PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000574641	[[186369703, 186370587]]	[[186370177, 186370312]]
NM_022375	[[186369703, 186370587]]	[[186370177, 186370312]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I186073	186073788	186074222	0.34	[{'connected_gene': 'HMCN1', 'score': 20.44}, {'connected_gene': 'OCLM', 'score': 4.45}, {'connected_gene': 'ENSG00000224691', 'score': 0.15}, {'connected_gene': 'GC01M185927', 'score': 0.11}]
chr1	GH01I186373	186373510	186377187	2.13	[{'connected_gene': 'TPR', 'score': 625.41}, {'connected_gene': 'ODR4', 'score': 558.18}, {'connected_gene': 'OCLM', 'score': 48.51}, {'connected_gene': 'ENSG00000228238', 'score': 5.29}, {'connected_gene': 'GC01P186372', 'score': 0.77}, {'connected_gene': 'GC01M186369', 'score': 0.18}]
chr1	GH01I187041	187041030	187044493	0.6	[{'connected_gene': 'TPR', 'score': 29.71}, {'connected_gene': 'OCLM', 'score': 25.02}, {'connected_gene': 'GC01P187071', 'score': 0.31}, {'connected_gene': 'PLA2G4A', 'score': 0.08}]
chr1	GH01I186212	186212600	186212878	1.07	[{'connected_gene': 'TPR', 'score': 19.78}, {'connected_gene': 'OCLM', 'score': 11.85}, {'connected_gene': 'PACERR', 'score': 4.38}, {'connected_gene': 'LOC105371654', 'score': 0.44}, {'connected_gene': 'ENSG00000224691', 'score': 0.28}]
chr1	GH01I185404	185403001	185403200	0.38	[{'connected_gene': 'TPR', 'score': 19.71}, {'connected_gene': 'OCLM', 'score': 11.79}, {'connected_gene': 'LOC100422414', 'score': 5.34}, {'connected_gene': 'LOC102724897', 'score': 0.29}, {'connected_gene': 'RNU7-183P', 'score': 0.29}]
chr1	GH01I186404	186404169	186405519	0.65	[{'connected_gene': 'ODR4', 'score': 10.92}, {'connected_gene': 'OCLM', 'score': 0.77}, {'connected_gene': 'GC01P186425', 'score': 0.34}, {'connected_gene': 'GC01M186369', 'score': 0.25}]
chr1	GH01I186828	186828329	186830899	2.06	[{'connected_gene': 'PLA2G4A', 'score': 554.93}, {'connected_gene': 'TPR', 'score': 19.97}, {'connected_gene': 'OCLM', 'score': 13.15}, {'connected_gene': 'PTGS2', 'score': 4.1}, {'connected_gene': 'GC01P187071', 'score': 0.07}]
chr1	GH01I186081	186081789	186083745	1.44	[{'connected_gene': 'OCLM', 'score': 14.07}, {'connected_gene': 'TPR', 'score': 12.65}, {'connected_gene': 'ODR4', 'score': 11.33}, {'connected_gene': 'HMCN1', 'score': 9.22}, {'connected_gene': 'PDC', 'score': 1.32}, {'connected_gene': 'ENSG00000224691', 'score': 0.16}, {'connected_gene': 'GC01M185927', 'score': 0.1}]
chr1	GH01I186556	186556753	186557126	0.22	[{'connected_gene': 'ENSG00000273198', 'score': 7.42}, {'connected_gene': 'OCLM', 'score': 1.57}, {'connected_gene': 'ENSG00000228238', 'score': 0.34}]