PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000370318	[[74123237, 74123744], [74135186, 74135301], [74138431, 74138534], [74149931, 74150168], [74155250, 74155470], [74161247, 74161982]]	[[74123732, 74123744], [74135186, 74135301], [74138431, 74138534], [74149931, 74150168], [74155250, 74155470], [74161247, 74161904]]
ENST00000370315	[[74133431, 74135301], [74138431, 74138534], [74149931, 74150168], [74155250, 74155470], [74161247, 74161999]]	[[74134949, 74135301], [74138431, 74138534], [74149931, 74150168], [74155250, 74155470], [74161247, 74161904]]
ENST00000459924	[[74149465, 74150168], [74155250, 74155408]]	None

Promoter

Chrom	Start	End	Description
chr6	74161555	74161569	CAGE_peak_5_at_MB21D1_5end
chr6	74161847	74161858	CAGE_peak_3_at_MB21D1_5end
chr6	74161977	74162027	CAGE_peak_1_at_MB21D1_5end
chr6	74162045	74162056	CAGE_peak_2_at_MB21D1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I072824	72824837	72827787	0.8	[{'connected_gene': 'KCNQ5', 'score': 8.46}, {'connected_gene': 'CGAS', 'score': 5.32}, {'connected_gene': 'GC06M072905', 'score': 0.17}, {'connected_gene': 'GC06P072687', 'score': 0.12}]
chr6	GH06I073421	73421429	73423445	1.04	[{'connected_gene': 'OOEP', 'score': 11.85}, {'connected_gene': 'DDX43', 'score': 11.85}, {'connected_gene': 'RPS6P8', 'score': 11.83}, {'connected_gene': 'RPL39P3', 'score': 11.34}, {'connected_gene': 'OOEP-AS1', 'score': 11.33}, {'connected_gene': 'CGAS', 'score': 0.31}]
chr6	GH06I073577	73577158	73582217	1.77	[{'connected_gene': 'SLC17A5', 'score': 34.39}, {'connected_gene': 'MTO1', 'score': 21.44}, {'connected_gene': 'EEF1A1', 'score': 19.63}, {'connected_gene': 'LOC105377857', 'score': 13.01}, {'connected_gene': 'CD109', 'score': 10.79}, {'connected_gene': 'CGAS', 'score': 7.2}, {'connected_gene': 'GC06P073558', 'score': 0.34}, {'connected_gene': 'GC06P073601', 'score': 0.34}]
chr6	GH06I073584	73584602	73587668	1.73	[{'connected_gene': 'SLC17A5', 'score': 32.93}, {'connected_gene': 'EEF1A1', 'score': 17.94}, {'connected_gene': 'LOC105377857', 'score': 12.99}, {'connected_gene': 'EIF3EP1', 'score': 12.58}, {'connected_gene': 'CGAS', 'score': 12.12}, {'connected_gene': 'ENSG00000229852', 'score': 11.72}, {'connected_gene': 'CD109', 'score': 7.46}, {'connected_gene': 'GC06P073601', 'score': 0.37}, {'connected_gene': 'GC06P073558', 'score': 0.31}]
chr6	GH06I073665	73665255	73667089	0.52	[{'connected_gene': 'SLC17A5', 'score': 10.3}, {'connected_gene': 'CGAS', 'score': 5.56}, {'connected_gene': 'GC06M073661', 'score': 0.77}, {'connected_gene': 'CD109', 'score': 0.44}]
chr6	GH06I073454	73454379	73455222	0.51	[{'connected_gene': 'MTO1', 'score': 7.63}, {'connected_gene': 'SLC17A5', 'score': 7.35}, {'connected_gene': 'CGAS', 'score': 0.77}]
chr6	GH06I073455	73455601	73456600	0.79	[{'connected_gene': 'MTO1', 'score': 9.69}, {'connected_gene': 'SLC17A5', 'score': 7.48}, {'connected_gene': 'CGAS', 'score': 0.77}]
chr6	GH06I073449	73449858	73450007	0.49	[{'connected_gene': 'MTO1', 'score': 7.52}, {'connected_gene': 'CGAS', 'score': 0.77}, {'connected_gene': 'OOEP', 'score': 0.23}]
chr6	GH06I073809	73809069	73809247	0.23	[{'connected_gene': 'CD109', 'score': 3.11}, {'connected_gene': 'CGAS', 'score': 1.64}, {'connected_gene': 'PIR44699', 'score': 0.2}, {'connected_gene': 'LOC101928489', 'score': 0.14}]
chr6	GH06I073720	73720817	73725908	1.35	[{'connected_gene': 'CD109', 'score': 37.26}, {'connected_gene': 'LOC101928489', 'score': 13.31}, {'connected_gene': 'SLC17A5', 'score': 13.11}, {'connected_gene': 'CGAS', 'score': 3.69}, {'connected_gene': 'EEF1A1', 'score': 3.67}, {'connected_gene': 'PIR44699', 'score': 0.1}]
chr6	GH06I073450	73450063	73453251	1.81	[{'connected_gene': 'CGAS', 'score': 550.77}, {'connected_gene': 'MTO1', 'score': 18.87}, {'connected_gene': 'SLC17A5', 'score': 7.48}, {'connected_gene': 'EIF3EP1', 'score': 5.74}, {'connected_gene': 'OOEP', 'score': 0.22}]