PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000368921	[[151030233, 151033029], [151039694, 151040970]]	[[151039700, 151039973]]
NM_006818	[[151032150, 151033029], [151039694, 151040973]]	[[151039700, 151039973]]

Promoter

Chrom	Start	End	Description
chr1	151030388	151030419	CAGE_peak_9_at_MLLT11_5end
chr1	151030536	151030549	CAGE_peak_8_at_MLLT11_5end
chr1	151032142	151032195	CAGE_peak_5_at_MLLT11_5end
chr1	151032739	151032748	CAGE_peak_6_at_MLLT11_5end
chr1	151032782	151032801	CAGE_peak_4_at_MLLT11_5end
chr1	151032833	151032850	CAGE_peak_3_at_MLLT11_5end
chr1	151032860	151032918	CAGE_peak_1_at_MLLT11_5end
chr1	151032922	151032951	CAGE_peak_2_at_MLLT11_5end
chr1	151032957	151032968	CAGE_peak_7_at_MLLT11_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I150602	150602878	150606941	1.82	[{'connected_gene': 'HORMAD1', 'score': 24.46}, {'connected_gene': 'PRPF3', 'score': 22.48}, {'connected_gene': 'MCL1', 'score': 13.04}, {'connected_gene': 'CTSS', 'score': 7.73}, {'connected_gene': 'PLEKHO1', 'score': 7.3}, {'connected_gene': 'MLLT11', 'score': 4.35}, {'connected_gene': 'CDC42SE1', 'score': 2.8}, {'connected_gene': 'MINDY1', 'score': 1.37}, {'connected_gene': 'ENSG00000253047', 'score': 0.77}, {'connected_gene': 'ENSG00000276103', 'score': 0.77}, {'connected_gene': 'ENSA', 'score': 0.34}]
chr1	GH01I151002	151002366	151003022	0.4	[{'connected_gene': 'CDC42SE1', 'score': 16.68}, {'connected_gene': 'CERS2', 'score': 11.29}, {'connected_gene': 'SEMA6C', 'score': 11.27}, {'connected_gene': 'MLLT11', 'score': 11.17}, {'connected_gene': 'BNIPL', 'score': 11.11}, {'connected_gene': 'C1orf56', 'score': 11.06}, {'connected_gene': 'ENSG00000231073', 'score': 10.99}, {'connected_gene': 'MINDY1', 'score': 0.44}, {'connected_gene': 'ANXA9', 'score': 0.34}]
chr1	GH01I151064	151064601	151064800	0.4	[{'connected_gene': 'CDC42SE1', 'score': 0.44}, {'connected_gene': 'MLLT11', 'score': 0.44}]
chr1	GH01I151051	151051433	151053356	0.88	[{'connected_gene': 'C1orf56', 'score': 0.77}, {'connected_gene': 'MLLT11', 'score': 0.44}, {'connected_gene': 'CDC42SE1', 'score': 0.37}]
chr1	GH01I151047	151047105	151049214	2.15	[{'connected_gene': 'C1orf56', 'score': 550.77}, {'connected_gene': 'SEMA6C', 'score': 12.08}, {'connected_gene': 'CTSS', 'score': 4.54}, {'connected_gene': 'MLLT11', 'score': 0.44}, {'connected_gene': 'BNIPL', 'score': 0.39}]
chr1	GH01I151054	151054067	151063940	2.53	[{'connected_gene': 'MLLT11', 'score': 550.77}, {'connected_gene': 'CDC42SE1', 'score': 550.39}, {'connected_gene': 'SETDB1', 'score': 79.74}, {'connected_gene': 'PRPF3', 'score': 70.84}, {'connected_gene': 'ARNT', 'score': 56.35}, {'connected_gene': 'PI4KB', 'score': 54.9}, {'connected_gene': 'ZNF687', 'score': 51.93}, {'connected_gene': 'GABPB2', 'score': 51.68}, {'connected_gene': 'PIP5K1A', 'score': 51.53}, {'connected_gene': 'UBE2D3P3', 'score': 49.88}, {'connected_gene': 'GOLPH3L', 'score': 39.46}, {'connected_gene': 'CTSK', 'score': 35.96}, {'connected_gene': 'MRPL9', 'score': 28.66}, {'connected_gene': 'BNIPL', 'score': 24.37}, {'connected_gene': 'PSMB4', 'score': 18.2}, {'connected_gene': 'RN7SL444P', 'score': 18.17}, {'connected_gene': 'RPS10P6', 'score': 11.81}, {'connected_gene': 'FALEC', 'score': 11.44}, {'connected_gene': 'RPRD2', 'score': 10.95}, {'connected_gene': 'ENSG00000229021', 'score': 9.93}, {'connected_gene': 'APH1A', 'score': 9.86}, {'connected_gene': 'PSMD4', 'score': 5.6}, {'connected_gene': 'ECM1', 'score': 3.97}]
chr1	GH01I151986	151986391	152002574	2.84	[{'connected_gene': 'ENSG00000229021', 'score': 570.66}, {'connected_gene': 'S100A10', 'score': 556.65}, {'connected_gene': 'THEM4', 'score': 30.06}, {'connected_gene': 'S100A11', 'score': 11.77}, {'connected_gene': 'THEM5', 'score': 10.35}, {'connected_gene': 'FLG-AS1', 'score': 4.3}, {'connected_gene': 'MLLT11', 'score': 3.85}, {'connected_gene': 'LOC105371441', 'score': 0.44}]