux FF (2015) 1
EED 1 SUZ12 0 biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Pasini D (2004), Cao R (2004), Margueron R (2008), Margueron R (2008), Shen X (2008), Pasini D (2008), Sarma K (2008), Pasini D (2010), Pasini D (2010), Cao Q (2014), Cao Q (2014), Cao Q (2014), Cao Q (2014), Cao Q (2014), Hein MY (2015), Chan YS (2013), Huttlin EL (2017), Zhang H (2016), Zhang H (2016), Wang X (2017), Hauri S (2016), Hauri S (2016) 22
ZUFSP 0 EIPR1 1 affinity chromatography technology Kwasna D (2018) 1
SIRT7 1 NPM1 0 affinity chromatography technology Tsai YC (2012) 1
5430 0 SMC1A 15 affinity chromatography technology Kang H (2011) 1
H2AFX 1 PARP1 3 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Du YC (2006), Du YC (2006), Heo K (2008), Heo K (2008), Heo K (2008), Yang X (2010), Yang X (2010), Huttlin EL (2017) 8
BMI1 0 HIST2H2AC 1 enzymatic study, enzymatic study Li Z (2006), Bentley ML (2011) 2
SIRT7 1 LMNA 2 affinity chromatography technology Tsai YC (2012) 1
TFAP4 3 CTCF 15 affinity chromatography technology, affinity chromatography technology Ku WC (2009), Ku WC (2009) 2
NPM1 0 YBX1 1 affinity chromatography technology, affinity chromatography technology Park G (2010), Chen R (2013) 2
LMNA 2 CHD8 44 bioid Roux KJ (2012) 1
CTCF 15 SMAD3 1 affinity chromatography technology, affinity chromatography technology, pull down Bergstroem R (2010), Bergstroem R (2010), Bergstroem R (2010) 3
CTCF 15 NCL 1 affinity chromatography technology Witcher M (2009) 1
NOP53 2 CTCF 15 affinity chromatography technology Huttlin EL (2017) 1
SMC1A 15 SMC3 16 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Kim ST (2002), Lee J (2003), Lee J (2003), Schmiesing JA (1998), Gregson HC (2001), Kueng S (2006), Schmitz J (2007), Schmitz J (2007), Losada A (2000), Kang H (2011), Havugimana PC (2012), Wan C (2015), Hein MY (2015), Hein MY (2015), Boldt K (2016) 15
CTCF 15 SET 8 affinity chromatography technology Yusufzai TM (2004) 1
EED 1 RAD21 3 affinity chromatography technology Cao Q (2014) 1
EED 1 CTCF 15 affinity chromatography technology Cao Q (2014) 1
SIRT7 1 PUM3 0 affinity chromatography technology Tsai YC (2012) 1
TRIM25 5 KPNA2 0 affinity chromatography technology Choudhury NR (2017) 1
RAD21 3 YBX1 1 affinity chromatography technology Panigrahi AK (2011) 1
SMAD3 1 SIN3A 13 pull down Liberati NT (2001) 1
SIRT7 1 NOP53 2 affinity chromatography technology Tsai YC (2012) 1
DGCR8 4 NCL 1 affinity chromatography technology, affinity chromatography technology Shiohama A (2007), Shiohama A (2007) 2
PUM3 0 NOP53 2 biochemical, affinity chromatography technology Wan C (2015), Huttlin EL (2017) 2
CTCF 15 SUZ12 0 affinity chromatography technology, pull down, two hybrid, pull down Li T (2008), Li T (2008), Li T (2008), Zhang H (2011) 4
SMAD3 1 KANSL1 11 two hybrid Colland F (2004) 1
IFI16 1 CTCF 15 affinity chromatography technology Diner BA (2015) 1
CAND1 2 NPM1 0 affinity chromatography technology Bennett EJ (2010) 1
SMC3 16 CHMP4B 2 affinity chromatography technology Hein MY (2015) 1
H2AFX 1 NCL 1 pull down, pull down Kobayashi J (2012), Kobayashi J (2012) 2
TOP2A 2 BMI1 0 affinity chromatography technology Alchanati I (2009) 1
YY1 7 NPM1 0 affinity chromatography technology, pull down Mai RT (2006), Mai RT (2006) 2
CAND1 2 NOP53 2 affinity chromatography technology Bennett EJ (2010) 1
BMI1 0 KPNA2 0 affinity chromatography technology Abdouh M (2016) 1
IFI16 1 TOP2A 2 affinity chromatography technology Diner BA (2015) 1
CTCF 15 YBX1 1 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down Chernukhin IV (2000), Chernukhin IV (2000), Chernukhin IV (2000), Chernukhin IV (2000) 4
ZBTB48 3 CTCF 15 affinity chromatography technology Huttlin EL (2017) 1
CTCF 15 RXRA 1 pull down, pull down Weth O (2010), Weth O (2010) 2
CTCF 15 NPM1 0 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Yusufzai TM (2004), Yusufzai TM (2004), Yusufzai TM (2004), Witcher M (2009) 4
LMNA 2 YBX1 1 affinity chromatography technology Depreux FF (2015) 1
PUM3 0 FBL 1 biochemical Wan C (2015) 1
EIPR1 1 CTCF 15 genetic interference Blomen VA (2015) 1
SIRT7 1 FBL 1 affinity chromatography technology Tsai YC (2012) 1
SUZ12 0 SMC3 16 affinity chromatography technology Cao Q (2014) 1
TRIM25 5 NOP53 2 affinity chromatography technology Choudhury NR (2017) 1
ZUFSP 0 CTCF 15 affinity chromatography technology Kwasna D (2018) 1
H2AFX 1 LMNA 2 affinity chromatography technology, affinity chromatography technology Yang X (2010), Depreux FF (2015) 2
TRIM25 5 SIN3A 13 affinity chromatography technology Choudhury NR (2017) 1
CTCF 15 6957 0 pull down, pull down Weth O (2010), Weth O (2010) 2
LMNA 2 PARP1 3 bioid, affinity chromatography technology Roux KJ (2012), Depreux FF (2015) 2
TFAP4 3 HIRA 5 affinity chromatography technology Huttlin EL (2017) 1
ZNF2 1 CTCF 15 affinity chromatography technology Huttlin EL (2017) 1
TRIM25 5 CAND1 2 affinity chromatography technology Choudhury NR (2017) 1
NOP53 2 YBX1 1 affinity chromatography technology Huttlin EL (2017) 1
SMAD3 1 YY1 7 pull down, affinity chromatography technology Kurisaki K (2003), Brown KA (2008) 2
NCL 1 YBX1 1 affinity chromatography technology Salvetti A (2016) 1
SIRT7 1 RAD21 3 affinity chromatography technology Tsai YC (2012) 1
CTCF 15 CHD8 44 pull down, affinity chromatography technology, two hybrid Ishihara K (2006), Ishihara K (2006), Ishihara K (2006) 3
HIST1H1E 5 PUM3 0 affinity chromatography technology Huttlin EL (2017) 1
BMI1 0 CTCF 15 affinity chromatography technology Cao Q (2014) 1
IFI16 1 PUM3 0 affinity chromatography technology Diner BA (2015) 1
ZMYM2 5 ZMYM4 4 affinity chromatography technology, affinity chromatography technology Gocke CB (2008), Hauri S (2016) 2
CAND1 2 PARP1 3 affinity chromatography technology Bennett EJ (2010) 1
TRIM25 5 LMNA 2 affinity chromatography technology Choudhury NR (2017) 1
ZBTB48 3 DGCR8 4 affinity chromatography technology Huttlin EL (2017) 1
SUZ12 0 NCL 1 affinity chromatography technology Cao Q (2014) 1
TRIM25 5 YBX1 1 affinity chromatography technology Choudhury NR (2017) 1
H2AFX 1 HIST2H2AC 1 affinity chromatography technology Lee HS (2010) 1
IFI16 1 TOP2B 9 affinity chromatography technology Diner BA (2015) 1
CDK19 1 SUZ12 0 two hybrid, pull down, pull down Fukasawa R (2012), Fukasawa R (2012), Fukasawa R (2012) 3
PRR11 3 CTCF 15 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
PRR11 3 HIST1H1A 0 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
SIRT7 1 NCL 1 affinity chromatography technology Tsai YC (2012) 1
EED 1 SMC3 16 affinity chromatography technology Cao Q (2014) 1
CTCF 15 PARP1 3 affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down Farrar D (2010), Farrar D (2010), Farrar D (2010), Yusufzai TM (2004), Witcher M (2009), Witcher M (2009) 6
ZCRB1 1 YBX1 1 affinity chromatography technology Huttlin EL (2017) 1
EED 1 SIN3A 13 affinity chromatography technology Cao Q (2014) 1
LMNA 2 KPNA4 0 two hybrid Dittmer TA (2014) 1
FBL 1 ZMYM4 4 affinity chromatography technology Huttlin EL (2015) 1
ZBTB33 1 CTCF 15 affinity chromatography technology Defossez PA (2005) 1
DGCR8 4 CTCF 15 affinity chromatography technology Huttlin EL (2017) 1
RHOU 0 CTCF 15 pull down Dart AE (2015) 1
EED 1 FBL 1 affinity chromatography technology Cao Q (2014) 1
HIRA 5 CTCF 15 affinity chromatography technology Pchelintsev NA (2013) 1
LMNA 2 ZBTB33 1 bioid Roux KJ (2012) 1
HIST1H1A 0 PUM3 0 affinity chromatography technology Huttlin EL (2017) 1
CAND1 2 YBX1 1 affinity chromatography technology Bennett EJ (2010) 1
CTCF 15 LMNA 2 affinity chromatography technology Yusufzai TM (2004) 1
CTCF 15 TOP2B 9 affinity chromatography technology Witcher M (2009) 1
HIST2H2AC 1 NCL 1 pull down Angelov D (2006) 1
HIST1H1A 0 CTCF 15 affinity chromatography technology Huttlin EL (2015) 1
CTCF 15 H2AFZ 1 affinity chromatography technology Yusufzai TM (2004) 1
PRR11 3 NOP53 2 affinity chromatography technology Huttlin EL (2015) 1