PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000229214	[[75890683, 75893731], [75895502, 75895596], [75895702, 75895780], [75897683, 75897854], [75898977, 75899034], [75900095, 75900179], [75900263, 75900389], [75900561, 75900696], [75902053, 75902226], [75905292, 75905401]]	[[75893588, 75893731], [75895502, 75895596], [75895702, 75895780], [75897683, 75897854], [75898977, 75899034], [75900095, 75900179], [75900263, 75900389], [75900561, 75900696], [75902053, 75902226], [75905292, 75905377]]
ENST00000438169	[[75893588, 75893731], [75895502, 75895596], [75895702, 75895780], [75898977, 75899034], [75900095, 75900179], [75900263, 75900389], [75900561, 75900696], [75902053, 75902226], [75905292, 75905377]]	[[75893588, 75893731], [75895502, 75895596], [75895702, 75895780], [75898977, 75899034], [75900095, 75900179], [75900263, 75900389], [75900561, 75900696], [75902053, 75902226], [75905292, 75905377]]
ENST00000551070	[[75893609, 75893731], [75895502, 75895596], [75895702, 75895780], [75897683, 75898062]]	None
ENST00000550023	[[75899943, 75900389], [75900561, 75900696], [75902053, 75902226], [75905292, 75905393]]	None
ENST00000550898	[[75900299, 75900696], [75902053, 75902226], [75905292, 75905416]]	None
NM_007043	[[75891418, 75893731], [75895502, 75895596], [75895702, 75895780], [75897683, 75897854], [75898977, 75899034], [75900095, 75900179], [75900263, 75900389], [75900561, 75900696], [75902053, 75902226], [75905292, 75905418]]	[[75893588, 75893731], [75895502, 75895596], [75895702, 75895780], [75897683, 75897854], [75898977, 75899034], [75900095, 75900179], [75900263, 75900389], [75900561, 75900696], [75902053, 75902226], [75905292, 75905377]]

Promoter

Chrom	Start	End	Description
chr12	75905374	75905420	CAGE_peak_1_at_KRR1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I075329	75329521	75330930	2.06	[{'connected_gene': 'CAPS2', 'score': 561.17}, {'connected_gene': 'KRR1', 'score': 35.65}, {'connected_gene': 'LOC100652897', 'score': 18.29}, {'connected_gene': 'GLIPR1L2', 'score': 11.17}, {'connected_gene': 'ENSG00000273987', 'score': 0.77}, {'connected_gene': 'LOC100419702', 'score': 0.34}]
chr12	GH12I076346	76346519	76349300	2.05	[{'connected_gene': 'BBS10', 'score': 556.6}, {'connected_gene': 'KRR1', 'score': 16.32}, {'connected_gene': 'RN7SKP172', 'score': 0.29}]
chr12	GH12I076124	76124401	76124600	0.57	[{'connected_gene': 'NAP1L1', 'score': 11.87}, {'connected_gene': 'KRR1', 'score': 11.09}, {'connected_gene': 'ENSG00000257497', 'score': 10.03}, {'connected_gene': 'ENSG00000258304', 'score': 0.44}, {'connected_gene': 'LOC641695', 'score': 0.39}]
chr12	GH12I075456	75456761	75458338	0.94	[{'connected_gene': 'GLIPR1L2', 'score': 62.94}, {'connected_gene': 'CAPS2', 'score': 14.23}, {'connected_gene': 'BBS10', 'score': 13.6}, {'connected_gene': 'GLIPR1', 'score': 12.17}, {'connected_gene': 'KRR1', 'score': 10.65}]
chr12	GH12I075388	75388512	75392449	2	[{'connected_gene': 'GLIPR1L2', 'score': 629.73}, {'connected_gene': 'CAPS2', 'score': 550.77}, {'connected_gene': 'KRR1', 'score': 17.65}, {'connected_gene': 'GLIPR1', 'score': 11.27}, {'connected_gene': 'GLIPR1L1', 'score': 0.22}]
chr12	GH12I075505	75505619	75506510	0.74	[{'connected_gene': 'GLIPR1L2', 'score': 63.56}, {'connected_gene': 'GLIPR1L1', 'score': 11.89}, {'connected_gene': 'GLIPR1', 'score': 11.23}, {'connected_gene': 'CAPS2', 'score': 10.96}, {'connected_gene': 'PHLDA1', 'score': 10.28}, {'connected_gene': 'KCNC2', 'score': 8.78}, {'connected_gene': 'KRR1', 'score': 0.44}, {'connected_gene': 'ENSG00000257497', 'score': 0.37}]
chr12	GH12I075638	75638649	75643122	1.27	[{'connected_gene': 'GLIPR1L2', 'score': 33.67}, {'connected_gene': 'ENSG00000251893', 'score': 11.82}, {'connected_gene': 'PHLDA1', 'score': 10.63}, {'connected_gene': 'KRR1', 'score': 6.63}, {'connected_gene': 'GC12P075601', 'score': 0.26}, {'connected_gene': 'RPL10P13', 'score': 0.25}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075578	75578099	75582913	0.8	[{'connected_gene': 'GLIPR1L2', 'score': 29.18}, {'connected_gene': 'ENSG00000251893', 'score': 10.93}, {'connected_gene': 'PHLDA1', 'score': 9.73}, {'connected_gene': 'KRR1', 'score': 8.5}, {'connected_gene': 'GLIPR1', 'score': 4.98}, {'connected_gene': 'PGDP2', 'score': 0.37}, {'connected_gene': 'GC12P075544', 'score': 0.28}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075628	75628948	75629780	0.91	[{'connected_gene': 'GLIPR1L2', 'score': 25.72}, {'connected_gene': 'ENSG00000251893', 'score': 10.39}, {'connected_gene': 'KRR1', 'score': 6.99}, {'connected_gene': 'GC12P075601', 'score': 0.31}, {'connected_gene': 'RPL10P13', 'score': 0.22}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075496	75496659	75497951	0.2	[{'connected_gene': 'GLIPR1L2', 'score': 73.01}, {'connected_gene': 'KRR1', 'score': 34.87}, {'connected_gene': 'GLIPR1L1', 'score': 11.92}, {'connected_gene': 'ENSG00000257497', 'score': 11.89}, {'connected_gene': 'CAPS2', 'score': 11.33}, {'connected_gene': 'PHLDA1', 'score': 10.08}, {'connected_gene': 'GLIPR1', 'score': 0.37}]
chr12	GH12I075485	75485594	75488196	0.43	[{'connected_gene': 'GLIPR1L2', 'score': 69.89}, {'connected_gene': 'KRR1', 'score': 18.55}, {'connected_gene': 'ENSG00000257497', 'score': 16.78}, {'connected_gene': 'GLIPR1L1', 'score': 12.23}, {'connected_gene': 'CAPS2', 'score': 11.45}, {'connected_gene': 'GLIPR1', 'score': 0.44}]
chr12	GH12I075622	75622658	75624898	1.33	[{'connected_gene': 'GLIPR1L2', 'score': 27.8}, {'connected_gene': 'KRR1', 'score': 22.12}, {'connected_gene': 'ENSG00000251893', 'score': 10.37}, {'connected_gene': 'ENSG00000257497', 'score': 7.12}, {'connected_gene': 'GLIPR1', 'score': 4.68}, {'connected_gene': 'GC12P075601', 'score': 0.34}, {'connected_gene': 'RPL10P13', 'score': 0.2}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075558	75558401	75558550	0.76	[{'connected_gene': 'GLIPR1L2', 'score': 29.38}, {'connected_gene': 'KRR1', 'score': 23.65}, {'connected_gene': 'GC12P075544', 'score': 0.39}, {'connected_gene': 'PGDP2', 'score': 0.26}]
chr12	GH12I075683	75683273	75685946	1.03	[{'connected_gene': 'KRR1', 'score': 18.34}, {'connected_gene': 'RPL21P98', 'score': 10.24}, {'connected_gene': 'RPL10P13', 'score': 0.77}, {'connected_gene': 'LOC105369844', 'score': 0.39}, {'connected_gene': 'GC12P075601', 'score': 0.18}, {'connected_gene': 'ENSG00000258077', 'score': 0.06}]
chr12	GH12I076302	76302346	76304739	0.92	[{'connected_gene': 'KRR1', 'score': 18.27}, {'connected_gene': 'RPL21P98', 'score': 10.27}, {'connected_gene': 'LINC02407', 'score': 5.9}, {'connected_gene': 'CSRP2', 'score': 5.03}, {'connected_gene': 'GC12M076305', 'score': 0.77}]
chr12	GH12I075670	75670117	75670797	0.2	[{'connected_gene': 'KRR1', 'score': 5.73}, {'connected_gene': 'RPL10P13', 'score': 0.37}, {'connected_gene': 'LOC105369844', 'score': 0.34}, {'connected_gene': 'GC12P075601', 'score': 0.19}, {'connected_gene': 'ENSG00000258077', 'score': 0.06}]
chr12	GH12I075492	75492146	75495963	0.2	[{'connected_gene': 'KRR1', 'score': 35.82}, {'connected_gene': 'ENSG00000257497', 'score': 24.03}, {'connected_gene': 'GLIPR1L1', 'score': 11.58}, {'connected_gene': 'CAPS2', 'score': 11.15}, {'connected_gene': 'GLIPR1L2', 'score': 11.15}, {'connected_gene': 'GLIPR1', 'score': 0.39}]
chr12	GH12I075507	75507127	75507635	0.66	[{'connected_gene': 'KRR1', 'score': 37.88}, {'connected_gene': 'GLIPR1L1', 'score': 11.89}, {'connected_gene': 'GLIPR1', 'score': 11.23}, {'connected_gene': 'CAPS2', 'score': 10.96}, {'connected_gene': 'GLIPR1L2', 'score': 10.96}, {'connected_gene': 'PHLDA1', 'score': 10.28}, {'connected_gene': 'KCNC2', 'score': 8.78}, {'connected_gene': 'ENSG00000257497', 'score': 0.37}]
chr12	GH12I075655	75655392	75662629	1.43	[{'connected_gene': 'KRR1', 'score': 13.66}, {'connected_gene': 'ENSG00000251893', 'score': 11.41}, {'connected_gene': 'ENSG00000257497', 'score': 4.77}, {'connected_gene': 'PHLDA1', 'score': 3.47}, {'connected_gene': 'RPL10P13', 'score': 0.29}, {'connected_gene': 'GC12P075601', 'score': 0.22}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075508	75508283	75513161	2.54	[{'connected_gene': 'KRR1', 'score': 622.93}, {'connected_gene': 'ENSG00000257497', 'score': 23.36}, {'connected_gene': 'GLIPR1L2', 'score': 16.04}, {'connected_gene': 'GLIPR1L1', 'score': 11.89}, {'connected_gene': 'GLIPR1', 'score': 11.21}, {'connected_gene': 'CAPS2', 'score': 10.96}, {'connected_gene': 'PHLDA1', 'score': 10.28}, {'connected_gene': 'KCNC2', 'score': 8.78}]
chr12	GH12I075501	75501700	75503665	0.2	[{'connected_gene': 'KRR1', 'score': 37.99}, {'connected_gene': 'GLIPR1L2', 'score': 27.51}, {'connected_gene': 'ENSG00000257497', 'score': 23.64}, {'connected_gene': 'GLIPR1L1', 'score': 11.93}, {'connected_gene': 'GLIPR1', 'score': 11.55}, {'connected_gene': 'CAPS2', 'score': 11.49}, {'connected_gene': 'PHLDA1', 'score': 10.08}]
chr12	GH12I075572	75571584	75572188	0.2	[{'connected_gene': 'KRR1', 'score': 23.28}, {'connected_gene': 'GLIPR1L2', 'score': 10.05}, {'connected_gene': 'PGDP2', 'score': 0.31}, {'connected_gene': 'GC12P075544', 'score': 0.31}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075493	75492037	75492106	0.42	[{'connected_gene': 'KRR1', 'score': 1.64}, {'connected_gene': 'ENSG00000257497', 'score': 0.77}, {'connected_gene': 'GLIPR1', 'score': 0.39}]
chr12	GH12I076199	76199921	76200070	0.66	[{'connected_gene': 'KRR1', 'score': 10.45}, {'connected_gene': 'LINC02407', 'score': 0.22}, {'connected_gene': 'GC12P076140', 'score': 0.21}]
chr12	GH12I075763	75763653	75768671	1.1	[{'connected_gene': 'KRR1', 'score': 13.62}, {'connected_gene': 'ENSG00000251893', 'score': 10.66}, {'connected_gene': 'LOC105369846', 'score': 0.39}, {'connected_gene': 'ENSG00000258088', 'score': 0.2}, {'connected_gene': 'ENSG00000258077', 'score': 0.08}]
chr12	GH12I075477	75477993	75485530	2.32	[{'connected_gene': 'GLIPR1', 'score': 555.76}, {'connected_gene': 'GLIPR1L2', 'score': 73.48}, {'connected_gene': 'KRR1', 'score': 34.25}, {'connected_gene': 'GLIPR1L1', 'score': 11.77}, {'connected_gene': 'CAPS2', 'score': 11.46}, {'connected_gene': 'ENSG00000257497', 'score': 10.17}]
chr12	GH12I075696	75696041	75696190	0.4	[{'connected_gene': 'LOC105369844', 'score': 550.77}, {'connected_gene': 'KRR1', 'score': 5.25}, {'connected_gene': 'ENSG00000258088', 'score': 0.77}, {'connected_gene': 'ENSG00000258077', 'score': 0.06}]
chr12	GH12I076144	76144201	76144400	0.78	[{'connected_gene': 'LOC100652897', 'score': 26.02}, {'connected_gene': 'KRR1', 'score': 16.53}, {'connected_gene': 'GLIPR1L1', 'score': 14.16}, {'connected_gene': 'CAPS2', 'score': 12.37}, {'connected_gene': 'ZDHHC17', 'score': 11.88}, {'connected_gene': 'BBS10', 'score': 11.21}, {'connected_gene': 'RPL21P98', 'score': 10.26}, {'connected_gene': 'GC12P076140', 'score': 0.77}, {'connected_gene': 'LINC02407', 'score': 0.13}]
chr12	GH12I075803	75803748	75804117	0.24	[{'connected_gene': 'ENSG00000251893', 'score': 10.17}, {'connected_gene': 'PHLDA1', 'score': 5.37}, {'connected_gene': 'KRR1', 'score': 1.49}, {'connected_gene': 'LOC105369846', 'score': 0.34}, {'connected_gene': 'ENSG00000258091', 'score': 0.13}, {'connected_gene': 'ENSG00000258077', 'score': 0.09}]
chr12	GH12I075488	75488632	75490641	1	[{'connected_gene': 'ENSG00000257497', 'score': 550.77}, {'connected_gene': 'GLIPR1L2', 'score': 61.53}, {'connected_gene': 'KRR1', 'score': 23.25}, {'connected_gene': 'GLIPR1', 'score': 0.44}]
chr12	GH12I075704	75704028	75717086	1.39	[{'connected_gene': 'ENSG00000251893', 'score': 12.23}, {'connected_gene': 'KRR1', 'score': 5.07}, {'connected_gene': 'ENSG00000258088', 'score': 0.39}, {'connected_gene': 'LOC105369846', 'score': 0.19}, {'connected_gene': 'ENSG00000258077', 'score': 0.06}]
chr12	GH12I075559	75559696	75560970	0.63	[{'connected_gene': 'ENSG00000257497', 'score': 11.26}, {'connected_gene': 'KRR1', 'score': 5.62}, {'connected_gene': 'GC12P075544', 'score': 0.37}, {'connected_gene': 'PGDP2', 'score': 0.28}]