PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000411780	[[36120873, 36121351], [36123986, 36124094], [36137505, 36137633]]	None
ENST00000447625	[[36120935, 36121351], [36123986, 36124164]]	None
ENST00000467603	[[36130815, 36130956], [36137505, 36137614], [36147633, 36147752], [36156194, 36156264]]	None
ENST00000397137	[[36145818, 36147752], [36156032, 36156134]]	[[36147312, 36147576]]
ENST00000373537	[[36145818, 36147752], [36156194, 36156333]]	[[36147312, 36147576]]
ENST00000414542	[[36145819, 36147752], [36149720, 36149853], [36156194, 36156333]]	[[36147312, 36147576]]
ENST00000397135	[[36147217, 36147752], [36155975, 36156125]]	[[36147312, 36147576]]
ENST00000397134	[[36147254, 36147752], [36148637, 36148705]]	[[36147312, 36147576]]
ENST00000397131	[[36147294, 36147752], [36152778, 36152953]]	[[36147312, 36147576]]
ENST00000432507	[[36147313, 36147752], [36148839, 36148991]]	[[36147313, 36147576]]
ENST00000445723	[[36147341, 36147752], [36149720, 36149811], [36156194, 36156280]]	[[36147341, 36147576]]
ENST00000414080	[[36147390, 36147752], [36149720, 36149853], [36156194, 36156280]]	[[36147390, 36147576]]
ENST00000456058	[[36147555, 36147752], [36149720, 36150095]]	[[36147555, 36147576]]
NM_001317075	[[36145818, 36147752], [36148637, 36148705]]	[[36147312, 36147576]]
NM_001317074	[[36145818, 36147752], [36148839, 36148991]]	[[36147312, 36147576]]
NM_001167823	[[36145818, 36147752], [36152778, 36152953]]	[[36147312, 36147576]]
NM_001167822	[[36145818, 36147752], [36155975, 36156134]]	[[36147312, 36147576]]
NM_001167821	[[36145818, 36147752], [36156032, 36156134]]	[[36147312, 36147576]]
NM_001167820	[[36145818, 36147752], [36149720, 36149853], [36156194, 36156333]]	[[36147312, 36147576]]
NM_006698	[[36145818, 36147752], [36156194, 36156333]]	[[36147312, 36147576]]

Promoter

Chrom	Start	End	Description
chr20	36152822	36152833	CAGE_peak_14_at_BLCAP_5end
chr20	36152838	36152861	CAGE_peak_4_at_BLCAP_5end
chr20	36152878	36152889	CAGE_peak_9_at_BLCAP_5end
chr20	36152914	36152926	CAGE_peak_8_at_BLCAP_5end
chr20	36156229	36156250	CAGE_peak_2_at_BLCAP_5end
chr20	36156264	36156288	CAGE_peak_1_at_BLCAP_5end
chr20	36156293	36156304	CAGE_peak_3_at_BLCAP_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr20	GH20I036841	36841002	36850599	1.32	[{'connected_gene': 'NDRG3', 'score': 6.9}, {'connected_gene': 'DSN1', 'score': 4.79}, {'connected_gene': 'BLCAP', 'score': 4.56}, {'connected_gene': 'SOGA1', 'score': 0.37}, {'connected_gene': 'GC20P036795', 'score': 0.23}]
chr20	GH20I036830	36830111	36837526	1.76	[{'connected_gene': 'NDRG3', 'score': 6.27}, {'connected_gene': 'BLCAP', 'score': 4.26}, {'connected_gene': 'RBL1', 'score': 2.87}, {'connected_gene': 'DSN1', 'score': 2.08}, {'connected_gene': 'SOGA1', 'score': 0.31}, {'connected_gene': 'GC20P036795', 'score': 0.28}]
chr20	GH20I037506	37506439	37506530	0.46	[{'connected_gene': 'NNAT', 'score': 0.39}, {'connected_gene': 'BLCAP', 'score': 0.34}, {'connected_gene': 'GC20P037451', 'score': 0.23}]
chr20	GH20I037507	37507007	37507280	0.49	[{'connected_gene': 'NNAT', 'score': 0.39}, {'connected_gene': 'BLCAP', 'score': 0.34}, {'connected_gene': 'GC20P037451', 'score': 0.22}]
chr20	GH20I037504	37504224	37504628	0.79	[{'connected_gene': 'SNHG17', 'score': 13.82}, {'connected_gene': 'SNORA71C', 'score': 13.08}, {'connected_gene': 'RBL1', 'score': 12.46}, {'connected_gene': 'RALGAPB', 'score': 12.29}, {'connected_gene': 'RPRD1B', 'score': 11.91}, {'connected_gene': 'TTI1', 'score': 10.54}, {'connected_gene': 'SNORA71A', 'score': 10.17}, {'connected_gene': 'BLCAP', 'score': 7.46}, {'connected_gene': 'NNAT', 'score': 0.37}, {'connected_gene': 'GC20P037451', 'score': 0.23}]
chr20	GH20I037539	37539936	37542839	0.88	[{'connected_gene': 'SNHG17', 'score': 15.55}, {'connected_gene': 'RALGAPB', 'score': 13.42}, {'connected_gene': 'SNORA71C', 'score': 13.38}, {'connected_gene': 'GHRH', 'score': 11.22}, {'connected_gene': 'MROH8', 'score': 10.6}, {'connected_gene': 'RPN2', 'score': 10.6}, {'connected_gene': 'RBL1', 'score': 10.49}, {'connected_gene': 'TTI1', 'score': 9.8}, {'connected_gene': 'BLCAP', 'score': 8.3}, {'connected_gene': 'PPIAP3', 'score': 0.39}, {'connected_gene': 'LINC01746', 'score': 0.31}]
chr20	GH20I037535	37535282	37536715	0.67	[{'connected_gene': 'GHRH', 'score': 11.11}, {'connected_gene': 'MROH8', 'score': 10.6}, {'connected_gene': 'RPN2', 'score': 10.6}, {'connected_gene': 'BLCAP', 'score': 8.31}, {'connected_gene': 'PPIAP3', 'score': 0.44}, {'connected_gene': 'LINC01746', 'score': 0.28}]
chr20	GH20I037516	37516051	37529159	2.82	[{'connected_gene': 'BLCAP', 'score': 560.33}, {'connected_gene': 'NNAT', 'score': 550.77}, {'connected_gene': 'RALGAPB', 'score': 16.31}, {'connected_gene': 'TTI1', 'score': 15.98}, {'connected_gene': 'RBL1', 'score': 14.73}, {'connected_gene': 'SNHG17', 'score': 14.33}, {'connected_gene': 'SOGA1', 'score': 12.17}, {'connected_gene': 'SNORA71C', 'score': 10.51}, {'connected_gene': 'MROH8', 'score': 10.38}, {'connected_gene': 'RPN2', 'score': 10.38}, {'connected_gene': 'DSN1', 'score': 10.04}, {'connected_gene': 'ENSG00000276603', 'score': 0.77}]
chr20	GH20I037511	37511269	37512895	0.2	[{'connected_gene': 'BLCAP', 'score': 7.56}, {'connected_gene': 'NNAT', 'score': 0.44}, {'connected_gene': 'GC20P037451', 'score': 0.21}]
chr20	GH20I037534	37534323	37535168	1.05	[{'connected_gene': 'BLCAP', 'score': 7.61}, {'connected_gene': 'PPIAP3', 'score': 0.77}, {'connected_gene': 'LINC01746', 'score': 0.28}]
chr20	GH20I037264	37264588	37265829	0.68	[{'connected_gene': 'BLCAP', 'score': 5.61}, {'connected_gene': 'MROH8', 'score': 5.04}, {'connected_gene': 'GHRH', 'score': 0.77}, {'connected_gene': 'GC20P037270', 'score': 0.44}, {'connected_gene': 'GC20M037240', 'score': 0.18}]