PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000391806	[[51499262, 51499470], [51501006, 51501140], [51503251, 51503514], [51503679, 51503974], [51504353, 51504431], [51504787, 51504860]]	[[51499314, 51499470], [51501006, 51501140], [51503251, 51503514], [51503679, 51503974], [51504353, 51504423]]
ENST00000291726	[[51499263, 51499470], [51501006, 51501140], [51503251, 51503514], [51503679, 51503839], [51504353, 51504431], [51504787, 51504958]]	[[51499314, 51499470], [51501006, 51501140], [51503251, 51503514], [51503679, 51503839], [51504353, 51504423]]
ENST00000320838	[[51499263, 51499470], [51504353, 51504431], [51504787, 51504958]]	[[51499441, 51499470], [51504353, 51504423]]
ENST00000600767	[[51499263, 51499470], [51501006, 51501140], [51503251, 51503514], [51503679, 51503839], [51504353, 51504431], [51504787, 51504965], [51505663, 51505967]]	[[51499314, 51499470], [51501006, 51501140], [51503251, 51503514], [51503679, 51503839], [51504353, 51504423]]
ENST00000594914	[[51499264, 51499470], [51501006, 51501223]]	None
ENST00000347619	[[51499264, 51499470], [51501006, 51501140], [51504353, 51504431], [51504787, 51504924]]	[[51499314, 51499470], [51501006, 51501140], [51504353, 51504423]]
ENST00000593490	[[51499273, 51499470], [51504353, 51504423]]	[[51499441, 51499470], [51504353, 51504423]]
ENST00000598195	[[51499339, 51499470], [51501006, 51501140], [51502208, 51502491]]	None
ENST00000594669	[[51499415, 51499470], [51501006, 51501140], [51503251, 51503514], [51504353, 51504382]]	[[51503380, 51503514], [51504353, 51504382]]
ENST00000595238	[[51503453, 51503514], [51503679, 51503839], [51504353, 51504431], [51505663, 51505934]]	[[51503453, 51503514], [51503679, 51503839], [51504353, 51504423]]
ENST00000599710	[[51503640, 51503974], [51504353, 51504431], [51504787, 51504859]]	None
NM_144505	[[51499263, 51499470], [51501006, 51501140], [51503251, 51503514], [51503679, 51503974], [51504353, 51504431], [51504787, 51504958]]	[[51499314, 51499470], [51501006, 51501140], [51503251, 51503514], [51503679, 51503974], [51504353, 51504423]]
NM_007196	[[51499263, 51499470], [51501006, 51501140], [51503251, 51503514], [51503679, 51503839], [51504353, 51504431], [51504787, 51504958]]	[[51499314, 51499470], [51501006, 51501140], [51503251, 51503514], [51503679, 51503839], [51504353, 51504423]]
NR_104008	[[51499263, 51499470], [51501006, 51501140], [51503679, 51503839], [51504353, 51504431], [51504787, 51504958]]	None
NM_001281431	[[51499263, 51499470], [51501006, 51501140], [51503251, 51503514], [51504353, 51504431], [51504787, 51504958]]	[[51499314, 51499470], [51501006, 51501140], [51503251, 51503381]]
NM_144506	[[51499263, 51499470], [51501006, 51501140], [51504353, 51504431], [51504787, 51504958]]	[[51499314, 51499470], [51501006, 51501140], [51504353, 51504423]]
NM_144507	[[51499263, 51499470], [51504353, 51504431], [51504787, 51504958]]	[[51499441, 51499470], [51504353, 51504423]]

Promoter

Chrom	Start	End	Description
chr19	51504395	51504409	CAGE_peak_3_at_KLK8_5end
chr19	51504411	51504451	CAGE_peak_2_at_KLK8_5end
chr19	51504852	51504866	CAGE_peak_1_at_KLK8_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I050720	50720488	50726224	2.32	[{'connected_gene': 'CLEC11A', 'score': 570.56}, {'connected_gene': 'C19orf48', 'score': 12.17}, {'connected_gene': 'GPR32', 'score': 12.16}, {'connected_gene': 'AKT1S1', 'score': 11.24}, {'connected_gene': 'SNORD88A', 'score': 10.93}, {'connected_gene': 'SNORD88C', 'score': 10.93}, {'connected_gene': 'SNORD88B', 'score': 10.93}, {'connected_gene': 'LINC01869', 'score': 10.7}, {'connected_gene': 'NUP62', 'score': 10.4}, {'connected_gene': 'KLK1', 'score': 10.36}, {'connected_gene': 'KLK15', 'score': 10.35}, {'connected_gene': 'EMC10', 'score': 5.82}, {'connected_gene': 'KLK8', 'score': 4.82}, {'connected_gene': 'SHANK1', 'score': 4.19}, {'connected_gene': 'GPR32P1', 'score': 0.29}]
chr19	GH19I050991	50991799	50993618	0.54	[{'connected_gene': 'KLK7', 'score': 8.2}, {'connected_gene': 'KLK8', 'score': 7.09}, {'connected_gene': 'ENSG00000267879', 'score': 0.34}]
chr19	GH19I051792	51792599	51794190	0.59	[{'connected_gene': 'FPR3', 'score': 589.02}, {'connected_gene': 'KLK8', 'score': 4.64}, {'connected_gene': 'LOC105372448', 'score': 0.44}, {'connected_gene': 'FPR1', 'score': 0.39}]
chr19	GH19I050999	50999723	51003350	1.52	[{'connected_gene': 'KLK8', 'score': 560.66}, {'connected_gene': 'KLK10', 'score': 6.69}, {'connected_gene': 'ENSG00000269741', 'score': 0.44}, {'connected_gene': 'KLK9', 'score': 0.44}, {'connected_gene': 'KLK7', 'score': 0.37}, {'connected_gene': 'ENSG00000267879', 'score': 0.29}]