PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000547990	[[55224302, 55224659], [55248899, 55248941], [55250553, 55250676], [55251976, 55252044]]	None
ENST00000546809	[[55233152, 55233231], [55248899, 55248941], [55250553, 55250676], [55251976, 55252171]]	[[55233188, 55233231], [55248899, 55248941], [55250553, 55250676], [55251976, 55252026]]
ENST00000547958	[[55248299, 55248424], [55248899, 55249264]]	None
ENST00000308796	[[55248320, 55248424], [55248899, 55248941], [55250553, 55250676], [55251976, 55252177]]	[[55248366, 55248424], [55248899, 55248941], [55250553, 55250676], [55251976, 55252026]]
NM_058173	[[55248298, 55248424], [55248899, 55248941], [55250553, 55250676], [55251976, 55252177]]	[[55248366, 55248424], [55248899, 55248941], [55250553, 55250676], [55251976, 55252026]]

Promoter

Chrom	Start	End	Description
chr12	55224189	55224198	CAGE_peak_9_at_MUCL1_5end
chr12	55224312	55224339	CAGE_peak_6_at_MUCL1_5end
chr12	55224343	55224377	CAGE_peak_4_at_MUCL1_5end
chr12	55224381	55224392	CAGE_peak_7_at_MUCL1_5end
chr12	55224450	55224471	CAGE_peak_2_at_MUCL1_5end
chr12	55224476	55224495	CAGE_peak_3_at_MUCL1_5end
chr12	55224505	55224522	CAGE_peak_5_at_MUCL1_5end
chr12	55224582	55224591	CAGE_peak_10_at_MUCL1_5end
chr12	55248289	55248306	CAGE_peak_1_at_MUCL1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I054932	54932494	54938054	1.54	[{'connected_gene': 'TESPA1', 'score': 10.88}, {'connected_gene': 'NEUROD4', 'score': 9.9}, {'connected_gene': 'MUCL1', 'score': 5.01}, {'connected_gene': 'NCKAP1L', 'score': 1.89}, {'connected_gene': 'OR6C65', 'score': 1.44}, {'connected_gene': 'OR6C3', 'score': 1.17}, {'connected_gene': 'LOC105369778', 'score': 0.39}, {'connected_gene': 'GC12P054906', 'score': 0.31}]
chr12	GH12I054740	54740309	54742655	0.2	[{'connected_gene': 'TESPA1', 'score': 10.54}, {'connected_gene': 'MUCL1', 'score': 8.14}, {'connected_gene': 'GC12M054691', 'score': 0.37}, {'connected_gene': 'ENSG00000257634', 'score': 0.22}]
chr12	GH12I054857	54857489	54857698	0.23	[{'connected_gene': 'GPR84', 'score': 27.13}, {'connected_gene': 'TESPA1', 'score': 10.22}, {'connected_gene': 'ZNF385A', 'score': 6.76}, {'connected_gene': 'ITGA5', 'score': 2.92}, {'connected_gene': 'NCKAP1L', 'score': 2.62}, {'connected_gene': 'GC12P054861', 'score': 0.77}, {'connected_gene': 'MUCL1', 'score': 0.31}]
chr12	GH12I054847	54847001	54847400	0.43	[{'connected_gene': 'ZNF385A', 'score': 5.73}, {'connected_gene': 'MUCL1', 'score': 5.49}, {'connected_gene': 'GC12P054861', 'score': 0.39}]
chr12	GH12I054734	54734184	54735132	0.56	[{'connected_gene': 'MUCL1', 'score': 7.73}, {'connected_gene': 'GC12M054691', 'score': 0.34}, {'connected_gene': 'ENSG00000257634', 'score': 0.23}]
chr12	GH12I054854	54854037	54854186	0.62	[{'connected_gene': 'MUCL1', 'score': 5.57}, {'connected_gene': 'GC12P054861', 'score': 0.44}]
chr12	GH12I054855	54854467	54854526	0.73	[{'connected_gene': 'MUCL1', 'score': 550.34}, {'connected_gene': 'GC12P054861', 'score': 0.44}]