PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000376945	[[95361885, 95364389]]	[[95363472, 95364303]]
NM_007084	[[95361875, 95364797]]	[[95363472, 95364303]]

Promoter

Chrom	Start	End	Description
chr13	95364761	95364780	CAGE_peak_2_at_SOX21_5end
chr13	95364784	95364806	CAGE_peak_1_at_SOX21_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I094710	94710047	94712184	0.93	[{'connected_gene': 'SOX21', 'score': 550.77}, {'connected_gene': 'GC13M094711', 'score': 550.77}, {'connected_gene': 'SOX21-AS1', 'score': 550.77}, {'connected_gene': 'TGDS', 'score': 10.02}, {'connected_gene': 'LOC101927248', 'score': 0.77}]
chr13	GH13I094712	94712307	94713926	0.73	[{'connected_gene': 'SOX21', 'score': 550.77}, {'connected_gene': 'GC13M094711', 'score': 550.77}, {'connected_gene': 'SOX21-AS1', 'score': 550.77}, {'connected_gene': 'GPR180', 'score': 6.19}, {'connected_gene': 'BRD7P5', 'score': 0.25}]
chr13	GH13I094322	94322712	94333580	1.44	[{'connected_gene': 'SOX21', 'score': 1.35}, {'connected_gene': 'GC13P094348', 'score': 0.34}, {'connected_gene': 'GC13P094200', 'score': 0.13}]
chr13	GH13I094705	94705747	94709638	1.69	[{'connected_gene': 'LOC101927248', 'score': 550.77}, {'connected_gene': 'GC13M094696', 'score': 550.77}, {'connected_gene': 'SOX21', 'score': 0.77}]