PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000264808	[[121613069, 121616430], [121631463, 121631568], [121675707, 121675793], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121737986, 121738079], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121844004]]	[[121616265, 121616430], [121631463, 121631568], [121675707, 121675793], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121737986, 121738079], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121843763]]
ENST00000428209	[[121615977, 121616430], [121631463, 121631568], [121675707, 121675793], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121844013]]	[[121616265, 121616430], [121631463, 121631568], [121675707, 121675793], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121843763]]
ENST00000515109	[[121615977, 121616430], [121631463, 121631568], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121844020]]	[[121631506, 121631568], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121843763]]
ENST00000505484	[[121616265, 121616430], [121631463, 121631568], [121652772, 121652945], [121675707, 121675793], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121738079], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121843836]]	None
ENST00000506065	[[121616312, 121616430], [121631463, 121631568], [121675707, 121675793], [121683534, 121683921]]	None
ENST00000512845	[[121737217, 121737729], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121843850]]	None
ENST00000394435	[[121758499, 121760429], [121774572, 121774695], [121828628, 121828712], [121843670, 121844025]]	[[121760393, 121760429], [121774572, 121774695], [121828628, 121828712], [121843670, 121843763]]
ENST00000513741	[[121606073, 121606180], [121631463, 121631566]]	None
ENST00000503661	[[121706178, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121733705, 121734161]]	None
ENST00000502409	[[121706185, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121733705, 121733969], [121737607, 121737729], [121737986, 121738079], [121739507, 121739682], [121742325, 121742331]]	[[121733928, 121733969], [121737607, 121737729], [121737986, 121738079], [121739507, 121739682], [121742325, 121742331]]
ENST00000507611	[[121739325, 121739682], [121742325, 121742503]]	None
ENST00000505033	[[121806659, 121806940], [121828628, 121828712], [121843670, 121843881]]	None
NM_018699	[[121613067, 121616430], [121631463, 121631568], [121675707, 121675793], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121737986, 121738079], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121844021]]	[[121616265, 121616430], [121631463, 121631568], [121675707, 121675793], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121737986, 121738079], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121843763]]
NM_001300823	[[121613067, 121616430], [121631463, 121631568], [121675707, 121675793], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121844021]]	[[121616265, 121616430], [121631463, 121631568], [121675707, 121675793], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121843763]]
NM_001300824	[[121613067, 121616430], [121631463, 121631568], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121844021]]	[[121631506, 121631568], [121698342, 121698436], [121702297, 121702458], [121706152, 121706246], [121719421, 121719579], [121720815, 121720900], [121732524, 121732604], [121737607, 121737729], [121739507, 121739682], [121742325, 121742500], [121774572, 121774695], [121828628, 121828712], [121843670, 121843763]]

Promoter

Chrom	Start	End	Description
chr4	121843402	121843416	CAGE_peak_4_at_PRDM5_5end
chr4	121843844	121843904	CAGE_peak_1_at_PRDM5_5end
chr4	121843985	121844024	CAGE_peak_2_at_PRDM5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I120901	120901324	120902708	0.31	[{'connected_gene': 'PRDM5', 'score': 17.41}, {'connected_gene': 'NDNF', 'score': 4.79}, {'connected_gene': 'SETP12', 'score': 0.77}, {'connected_gene': 'GC04P120921', 'score': 0.37}]
chr4	GH04I120815	120815786	120816707	0.31	[{'connected_gene': 'PRDM5', 'score': 6.56}, {'connected_gene': 'RNU6-550P', 'score': 0.44}, {'connected_gene': 'GC04M120830', 'score': 0.37}]
chr4	GH04I120921	120921104	120924152	1.83	[{'connected_gene': 'PRDM5', 'score': 558.32}, {'connected_gene': 'LOC105377399', 'score': 550.77}, {'connected_gene': 'GC04P120921', 'score': 550.77}]
chr4	GH04I120849	120849251	120850591	0.38	[{'connected_gene': 'PRDM5', 'score': 5.75}, {'connected_gene': 'GC04M120830', 'score': 0.37}, {'connected_gene': 'SETP12', 'score': 0.25}]
chr4	GH04I120772	120772708	120774138	0.46	[{'connected_gene': 'PRDM5', 'score': 10.91}, {'connected_gene': 'GC04P120811', 'score': 0.28}, {'connected_gene': 'ENSG00000249409', 'score': 0.12}]
chr4	GH04I120801	120801200	120801715	0.66	[{'connected_gene': 'PRDM5', 'score': 8.93}, {'connected_gene': 'GC04P120811', 'score': 0.44}, {'connected_gene': 'ENSG00000249409', 'score': 0.1}]
chr4	GH04I120762	120762185	120765976	0.43	[{'connected_gene': 'PRDM5', 'score': 7.33}, {'connected_gene': 'GC04P120811', 'score': 0.25}, {'connected_gene': 'ENSG00000249409', 'score': 0.13}]
chr4	GH04I120755	120755186	120756059	0.2	[{'connected_gene': 'PRDM5', 'score': 8.29}, {'connected_gene': 'GC04P120811', 'score': 0.23}, {'connected_gene': 'ENSG00000249409', 'score': 0.13}]
chr4	GH04I120769	120769215	120769975	0.74	[{'connected_gene': 'PRDM5', 'score': 19.61}, {'connected_gene': 'GC04P120811', 'score': 0.26}, {'connected_gene': 'ENSG00000249409', 'score': 0.12}]
chr4	GH04I120703	120703492	120705282	0.2	[{'connected_gene': 'PRDM5', 'score': 5.92}, {'connected_gene': 'ENSG00000249409', 'score': 0.2}, {'connected_gene': 'GC04P120811', 'score': 0.14}]
chr4	GH04I120816	120815526	120815675	0.2	[{'connected_gene': 'RNU6-550P', 'score': 0.44}, {'connected_gene': 'GC04M120830', 'score': 0.37}, {'connected_gene': 'PRDM5', 'score': 0.14}]
chr4	GH04I120870	120870446	120870595	0.38	[{'connected_gene': 'SETP12', 'score': 0.31}, {'connected_gene': 'GC04M120830', 'score': 0.28}, {'connected_gene': 'PRDM5', 'score': 0.23}]
chr4	GH04I120920	120920401	120920600	0.31	[{'connected_gene': 'GC04P120921', 'score': 550.77}, {'connected_gene': 'PRDM5', 'score': 0.77}, {'connected_gene': 'SETP12', 'score': 0.34}]
chr4	GH04I120692	120692532	120693775	0.76	[{'connected_gene': 'ENSG00000249409', 'score': 0.23}, {'connected_gene': 'GC04P120811', 'score': 0.13}, {'connected_gene': 'PRDM5', 'score': 0.07}]
chr4	GH04I120760	120760464	120761715	0.2	[{'connected_gene': 'GC04P120811', 'score': 0.25}, {'connected_gene': 'ENSG00000249409', 'score': 0.13}, {'connected_gene': 'PRDM5', 'score': 0.1}]
chr4	GH04I120749	120749526	120749843	0.95	[{'connected_gene': 'GC04P120811', 'score': 0.21}, {'connected_gene': 'ENSG00000249409', 'score': 0.14}, {'connected_gene': 'PRDM5', 'score': 0.09}]