PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

There is no corresponding data published yet, we will update it when such data available.

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I058495	58495755	58497801	0.49	[{'connected_gene': 'ACOX2', 'score': 11.19}, {'connected_gene': 'PXK', 'score': 11.02}, {'connected_gene': 'HTD2', 'score': 10.58}, {'connected_gene': 'RPP14', 'score': 10.58}, {'connected_gene': 'ENSG00000243384', 'score': 9.88}, {'connected_gene': 'FAM107A', 'score': 9.82}, {'connected_gene': 'ENSG00000272360', 'score': 8.79}, {'connected_gene': 'ABHD6', 'score': 7.76}, {'connected_gene': 'KCTD6', 'score': 0.77}, {'connected_gene': 'RPL27P9', 'score': 0.39}]
chr3	GH03I058556	58556895	58558707	0.65	[{'connected_gene': 'ACOX2', 'score': 17.64}, {'connected_gene': 'FAM107A', 'score': 12.05}, {'connected_gene': 'FAM3D-AS1', 'score': 11.5}, {'connected_gene': 'HTD2', 'score': 10.25}, {'connected_gene': 'RPP14', 'score': 10.25}, {'connected_gene': 'FAM3D', 'score': 10.04}, {'connected_gene': 'ENSG00000243384', 'score': 0.39}]
chr3	GH03I058560	58560601	58562723	0.85	[{'connected_gene': 'ACOX2', 'score': 17.69}, {'connected_gene': 'FAM3D-AS1', 'score': 11.51}, {'connected_gene': 'FAM107A', 'score': 11.29}, {'connected_gene': 'HTD2', 'score': 10.25}, {'connected_gene': 'RPP14', 'score': 10.25}, {'connected_gene': 'FAM3D', 'score': 9.63}, {'connected_gene': 'ENSG00000243384', 'score': 0.39}]
chr3	GH03I058563	58563794	58563943	0.31	[{'connected_gene': 'ACOX2', 'score': 18.26}, {'connected_gene': 'FAM3D-AS1', 'score': 11.51}, {'connected_gene': 'FAM107A', 'score': 11.3}, {'connected_gene': 'HTD2', 'score': 10.25}, {'connected_gene': 'RPP14', 'score': 10.25}, {'connected_gene': 'FAM3D', 'score': 9.63}, {'connected_gene': 'ENSG00000243384', 'score': 0.44}]
chr3	GH03I058315	58315998	58316829	0.2	[{'connected_gene': 'ABHD6', 'score': 9.92}, {'connected_gene': 'ENSG00000272182', 'score': 7.34}, {'connected_gene': 'PXK', 'score': 4.7}, {'connected_gene': 'PIR62243', 'score': 0.77}, {'connected_gene': 'HTD2', 'score': 0.39}, {'connected_gene': 'RPP14', 'score': 0.39}]
chr3	GH03I058332	58332175	58336743	2.28	[{'connected_gene': 'PXK', 'score': 560.03}, {'connected_gene': 'DENND6A', 'score': 80.28}, {'connected_gene': 'FLNB-AS1', 'score': 53.9}, {'connected_gene': 'FLNB', 'score': 51.17}, {'connected_gene': 'KCTD6', 'score': 33.91}, {'connected_gene': 'RPP14', 'score': 24.15}, {'connected_gene': 'PDE12', 'score': 22.54}, {'connected_gene': 'HTD2', 'score': 11.11}, {'connected_gene': 'FAM107A', 'score': 10.25}, {'connected_gene': 'ABHD6', 'score': 9.9}, {'connected_gene': 'ACOX2', 'score': 9.61}, {'connected_gene': 'ENSG00000272182', 'score': 7.51}, {'connected_gene': 'ENSG00000273493', 'score': 5.34}, {'connected_gene': 'LOC105377106', 'score': 0.37}]
chr3	GH03I058409	58409908	58411526	0.38	[{'connected_gene': 'PXK', 'score': 41.77}, {'connected_gene': 'RPP14', 'score': 32.24}, {'connected_gene': 'PDHB', 'score': 11.27}, {'connected_gene': 'HTD2', 'score': 11.02}, {'connected_gene': 'FLNB-AS1', 'score': 10.29}, {'connected_gene': 'FLNB', 'score': 10.27}, {'connected_gene': 'ABHD6', 'score': 7.32}, {'connected_gene': 'ENSG00000272182', 'score': 0.37}, {'connected_gene': 'ENSG00000275607', 'score': 0.29}]
chr3	GH03I058382	58382960	58389838	1.37	[{'connected_gene': 'PXK', 'score': 42.33}, {'connected_gene': 'RPP14', 'score': 33.67}, {'connected_gene': 'FAM107A', 'score': 15.98}, {'connected_gene': 'HTD2', 'score': 11.49}, {'connected_gene': 'ACOX2', 'score': 10.31}, {'connected_gene': 'ENSG00000243384', 'score': 10.17}, {'connected_gene': 'PDHB', 'score': 7.05}, {'connected_gene': 'FLNB-AS1', 'score': 4.69}, {'connected_gene': 'ENSG00000275607', 'score': 0.44}, {'connected_gene': 'ENSG00000272182', 'score': 0.26}]
chr3	GH03I058414	58414566	58415014	1.06	[{'connected_gene': 'PXK', 'score': 25.27}, {'connected_gene': 'HTD2', 'score': 12.43}, {'connected_gene': 'RPP14', 'score': 12.43}, {'connected_gene': 'ABHD6', 'score': 10.53}, {'connected_gene': 'FLNB-AS1', 'score': 10.31}, {'connected_gene': 'FLNB', 'score': 10.29}, {'connected_gene': 'ACOX2', 'score': 10.13}, {'connected_gene': 'ENSG00000272182', 'score': 0.39}, {'connected_gene': 'ENSG00000275607', 'score': 0.28}]
chr3	GH03I058518	58518160	58523994	1.18	[{'connected_gene': 'PXK', 'score': 18.23}, {'connected_gene': 'HTD2', 'score': 10.64}, {'connected_gene': 'RPP14', 'score': 10.64}, {'connected_gene': 'ENSG00000243384', 'score': 10.32}, {'connected_gene': 'FAM107A', 'score': 10.23}, {'connected_gene': 'ACOX2', 'score': 6.55}, {'connected_gene': 'ENSG00000272360', 'score': 4.7}, {'connected_gene': 'ABHD6', 'score': 4.56}, {'connected_gene': 'RPL27P9', 'score': 0.44}]
chr3	GH03I058404	58404534	58404683	0.8	[{'connected_gene': 'PXK', 'score': 12.17}, {'connected_gene': 'HTD2', 'score': 11.81}, {'connected_gene': 'RPP14', 'score': 11.81}, {'connected_gene': 'ENSG00000272182', 'score': 0.34}, {'connected_gene': 'ENSG00000275607', 'score': 0.31}]
chr3	GH03I058381	58381232	58381931	0.31	[{'connected_gene': 'PXK', 'score': 23.89}, {'connected_gene': 'HTD2', 'score': 11.49}, {'connected_gene': 'RPP14', 'score': 11.49}, {'connected_gene': 'ENSG00000275607', 'score': 0.77}, {'connected_gene': 'ENSG00000272182', 'score': 0.25}]
chr3	GH03I058172	58172882	58177432	1.63	[{'connected_gene': 'FLNB', 'score': 19.55}, {'connected_gene': 'DNASE1L3', 'score': 19.36}, {'connected_gene': 'RPP14', 'score': 17.23}, {'connected_gene': 'HTD2', 'score': 10.98}, {'connected_gene': 'FLNB-AS1', 'score': 10.77}, {'connected_gene': 'ABHD6', 'score': 10.72}, {'connected_gene': 'KCTD6', 'score': 1.38}, {'connected_gene': 'LOC105377650', 'score': 0.77}, {'connected_gene': 'ENSG00000283148', 'score': 0.77}]
chr3	GH03I058462	58462835	58464443	1.11	[{'connected_gene': 'KCTD6', 'score': 24.33}, {'connected_gene': 'PDHB', 'score': 19.77}, {'connected_gene': 'RPP14', 'score': 17.81}, {'connected_gene': 'PXK', 'score': 14.95}, {'connected_gene': 'DENND6A', 'score': 14.26}, {'connected_gene': 'ACOX2', 'score': 11.4}, {'connected_gene': 'HTD2', 'score': 11.12}, {'connected_gene': 'ENSG00000243384', 'score': 10.55}, {'connected_gene': 'FAM107A', 'score': 10.5}, {'connected_gene': 'FLNB-AS1', 'score': 10.23}, {'connected_gene': 'ENSG00000272360', 'score': 0.31}]
chr3	GH03I058271	58271774	58273238	0.89	[{'connected_gene': 'DNASE1L3', 'score': 11.96}, {'connected_gene': 'ABHD6', 'score': 11.66}, {'connected_gene': 'HTD2', 'score': 11.03}, {'connected_gene': 'RPP14', 'score': 11.03}, {'connected_gene': 'FLNB-AS1', 'score': 10.67}, {'connected_gene': 'FLNB', 'score': 10.59}]
chr3	GH03I058187	58187354	58192507	1.15	[{'connected_gene': 'DNASE1L3', 'score': 24.18}, {'connected_gene': 'RPP14', 'score': 21.65}, {'connected_gene': 'ABHD6', 'score': 15.88}, {'connected_gene': 'HTD2', 'score': 11.86}, {'connected_gene': 'FLNB', 'score': 11.29}, {'connected_gene': 'FLNB-AS1', 'score': 4.5}, {'connected_gene': 'ENSG00000243384', 'score': 3.98}, {'connected_gene': 'ENSG00000283511', 'score': 0.44}]
chr3	GH03I058182	58182308	58182638	0.24	[{'connected_gene': 'DNASE1L3', 'score': 12.18}, {'connected_gene': 'HTD2', 'score': 11.46}, {'connected_gene': 'RPP14', 'score': 11.46}, {'connected_gene': 'PXK', 'score': 9.98}, {'connected_gene': 'FLNB-AS1', 'score': 9.1}, {'connected_gene': 'ENSG00000283511', 'score': 0.77}]
chr3	GH03I058282	58282553	58286044	0.31	[{'connected_gene': 'RPP14', 'score': 38.73}, {'connected_gene': 'ABHD6', 'score': 21.58}, {'connected_gene': 'FLNB', 'score': 14.9}, {'connected_gene': 'HTD2', 'score': 11.65}, {'connected_gene': 'DNASE1L3', 'score': 10.87}, {'connected_gene': 'FLNB-AS1', 'score': 10.42}, {'connected_gene': 'ENSG00000243384', 'score': 9.43}, {'connected_gene': 'FAM107A', 'score': 9.41}]
chr3	GH03I058469	58469934	58473315	1.73	[{'connected_gene': 'RPP14', 'score': 31.64}, {'connected_gene': 'PXK', 'score': 22.34}, {'connected_gene': 'PDHB', 'score': 19.19}, {'connected_gene': 'KCTD6', 'score': 14.29}, {'connected_gene': 'ACOX2', 'score': 11.41}, {'connected_gene': 'HTD2', 'score': 11.11}, {'connected_gene': 'FAM107A', 'score': 10.11}, {'connected_gene': 'ENSG00000243384', 'score': 9.91}, {'connected_gene': 'ENSG00000272182', 'score': 7.91}, {'connected_gene': 'ENSG00000272360', 'score': 0.37}]
chr3	GH03I058412	58412648	58413327	0.2	[{'connected_gene': 'RPP14', 'score': 33.66}, {'connected_gene': 'PXK', 'score': 25.28}, {'connected_gene': 'PDHB', 'score': 20.6}, {'connected_gene': 'HTD2', 'score': 12.43}, {'connected_gene': 'ACOX2', 'score': 10.58}, {'connected_gene': 'ABHD6', 'score': 10.53}, {'connected_gene': 'FLNB-AS1', 'score': 10.31}, {'connected_gene': 'FLNB', 'score': 10.29}, {'connected_gene': 'ENSG00000272182', 'score': 0.37}, {'connected_gene': 'ENSG00000275607', 'score': 0.29}]
chr3	GH03I058423	58423669	58426119	0.49	[{'connected_gene': 'RPP14', 'score': 32.43}, {'connected_gene': 'PXK', 'score': 23.9}, {'connected_gene': 'KCTD6', 'score': 11.56}, {'connected_gene': 'HTD2', 'score': 11.2}, {'connected_gene': 'ACOX2', 'score': 10.68}, {'connected_gene': 'FAM107A', 'score': 9.43}, {'connected_gene': 'ABHD6', 'score': 7.16}, {'connected_gene': 'ENSG00000272182', 'score': 0.77}, {'connected_gene': 'ENSG00000275607', 'score': 0.25}]
chr3	GH03I058389	58389938	58393023	0.38	[{'connected_gene': 'RPP14', 'score': 32.28}, {'connected_gene': 'PXK', 'score': 24.75}, {'connected_gene': 'HTD2', 'score': 11.09}, {'connected_gene': 'ACOX2', 'score': 10.3}, {'connected_gene': 'ENSG00000243384', 'score': 10.17}, {'connected_gene': 'FAM107A', 'score': 10.15}, {'connected_gene': 'FLNB-AS1', 'score': 10.12}, {'connected_gene': 'FLNB', 'score': 10.1}, {'connected_gene': 'PDHB', 'score': 7.07}, {'connected_gene': 'ABHD6', 'score': 6.27}, {'connected_gene': 'ENSG00000275607', 'score': 0.39}, {'connected_gene': 'ENSG00000272182', 'score': 0.28}]
chr3	GH03I058372	58372606	58376067	0.38	[{'connected_gene': 'RPP14', 'score': 31.98}, {'connected_gene': 'PXK', 'score': 25.35}, {'connected_gene': 'HTD2', 'score': 11.24}, {'connected_gene': 'ACOX2', 'score': 10.33}, {'connected_gene': 'FLNB-AS1', 'score': 9.55}, {'connected_gene': 'FLNB', 'score': 9.52}, {'connected_gene': 'ABHD6', 'score': 6.88}, {'connected_gene': 'ENSG00000275607', 'score': 0.44}, {'connected_gene': 'LOC105377106', 'score': 0.37}]
chr3	GH03I058419	58419557	58420932	1.05	[{'connected_gene': 'RPP14', 'score': 33.52}, {'connected_gene': 'PXK', 'score': 24.59}, {'connected_gene': 'HTD2', 'score': 11.34}, {'connected_gene': 'FLNB-AS1', 'score': 9.97}, {'connected_gene': 'FLNB', 'score': 9.95}, {'connected_gene': 'ABHD6', 'score': 7.43}, {'connected_gene': 'ENSG00000272182', 'score': 0.44}, {'connected_gene': 'ENSG00000275607', 'score': 0.26}]
chr3	GH03I058393	58393398	58401950	0.31	[{'connected_gene': 'RPP14', 'score': 33.05}, {'connected_gene': 'PXK', 'score': 25.64}, {'connected_gene': 'HTD2', 'score': 11.82}, {'connected_gene': 'FLNB-AS1', 'score': 10.16}, {'connected_gene': 'FLNB', 'score': 10.14}, {'connected_gene': 'PDHB', 'score': 9.86}, {'connected_gene': 'ABHD6', 'score': 7.28}, {'connected_gene': 'ENSG00000275607', 'score': 0.37}, {'connected_gene': 'ENSG00000272182', 'score': 0.29}]
chr3	GH03I058273	58273887	58275476	0.38	[{'connected_gene': 'RPP14', 'score': 42.74}, {'connected_gene': 'DNASE1L3', 'score': 11.96}, {'connected_gene': 'ABHD6', 'score': 11.66}, {'connected_gene': 'HTD2', 'score': 11.03}, {'connected_gene': 'FLNB-AS1', 'score': 10.67}, {'connected_gene': 'FLNB', 'score': 10.58}]
chr3	GH03I058338	58338517	58339991	0.2	[{'connected_gene': 'RPP14', 'score': 24.4}, {'connected_gene': 'HTD2', 'score': 11.1}, {'connected_gene': 'ABHD6', 'score': 10.18}, {'connected_gene': 'ACOX2', 'score': 9.61}, {'connected_gene': 'ENSG00000273493', 'score': 5.08}, {'connected_gene': 'PXK', 'score': 4.73}, {'connected_gene': 'FLNB', 'score': 4.4}, {'connected_gene': 'LOC105377106', 'score': 0.37}]
chr3	GH03I058251	58251278	58254837	0.6	[{'connected_gene': 'RPP14', 'score': 32.6}, {'connected_gene': 'HTD2', 'score': 11.21}, {'connected_gene': 'PXK', 'score': 9.23}, {'connected_gene': 'ABHD6', 'score': 0.37}]
chr3	GH03I058305	58305654	58308963	2.29	[{'connected_gene': 'RPP14', 'score': 591.47}, {'connected_gene': 'HTD2', 'score': 550.77}, {'connected_gene': 'DENND6A', 'score': 13.74}, {'connected_gene': 'ABHD6', 'score': 9.95}, {'connected_gene': 'PDHB', 'score': 5.59}, {'connected_gene': 'ENSG00000273493', 'score': 5.48}, {'connected_gene': 'PXK', 'score': 4.65}, {'connected_gene': 'PIR62243', 'score': 0.39}]
chr3	GH03I058232	58232594	58232806	0.8	[{'connected_gene': 'HTD2', 'score': 11.11}, {'connected_gene': 'RPP14', 'score': 11.11}, {'connected_gene': 'FLNB-AS1', 'score': 10.74}, {'connected_gene': 'FLNB', 'score': 10.6}, {'connected_gene': 'ACOX2', 'score': 9.37}, {'connected_gene': 'DNASE1L3', 'score': 8.12}, {'connected_gene': 'ABHD6', 'score': 4.21}]
chr3	GH03I058196	58196075	58197468	0.77	[{'connected_gene': 'FLNB-AS1', 'score': 15.64}, {'connected_gene': 'ABHD6', 'score': 11.27}, {'connected_gene': 'FLNB', 'score': 11.1}, {'connected_gene': 'HTD2', 'score': 10.89}, {'connected_gene': 'RPP14', 'score': 10.89}, {'connected_gene': 'DNASE1L3', 'score': 10.66}, {'connected_gene': 'ENSG00000283511', 'score': 0.37}]
chr3	GH03I058316	58316913	58319739	0.31	[{'connected_gene': 'PIR62243', 'score': 550.77}, {'connected_gene': 'ACOX2', 'score': 10.62}, {'connected_gene': 'ABHD6', 'score': 10.47}, {'connected_gene': 'ENSG00000243384', 'score': 10.05}, {'connected_gene': 'FAM107A', 'score': 10.04}, {'connected_gene': 'PXK', 'score': 9.55}, {'connected_gene': 'ENSG00000272182', 'score': 8.2}, {'connected_gene': 'RPP14', 'score': 6.73}, {'connected_gene': 'PDHB', 'score': 6.09}, {'connected_gene': 'HTD2', 'score': 0.39}]
chr3	GH03I058427	58427770	58428806	0.38	[{'connected_gene': 'ENSG00000272182', 'score': 550.77}, {'connected_gene': 'PXK', 'score': 23.29}, {'connected_gene': 'RPP14', 'score': 17.71}, {'connected_gene': 'KCTD6', 'score': 11.57}, {'connected_gene': 'HTD2', 'score': 11.2}, {'connected_gene': 'ACOX2', 'score': 10.28}, {'connected_gene': 'FAM107A', 'score': 9.05}, {'connected_gene': 'ABHD6', 'score': 7.41}, {'connected_gene': 'PDHB', 'score': 0.44}]
chr3	GH03I058428	58428971	58429832	0.38	[{'connected_gene': 'ENSG00000272182', 'score': 550.77}, {'connected_gene': 'RPP14', 'score': 32.44}, {'connected_gene': 'PXK', 'score': 23.69}, {'connected_gene': 'KCTD6', 'score': 11.57}, {'connected_gene': 'HTD2', 'score': 11.2}, {'connected_gene': 'ACOX2', 'score': 10.28}, {'connected_gene': 'FAM107A', 'score': 9.05}, {'connected_gene': 'ABHD6', 'score': 5.46}, {'connected_gene': 'PDHB', 'score': 0.77}]
chr3	GH03I058378	58378836	58381027	0.49	[{'connected_gene': 'ENSG00000275607', 'score': 550.77}, {'connected_gene': 'RPP14', 'score': 32.69}, {'connected_gene': 'PXK', 'score': 25.2}, {'connected_gene': 'HTD2', 'score': 11.5}, {'connected_gene': 'ACOX2', 'score': 10.31}, {'connected_gene': 'ABHD6', 'score': 7.92}, {'connected_gene': 'PDHB', 'score': 4.23}, {'connected_gene': 'ENSG00000272182', 'score': 0.25}]
chr3	GH03I058177	58177600	58178495	1.78	[{'connected_gene': 'ENSG00000283511', 'score': 550.77}, {'connected_gene': 'ENSG00000283148', 'score': 550.77}, {'connected_gene': 'RPP14', 'score': 21.97}, {'connected_gene': 'DNASE1L3', 'score': 21.41}, {'connected_gene': 'HTD2', 'score': 11.46}, {'connected_gene': 'FLNB', 'score': 11.45}, {'connected_gene': 'ABHD6', 'score': 10.73}, {'connected_gene': 'PXK', 'score': 9.99}, {'connected_gene': 'LOC105377650', 'score': 0.44}]