PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000369162	[[100956069, 100957409], [100957807, 100957983], [100960584, 100960794], [100964055, 100964203], [100965866, 100966018], [100988038, 100988263], [101037509, 101037644], [101037823, 101037935], [101049685, 101049811], [101053443, 101053576], [101054615, 101054736], [101054826, 101054964], [101073067, 101073210], [101075465, 101075586], [101075717, 101075863], [101076890, 101077057], [101079003, 101079089], [101086476, 101086697], [101090456, 101090625], [101091906, 101092005], [101094490, 101094645], [101095101, 101095327], [101098413, 101098590], [101099435, 101099522], [101100600, 101100765], [101103574, 101103694], [101109681, 101109906], [101110220, 101110412], [101127493, 101127628], [101163337, 101163409], [101165950, 101166127], [101173414, 101173579], [101214440, 101214581], [101215020, 101215221], [101246588, 101246714], [101247306, 101247448], [101248175, 101248380], [101253635, 101253756], [101296023, 101296583], [101311939, 101312090], [101315783, 101315914], [101328936, 101329240]]	[[100957261, 100957409], [100957807, 100957983], [100960584, 100960794], [100964055, 100964203], [100965866, 100966018], [100988038, 100988263], [101037509, 101037644], [101037823, 101037935], [101049685, 101049811], [101053443, 101053576], [101054615, 101054736], [101054826, 101054964], [101073067, 101073210], [101075465, 101075586], [101075717, 101075863], [101076890, 101077057], [101079003, 101079089], [101086476, 101086697], [101090456, 101090625], [101091906, 101092005], [101094490, 101094645], [101095101, 101095327], [101098413, 101098590], [101099435, 101099522], [101100600, 101100765], [101103574, 101103694], [101109681, 101109906], [101110220, 101110412], [101127493, 101127628], [101163337, 101163409], [101165950, 101166127], [101173414, 101173579], [101214440, 101214581], [101215020, 101215221], [101246588, 101246714], [101247306, 101247448], [101248175, 101248380], [101253635, 101253756], [101296023, 101296583], [101311939, 101312090], [101315783, 101315873]]
ENST00000324696	[[101095163, 101095327], [101098413, 101098590], [101099435, 101099522], [101100600, 101100765], [101103574, 101103694], [101109681, 101109906], [101110220, 101110412], [101127493, 101127628], [101163337, 101163409], [101165950, 101166127], [101173414, 101173579], [101214440, 101214581], [101215020, 101215221], [101246588, 101246714], [101247306, 101247448], [101248175, 101248380], [101253635, 101253756], [101296023, 101296583], [101315783, 101315914], [101328936, 101329248]]	[[101296526, 101296583], [101315783, 101315873]]
ENST00000522650	[[101163005, 101163409], [101165950, 101166127], [101173414, 101173579], [101214440, 101214581], [101215020, 101215221], [101246588, 101246714], [101247306, 101247448], [101248175, 101248380], [101253635, 101253756], [101296023, 101296583], [101311939, 101312090], [101315783, 101315914], [101328936, 101329240]]	[[101163292, 101163409], [101165950, 101166127], [101173414, 101173579], [101214440, 101214581], [101215020, 101215221], [101246588, 101246714], [101247306, 101247448], [101248175, 101248380], [101253635, 101253756], [101296023, 101296583], [101311939, 101312090], [101315783, 101315873]]
ENST00000468245	[[101295879, 101296583], [101311939, 101312090], [101315783, 101315914], [101328936, 101329177]]	None
ENST00000324723	[[101296295, 101296583], [101311939, 101312090], [101315783, 101315908], [101328936, 101329224]]	[[101296295, 101296583], [101311939, 101312090], [101315783, 101315873]]
ENST00000369143	[[101304178, 101307078], [101311939, 101312090], [101315783, 101315914], [101328936, 101329187]]	[[101306983, 101307078], [101311939, 101312090], [101315783, 101315873]]
ENST00000518006	[[100957093, 100957409], [100957807, 100958184]]	None
NM_006828	[[100956069, 100957409], [100957807, 100957983], [100960584, 100960794], [100964055, 100964203], [100965866, 100966018], [100988038, 100988263], [101037509, 101037644], [101037823, 101037935], [101049685, 101049811], [101053443, 101053576], [101054615, 101054736], [101054826, 101054964], [101073067, 101073210], [101075465, 101075586], [101075717, 101075863], [101076890, 101077057], [101079003, 101079089], [101086476, 101086697], [101090456, 101090625], [101091906, 101092005], [101094490, 101094645], [101095101, 101095327], [101098413, 101098590], [101099435, 101099522], [101100600, 101100765], [101103574, 101103694], [101109681, 101109906], [101110220, 101110412], [101127493, 101127628], [101163337, 101163409], [101165950, 101166127], [101173414, 101173579], [101214440, 101214581], [101215020, 101215221], [101246588, 101246714], [101247306, 101247448], [101248175, 101248380], [101253635, 101253756], [101296023, 101296583], [101311939, 101312090], [101315783, 101315914], [101328936, 101329248]]	[[100957261, 100957409], [100957807, 100957983], [100960584, 100960794], [100964055, 100964203], [100965866, 100966018], [100988038, 100988263], [101037509, 101037644], [101037823, 101037935], [101049685, 101049811], [101053443, 101053576], [101054615, 101054736], [101054826, 101054964], [101073067, 101073210], [101075465, 101075586], [101075717, 101075863], [101076890, 101077057], [101079003, 101079089], [101086476, 101086697], [101090456, 101090625], [101091906, 101092005], [101094490, 101094645], [101095101, 101095327], [101098413, 101098590], [101099435, 101099522], [101100600, 101100765], [101103574, 101103694], [101109681, 101109906], [101110220, 101110412], [101127493, 101127628], [101163337, 101163409], [101165950, 101166127], [101173414, 101173579], [101214440, 101214581], [101215020, 101215221], [101246588, 101246714], [101247306, 101247448], [101248175, 101248380], [101253635, 101253756], [101296023, 101296583], [101311939, 101312090], [101315783, 101315873]]
NM_001284271	[[101163005, 101163409], [101165950, 101166127], [101173414, 101173579], [101214440, 101214581], [101215020, 101215221], [101246588, 101246714], [101247306, 101247448], [101248175, 101248380], [101253635, 101253756], [101296023, 101296583], [101311939, 101312090], [101315783, 101315914], [101328936, 101329248]]	[[101163292, 101163409], [101165950, 101166127], [101173414, 101173579], [101214440, 101214581], [101215020, 101215221], [101246588, 101246714], [101247306, 101247448], [101248175, 101248380], [101253635, 101253756], [101296023, 101296583], [101311939, 101312090], [101315783, 101315873]]
NM_022091	[[101304178, 101307078], [101311939, 101312090], [101315783, 101315914], [101328936, 101329248]]	[[101306983, 101307078], [101311939, 101312090], [101315783, 101315873]]

Promoter

Chrom	Start	End	Description
chr6	101329144	101329155	CAGE_peak_3_at_ASCC3_5end
chr6	101329157	101329190	CAGE_peak_2_at_ASCC3_5end
chr6	101329191	101329272	CAGE_peak_1_at_ASCC3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I100460	100460748	100466158	1.09	[{'connected_gene': 'SIM1', 'score': 550.77}, {'connected_gene': 'ASCC3', 'score': 11.37}, {'connected_gene': 'LOC102724406', 'score': 11.18}, {'connected_gene': 'RPS3P5', 'score': 4.63}, {'connected_gene': 'GC06P100411', 'score': 0.23}]
chr6	GH06I100525	100525935	100526717	0.6	[{'connected_gene': 'LOC153893', 'score': 0.77}, {'connected_gene': 'GC06P100503', 'score': 0.34}, {'connected_gene': 'ASCC3', 'score': 0.05}]
chr6	GH06I100948	100948765	100948834	0.87	[{'connected_gene': 'ASCC3', 'score': 17.26}, {'connected_gene': 'LOC728098', 'score': 0.22}, {'connected_gene': 'LOC102724422', 'score': 0.2}, {'connected_gene': 'GC06P101131', 'score': 0.09}]
chr6	GH06I100891	100891892	100893378	0.46	[{'connected_gene': 'ASCC3', 'score': 13.32}, {'connected_gene': 'LOC728098', 'score': 0.77}, {'connected_gene': 'LOC102724422', 'score': 0.39}, {'connected_gene': 'GC06P101131', 'score': 0.07}]
chr6	GH06I100662	100662810	100664346	0.54	[{'connected_gene': 'ASCC3', 'score': 13.88}, {'connected_gene': 'GRIK2', 'score': 5.78}, {'connected_gene': 'GC06M100662', 'score': 0.25}, {'connected_gene': 'GC06P100560', 'score': 0.15}]
chr6	GH06I101401	101401712	101402200	0.74	[{'connected_gene': 'ASCC3', 'score': 10.45}, {'connected_gene': 'GRIK2', 'score': 0.44}, {'connected_gene': 'PIR46414', 'score': 0.31}]
chr6	GH06I101760	101760945	101761764	0.86	[{'connected_gene': 'ASCC3', 'score': 4.61}, {'connected_gene': 'GC06M101784', 'score': 0.34}, {'connected_gene': 'GC06P101550', 'score': 0.08}, {'connected_gene': 'GRIK2', 'score': 0.05}]
chr6	GH06I101206	101206258	101208906	0.43	[{'connected_gene': 'ASCC3', 'score': 4.31}, {'connected_gene': 'PIR53412', 'score': 0.21}, {'connected_gene': 'GRIK2', 'score': 0.09}]
chr6	GH06I101405	101402225	101402318	0.43	[{'connected_gene': 'ASCC3', 'score': 10.45}, {'connected_gene': 'GRIK2', 'score': 0.44}, {'connected_gene': 'PIR46414', 'score': 0.31}]
chr6	GH06I100877	100877757	100882297	2.04	[{'connected_gene': 'ASCC3', 'score': 580.89}, {'connected_gene': 'LOC102724422', 'score': 550.77}, {'connected_gene': 'GC06P100882', 'score': 550.77}, {'connected_gene': 'GRIK2', 'score': 10.94}, {'connected_gene': 'GC06M100662', 'score': 0.1}]
chr6	GH06I100466	100466742	100468110	0.46	[{'connected_gene': 'ASCC3', 'score': 16.36}, {'connected_gene': 'LOC102724406', 'score': 10.52}, {'connected_gene': 'RPS3P5', 'score': 4.63}, {'connected_gene': 'SIM1', 'score': 0.77}, {'connected_gene': 'GC06P100503', 'score': 0.28}, {'connected_gene': 'GC06P100411', 'score': 0.22}]
chr6	GH06I100453	100453333	100459683	1.45	[{'connected_gene': 'ASCC3', 'score': 18.84}, {'connected_gene': 'LOC102724406', 'score': 11.49}, {'connected_gene': 'RPS3P5', 'score': 4.63}, {'connected_gene': 'SIM1', 'score': 2.25}, {'connected_gene': 'GC06P100411', 'score': 0.26}]
chr6	GH06I100632	100632405	100634043	0.77	[{'connected_gene': 'ASCC3', 'score': 13.78}, {'connected_gene': 'GC06P100560', 'score': 0.19}, {'connected_gene': 'GC06M100662', 'score': 0.18}]
chr6	GH06I100617	100617538	100618854	0.66	[{'connected_gene': 'ASCC3', 'score': 11.68}, {'connected_gene': 'GC06P100560', 'score': 0.22}, {'connected_gene': 'GC06M100662', 'score': 0.16}]
chr6	GH06I100619	100619804	100620853	0.2	[{'connected_gene': 'ASCC3', 'score': 12.37}, {'connected_gene': 'GC06P100560', 'score': 0.22}, {'connected_gene': 'GC06M100662', 'score': 0.16}]
chr6	GH06I100720	100720201	100720684	0.95	[{'connected_gene': 'ASCC3', 'score': 12.88}, {'connected_gene': 'GC06M100662', 'score': 0.44}]
chr6	GH06I100592	100592984	100593264	1.11	[{'connected_gene': 'LOC102724422', 'score': 11.42}, {'connected_gene': 'GC06P100560', 'score': 0.29}, {'connected_gene': 'GC06M100662', 'score': 0.13}, {'connected_gene': 'ASCC3', 'score': 0.06}]
chr6	GH06I100446	100446358	100449013	0.54	[{'connected_gene': 'LOC102724406', 'score': 11.85}, {'connected_gene': 'ASCC3', 'score': 3.99}, {'connected_gene': 'SIM1', 'score': 0.37}, {'connected_gene': 'GC06P100411', 'score': 0.28}]
chr6	GH06I100514	100514645	100515146	0.4	[{'connected_gene': 'GC06P100503', 'score': 0.39}, {'connected_gene': 'LOC153893', 'score': 0.37}, {'connected_gene': 'ASCC3', 'score': 0.05}]
chr6	GH06I100512	100512605	100512754	0.2	[{'connected_gene': 'GC06P100503', 'score': 0.44}, {'connected_gene': 'LOC153893', 'score': 0.37}, {'connected_gene': 'ASCC3', 'score': 0.05}]
chr6	GH06I100504	100504434	100505961	0.79	[{'connected_gene': 'GC06P100503', 'score': 550.77}, {'connected_gene': 'ASCC3', 'score': 12.07}, {'connected_gene': 'LOC102724406', 'score': 10.21}, {'connected_gene': 'LOC153893', 'score': 0.31}]
chr6	GH06I100560	100560245	100561041	0.78	[{'connected_gene': 'GC06P100560', 'score': 550.77}, {'connected_gene': 'ASCC3', 'score': 5.2}, {'connected_gene': 'GC06M100662', 'score': 0.1}]
chr6	GH06I100612	100612273	100612540	0.4	[{'connected_gene': 'GC06P100560', 'score': 0.23}, {'connected_gene': 'GC06M100662', 'score': 0.15}, {'connected_gene': 'ASCC3', 'score': 0.06}]