PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000465232	[[124713896, 124714084], [124742787, 124743030], [124745815, 124745891], [124746384, 124746478], [124749689, 124749906]]	None
ENST00000368887	[[124739555, 124740211], [124742248, 124742540], [124742787, 124742986], [124745815, 124745891], [124746384, 124746478], [124746849, 124747020], [124749689, 124749906]]	[[124739995, 124740211], [124742248, 124742540], [124742787, 124742986], [124745815, 124745891], [124746384, 124746478]]
ENST00000405485	[[124739929, 124740211], [124742248, 124742540], [124742787, 124742986], [124745815, 124747020], [124749689, 124749908]]	[[124739995, 124740211], [124742248, 124742540], [124742787, 124742986], [124745815, 124745978]]
ENST00000406217	[[124739993, 124740211], [124742248, 124742540], [124742787, 124742986], [124745815, 124745891], [124746384, 124746478], [124749689, 124749908]]	[[124739993, 124740211], [124742248, 124742540], [124742787, 124742986], [124745815, 124745891], [124746384, 124746478], [124749689, 124749889]]
ENST00000483455	[[124740046, 124740211], [124742787, 124742986], [124745815, 124745891], [124746384, 124746478], [124749689, 124749851]]	None
ENST00000497219	[[124741499, 124742540], [124742787, 124742986], [124745815, 124745891], [124746384, 124746478], [124746849, 124747020], [124749689, 124749923], [124756634, 124757029]]	None
ENST00000493461	[[124741978, 124742540], [124742787, 124745763]]	None
ENST00000483755	[[124742432, 124742540], [124742787, 124742986], [124745815, 124745891], [124749689, 124749908]]	None
ENST00000496079	[[124742805, 124742986], [124745815, 124745891], [124746384, 124746478], [124749689, 124749923], [124754158, 124754445]]	None
NM_153336	[[124739555, 124740211], [124742248, 124742540], [124742787, 124742986], [124745815, 124745891], [124746384, 124746478], [124746849, 124747020], [124749689, 124749906]]	[[124739995, 124740211], [124742248, 124742540], [124742787, 124742986], [124745815, 124745891], [124746384, 124746478]]

Promoter

Chrom	Start	End	Description
chr10	124713933	124714023	CAGE_peak_2_at_PSTK_5end
chr10	124739911	124739957	CAGE_peak_1_at_PSTK_5end
chr10	124739964	124739977	CAGE_peak_3_at_PSTK_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I122939	122939094	122940492	0.56	[{'connected_gene': 'C10orf88', 'score': 6.96}, {'connected_gene': 'ACADSB', 'score': 4.89}, {'connected_gene': 'PSTK', 'score': 0.39}, {'connected_gene': 'FAM24A', 'score': 0.31}, {'connected_gene': 'GC10M122775', 'score': 0.21}]
chr10	GH10I122953	122953200	122954934	2.09	[{'connected_gene': 'C10orf88', 'score': 575.86}, {'connected_gene': 'PSTK', 'score': 550.77}, {'connected_gene': 'BUB3', 'score': 35.85}, {'connected_gene': 'IKZF5', 'score': 19.4}, {'connected_gene': 'FAM24A', 'score': 0.26}, {'connected_gene': 'GC10M122775', 'score': 0.25}]
chr10	GH10I122930	122930335	122931984	0.82	[{'connected_gene': 'ACADSB', 'score': 14.67}, {'connected_gene': 'IKZF5', 'score': 10.19}, {'connected_gene': 'PSTK', 'score': 0.34}, {'connected_gene': 'FAM24A', 'score': 0.34}, {'connected_gene': 'C10orf88', 'score': 0.34}, {'connected_gene': 'GC10M122775', 'score': 0.2}]
chr10	GH10I122979	122979686	122981434	2.06	[{'connected_gene': 'PSTK', 'score': 550.31}, {'connected_gene': 'ACADSB', 'score': 23.45}, {'connected_gene': 'BUB3', 'score': 16.98}, {'connected_gene': 'IKZF5', 'score': 11.59}, {'connected_gene': 'BTBD16', 'score': 5.2}, {'connected_gene': 'GC10M122775', 'score': 0.34}, {'connected_gene': 'C10orf88', 'score': 0.31}]