PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_032102	[[94800040, 94800901], [94800903, 94804387]]	[[94800390, 94800901], [94800903, 94801238]]
NR_103726	[[94800040, 94801346], [94801817, 94804387]]	None

Promoter

Chrom	Start	End	Description
chr11	94800972	94801064	CAGE_peak_3_at_SRSF8_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I095088	95088429	95091308	2.13	[{'connected_gene': 'ENDOD1', 'score': 558.47}, {'connected_gene': 'GC11P095088', 'score': 550.77}, {'connected_gene': 'SRSF8', 'score': 17.07}, {'connected_gene': 'LOC101929295', 'score': 11.03}, {'connected_gene': 'KDM4E', 'score': 9.77}, {'connected_gene': 'GC11P095093', 'score': 0.77}, {'connected_gene': 'GC11M095076', 'score': 0.39}]
chr11	GH11I095133	95133070	95135995	1.02	[{'connected_gene': 'ENDOD1', 'score': 23.8}, {'connected_gene': 'BUD13P1', 'score': 15.6}, {'connected_gene': 'ENSG00000270578', 'score': 13.63}, {'connected_gene': 'CWC15', 'score': 10.44}, {'connected_gene': 'KDM4D', 'score': 10.44}, {'connected_gene': 'KDM4E', 'score': 9.76}, {'connected_gene': 'SRSF8', 'score': 4.99}, {'connected_gene': 'LOC105369435', 'score': 4.66}, {'connected_gene': 'GC11P095138', 'score': 0.77}, {'connected_gene': 'GC11M095076', 'score': 0.29}]
chr11	GH11I095066	95066276	95069947	2.28	[{'connected_gene': 'SRSF8', 'score': 563.59}, {'connected_gene': 'GC11P095067', 'score': 550.77}, {'connected_gene': 'GC11M095066', 'score': 550.77}, {'connected_gene': 'ENDOD1', 'score': 17.07}, {'connected_gene': 'LOC101929295', 'score': 11.86}, {'connected_gene': 'KDM4E', 'score': 10.68}, {'connected_gene': 'CWC15', 'score': 10.61}, {'connected_gene': 'KDM4D', 'score': 10.61}, {'connected_gene': 'MTMR2', 'score': 10.42}, {'connected_gene': 'GC11P095083', 'score': 0.37}]
chr11	GH11I095077	95077821	95079302	0.31	[{'connected_gene': 'SRSF8', 'score': 12.78}, {'connected_gene': 'ENDOD1', 'score': 11.79}, {'connected_gene': 'LOC101929295', 'score': 11.63}, {'connected_gene': 'GC11P095083', 'score': 0.77}, {'connected_gene': 'GC11P095067', 'score': 0.39}, {'connected_gene': 'GC11M095076', 'score': 0.34}]
chr11	GH11I095085	95085954	95086553	0.56	[{'connected_gene': 'SRSF8', 'score': 17.36}, {'connected_gene': 'ENDOD1', 'score': 6.05}, {'connected_gene': 'GC11P095088', 'score': 0.77}, {'connected_gene': 'GC11P095083', 'score': 0.77}, {'connected_gene': 'GC11M095076', 'score': 0.37}]
chr11	GH11I095074	95074517	95075493	1.04	[{'connected_gene': 'SRSF8', 'score': 14.45}, {'connected_gene': 'LOC101929295', 'score': 11.62}, {'connected_gene': 'ENDOD1', 'score': 5.67}, {'connected_gene': 'GC11P095067', 'score': 0.44}, {'connected_gene': 'GC11P095083', 'score': 0.44}]
chr11	GH11I095080	95080052	95080870	0.2	[{'connected_gene': 'SRSF8', 'score': 12.32}, {'connected_gene': 'LOC101929295', 'score': 11.63}, {'connected_gene': 'ENDOD1', 'score': 8.77}, {'connected_gene': 'GC11P095083', 'score': 0.77}, {'connected_gene': 'GC11P095067', 'score': 0.39}, {'connected_gene': 'GC11M095076', 'score': 0.34}]
chr11	GH11I095146	95146608	95154450	2.25	[{'connected_gene': 'LOC101929295', 'score': 556.79}, {'connected_gene': 'CEP57', 'score': 20.31}, {'connected_gene': 'FAM76B', 'score': 16.44}, {'connected_gene': 'FGFR3P2', 'score': 15.64}, {'connected_gene': 'SESN3', 'score': 15.61}, {'connected_gene': 'ANKRD49', 'score': 13.94}, {'connected_gene': 'MRE11', 'score': 12.94}, {'connected_gene': 'SRSF8', 'score': 7.48}, {'connected_gene': 'ENDOD1', 'score': 6.65}, {'connected_gene': 'LOC105369435', 'score': 5.31}, {'connected_gene': 'CWC15', 'score': 1.93}, {'connected_gene': 'KDM4E', 'score': 1.7}, {'connected_gene': 'ENSG00000270578', 'score': 0.44}]
chr11	GH11I095103	95102917	95105789	0.72	[{'connected_gene': 'LOC101929295', 'score': 11.17}, {'connected_gene': 'KDM4E', 'score': 10.27}, {'connected_gene': 'CWC15', 'score': 9.3}, {'connected_gene': 'KDM4D', 'score': 9.3}, {'connected_gene': 'SRSF8', 'score': 6.8}, {'connected_gene': 'ENDOD1', 'score': 4.81}, {'connected_gene': 'GC11M095076', 'score': 0.77}, {'connected_gene': 'GC11P095138', 'score': 0.29}]
chr11	GH11I095100	95100817	95102538	0.76	[{'connected_gene': 'GC11M095076', 'score': 550.77}, {'connected_gene': 'ENDOD1', 'score': 12.63}, {'connected_gene': 'LOC101929295', 'score': 11.02}, {'connected_gene': 'SRSF8', 'score': 5.38}, {'connected_gene': 'GC11P095093', 'score': 0.44}]
chr11	GH11I095555	95555613	95557179	0.96	[{'connected_gene': 'GC11M095547', 'score': 550.77}, {'connected_gene': 'SESN3', 'score': 10.08}, {'connected_gene': 'LOC101929295', 'score': 10.07}, {'connected_gene': 'SRSF8', 'score': 4.8}, {'connected_gene': 'GC11M095524', 'score': 0.29}]
chr11	GH11I095084	95084562	95085822	0.65	[{'connected_gene': 'GC11P095083', 'score': 550.77}, {'connected_gene': 'SRSF8', 'score': 17.59}, {'connected_gene': 'ENDOD1', 'score': 7.45}, {'connected_gene': 'GC11P095088', 'score': 0.77}, {'connected_gene': 'GC11M095076', 'score': 0.37}]
chr11	GH11I095091	95091362	95094060	1.45	[{'connected_gene': 'GC11P095093', 'score': 550.77}, {'connected_gene': 'LOC101929295', 'score': 11.04}, {'connected_gene': 'KDM4E', 'score': 9.77}, {'connected_gene': 'ENDOD1', 'score': 8.46}, {'connected_gene': 'SRSF8', 'score': 7.01}, {'connected_gene': 'GC11M095076', 'score': 0.44}]