PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000395571	[[124260695, 124262560], [124265561, 124268411], [124279512, 124279626], [124286456, 124286735]]	[[124265564, 124268186]]
ENST00000297857	[[124260696, 124262560], [124265561, 124268411], [124279512, 124279626], [124286361, 124286547]]	[[124265564, 124268186]]
ENST00000517516	[[124261899, 124262560], [124279512, 124279631]]	None
ENST00000522655	[[124262369, 124262560], [124265561, 124268411], [124279512, 124279626], [124287579, 124287781]]	[[124265564, 124268186]]
ENST00000602651	[[124264668, 124265682]]	[[124265564, 124265682]]
ENST00000522595	[[124267774, 124268411], [124279512, 124279626], [124286361, 124286724]]	None
ENST00000524267	[[124268159, 124268411], [124279512, 124279626], [124285989, 124286237]]	None
ENST00000480132	[[124268359, 124268411], [124269272, 124269457], [124279512, 124279626], [124286361, 124286506]]	None
NM_001017926	[[124260689, 124262560], [124265561, 124268411], [124279512, 124279626], [124286361, 124286727]]	[[124265564, 124268186]]
NR_037874	[[124260689, 124262560], [124279512, 124279626], [124286361, 124286727]]	None
NM_007222	[[124260689, 124262560], [124265561, 124268411], [124279512, 124279626], [124286456, 124286727]]	[[124265564, 124268186]]
NR_037873	[[124260689, 124262560], [124265561, 124268411], [124279512, 124279626], [124287579, 124287781]]	None

Promoter

Chrom	Start	End	Description
chr8	124286495	124286548	CAGE_peak_1_at_ZHX1_5end
chr8	124286670	124286702	CAGE_peak_3_at_ZHX1_5end
chr8	124286761	124286773	CAGE_peak_4_at_ZHX1_5end
chr8	124286775	124286860	CAGE_peak_2_at_ZHX1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I123722	123722226	123724527	0.43	[{'connected_gene': 'WDYHV1', 'score': 11.44}, {'connected_gene': 'KLHL38', 'score': 10.67}, {'connected_gene': 'FAM91A1', 'score': 10.55}, {'connected_gene': 'TATDN1', 'score': 10.21}, {'connected_gene': 'ZHX1', 'score': 10.12}, {'connected_gene': 'FBXO32', 'score': 9.95}, {'connected_gene': 'LOC105375738', 'score': 9.68}, {'connected_gene': 'FAM83A-AS1', 'score': 9.27}, {'connected_gene': 'LOC105375739', 'score': 0.77}, {'connected_gene': 'ANXA13', 'score': 0.39}]
chr8	GH08I123911	123911114	123913044	0.83	[{'connected_gene': 'FER1L6-AS1', 'score': 10.06}, {'connected_gene': 'ENSG00000254249', 'score': 10.06}, {'connected_gene': 'FER1L6', 'score': 6.5}, {'connected_gene': 'IMPDH1P6', 'score': 6.42}, {'connected_gene': 'ZHX1', 'score': 4.81}, {'connected_gene': 'GC08P123918', 'score': 0.44}]
chr8	GH08I123394	123394349	123397350	2.37	[{'connected_gene': 'ATAD2', 'score': 552.28}, {'connected_gene': 'FAM91A1', 'score': 40.02}, {'connected_gene': 'DERL1', 'score': 23.18}, {'connected_gene': 'C8orf76', 'score': 10.58}, {'connected_gene': 'WDYHV1', 'score': 7.34}, {'connected_gene': 'ZHX1', 'score': 1.3}, {'connected_gene': 'IMPDH1P6', 'score': 0.77}, {'connected_gene': 'GC08M123342', 'score': 0.31}]
chr8	GH08I124005	124005753	124008511	0.93	[{'connected_gene': 'ZHX1', 'score': 4.87}, {'connected_gene': 'GC08P124011', 'score': 0.77}, {'connected_gene': 'GC08P124010', 'score': 0.77}, {'connected_gene': 'GC08P124012', 'score': 0.77}, {'connected_gene': 'PIR31943', 'score': 0.77}, {'connected_gene': 'GC08P124013', 'score': 0.77}, {'connected_gene': 'FER1L6-AS1', 'score': 0.29}, {'connected_gene': 'GC08M123978', 'score': 0.26}, {'connected_gene': 'ENSG00000254000', 'score': 0.18}, {'connected_gene': 'FER1L6', 'score': 0.1}]
chr8	GH08I123276	123276961	123277110	0.38	[{'connected_gene': 'ZHX1', 'score': 550.77}, {'connected_gene': 'LOC392266', 'score': 0.39}]
chr8	GH08I122852	122852814	122854654	0.38	[{'connected_gene': 'ZHX1', 'score': 4.76}, {'connected_gene': 'ENSG00000253372', 'score': 0.25}, {'connected_gene': 'GC08P122905', 'score': 0.23}, {'connected_gene': 'ZHX2', 'score': 0.19}]
chr8	GH08I123250	123250581	123251983	1.01	[{'connected_gene': 'ZHX1', 'score': 11.38}, {'connected_gene': 'FAM83A-AS1', 'score': 10.15}, {'connected_gene': 'WDYHV1', 'score': 9.73}, {'connected_gene': 'ATAD2', 'score': 9.73}, {'connected_gene': 'RNU6-875P', 'score': 9.49}, {'connected_gene': 'MIR548AA1', 'score': 9.48}, {'connected_gene': 'DUTP2', 'score': 9.48}, {'connected_gene': 'GC08M123252', 'score': 0.77}, {'connected_gene': 'C8orf76', 'score': 0.44}, {'connected_gene': 'ZHX1-C8orf76', 'score': 0.34}]
chr8	GH08I123285	123285901	123286070	0.6	[{'connected_gene': 'RNU6-628P', 'score': 11.38}, {'connected_gene': 'RNU6-875P', 'score': 11.35}, {'connected_gene': 'MIR548AA1', 'score': 11.34}, {'connected_gene': 'DUTP2', 'score': 11.34}, {'connected_gene': 'FAM83A', 'score': 10.02}, {'connected_gene': 'FAM83A-AS1', 'score': 9.93}, {'connected_gene': 'KLHL38', 'score': 9.93}, {'connected_gene': 'LOC392266', 'score': 0.77}, {'connected_gene': 'ZHX1', 'score': 0.39}]
chr8	GH08I123585	123585781	123586421	0.46	[{'connected_gene': 'LOC105375738', 'score': 11.52}, {'connected_gene': 'WDYHV1', 'score': 11.48}, {'connected_gene': 'KLHL38', 'score': 11.31}, {'connected_gene': 'FBXO32', 'score': 10.79}, {'connected_gene': 'TATDN1', 'score': 10.21}, {'connected_gene': 'ZHX1', 'score': 10.13}, {'connected_gene': 'RN7SKP155', 'score': 0.77}, {'connected_gene': 'ENSG00000254113', 'score': 0.37}]
chr8	GH08I123269	123269000	123269201	0.72	[{'connected_gene': 'ZHX1-C8orf76', 'score': 0.44}, {'connected_gene': 'ZHX1', 'score': 0.44}, {'connected_gene': 'RNU6-628P', 'score': 0.44}]
chr8	GH08I123271	123271742	123276003	2.07	[{'connected_gene': 'ZHX1-C8orf76', 'score': 550.77}, {'connected_gene': 'ZHX1', 'score': 550.77}, {'connected_gene': 'RNU6-875P', 'score': 10.55}, {'connected_gene': 'MIR548AA1', 'score': 10.54}, {'connected_gene': 'DUTP2', 'score': 10.53}, {'connected_gene': 'FAM83A', 'score': 10.4}, {'connected_gene': 'RNU6-628P', 'score': 0.39}]
chr8	GH08I123267	123267309	123267368	0.5	[{'connected_gene': 'ZHX1-C8orf76', 'score': 550.44}, {'connected_gene': 'RNU6-628P', 'score': 0.77}, {'connected_gene': 'ZHX1', 'score': 0.44}]
chr8	GH08I123253	123253201	123253400	0.2	[{'connected_gene': 'GC08M123252', 'score': 550.77}, {'connected_gene': 'ZHX1', 'score': 11.28}, {'connected_gene': 'FAM83A-AS1', 'score': 10.53}, {'connected_gene': 'RNU6-875P', 'score': 9.84}, {'connected_gene': 'MIR548AA1', 'score': 9.83}, {'connected_gene': 'DUTP2', 'score': 9.82}, {'connected_gene': 'C8orf76', 'score': 0.39}, {'connected_gene': 'ZHX1-C8orf76', 'score': 0.34}]