Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000377084 [[84451343, 84456528]] [[84453551, 84455642]]
NM_052910 [[84451339, 84456528]] [[84453551, 84455642]]
NM_001281503 [[84451339, 84455695], [84456138, 84456528]] [[84453551, 84455642]]
Promoter
Chrom Start End Description
chr13 84455875 84455890 CAGE_peak_1_at_SLITRK1_5end
chr13 84456194 84456209 CAGE_peak_5_at_SLITRK1_5end
chr13 84456417 84456433 CAGE_peak_6_at_SLITRK1_5end
chr13 84456436 84456463 CAGE_peak_4_at_SLITRK1_5end
chr13 84456465 84456491 CAGE_peak_2_at_SLITRK1_5end
chr13 84456498 84456512 CAGE_peak_8_at_SLITRK1_5end
chr13 84456527 84456541 CAGE_peak_7_at_SLITRK1_5end
chr13 84456567 84456578 CAGE_peak_11_at_SLITRK1_5end
chr13 84456591 84456634 CAGE_peak_3_at_SLITRK1_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr13 GH13I083881 83881566 83882634 1.62 [{'connected_gene': 'SLITRK1', 'score': 550.77}, {'connected_gene': 'LOC105370286', 'score': 0.2}]
chr13 GH13I083883 83883046 83883155 0.43 [{'connected_gene': 'SLITRK1', 'score': 550.77}, {'connected_gene': 'VENTXP2', 'score': 0.34}]
chr13 GH13I083100 83100815 83102665 0.77 [{'connected_gene': 'SLITRK1', 'score': 8.91}, {'connected_gene': 'GC13M083079', 'score': 0.39}, {'connected_gene': 'ENSG00000270400', 'score': 0.26}]
chr13 GH13I083221 83221213 83222845 0.46 [{'connected_gene': 'SLITRK1', 'score': 5.94}, {'connected_gene': 'GC13P083229', 'score': 0.44}, {'connected_gene': 'GC13P083166', 'score': 0.22}]
chr13 GH13I083906 83906515 83906620 0.32 [{'connected_gene': 'VENTXP2', 'score': 550.77}, {'connected_gene': 'SLITRK1', 'score': 0.34}]

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