PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000317735	[[110749149, 110749289], [110754294, 110754485], [110756521, 110756621], [110757162, 110757316], [110758592, 110758761], [110763624, 110763803], [110765238, 110765760]]	[[110749183, 110749289], [110754294, 110754485], [110756521, 110756621], [110757162, 110757316], [110758592, 110758761], [110763624, 110763803], [110765238, 110765353]]
NM_006583	[[110749149, 110749289], [110754294, 110754485], [110756521, 110756621], [110757162, 110757316], [110758592, 110758761], [110763624, 110763803], [110765238, 110765863]]	[[110749183, 110749289], [110754294, 110754485], [110756521, 110756621], [110757162, 110757316], [110758592, 110758761], [110763624, 110763803], [110765238, 110765353]]

Promoter

Chrom	Start	End	Description
chr4	110749110	110749115	CAGE_peak_4_at_RRH_5end
chr4	110749119	110749137	CAGE_peak_1_at_RRH_5end
chr4	110749143	110749155	CAGE_peak_2_at_RRH_5end
chr4	110749176	110749185	CAGE_peak_3_at_RRH_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I109848	109848058	109848117	0.61	[{'connected_gene': 'LRIT3', 'score': 550.77}, {'connected_gene': 'EGF', 'score': 9.58}, {'connected_gene': 'RRH', 'score': 0.34}]
chr4	GH04I109827	109827945	109828004	0.5	[{'connected_gene': 'RRH', 'score': 550.77}, {'connected_gene': 'GC04M109825', 'score': 0.77}]
chr4	GH04I108830	108830705	108830854	0.76	[{'connected_gene': 'SEC24B-AS1', 'score': 22.12}, {'connected_gene': 'CYP2U1', 'score': 22.11}, {'connected_gene': 'RBMXP4', 'score': 12.4}, {'connected_gene': 'COL25A1', 'score': 11.57}, {'connected_gene': 'ZCCHC23', 'score': 11.57}, {'connected_gene': 'RRH', 'score': 10.7}, {'connected_gene': 'ETNPPL', 'score': 10.39}, {'connected_gene': 'GC04M108805', 'score': 0.34}, {'connected_gene': 'GC04M108908', 'score': 0.16}]