Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000375318 [[30900717, 30900953], [30901750, 30901829], [30915033, 30915192], [30915705, 30915869], [30918521, 30918691]] [[30900883, 30900953], [30901750, 30901829], [30915033, 30915192], [30915705, 30915869], [30918521, 30918634]]
NM_183058 [[30900707, 30900953], [30901750, 30901829], [30915033, 30915192], [30915705, 30915869], [30918521, 30918647]] [[30900883, 30900953], [30901750, 30901829], [30915033, 30915192], [30915705, 30915869], [30918521, 30918634]]
Promoter
Chrom Start End Description
chr10 30918669 30918687 CAGE_peak_1_at_LYZL2_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr10 GH10I030641 30641201 30641400 0.4 [{'connected_gene': 'SVILP1', 'score': 0.39}, {'connected_gene': 'LYZL2', 'score': 0.39}]
chr10 GH10I030655 30655112 30655261 0.2 [{'connected_gene': 'SVILP1', 'score': 550.77}, {'connected_gene': 'LYZL2', 'score': 0.31}]
chr10 GH10I030642 30642801 30646055 1.26 [{'connected_gene': 'MAP3K8', 'score': 11.18}, {'connected_gene': 'ENSG00000259994', 'score': 10.06}, {'connected_gene': 'SVILP1', 'score': 0.39}, {'connected_gene': 'LYZL2', 'score': 0.39}]
chr10 GH10I030651 30651153 30652200 0.92 [{'connected_gene': 'MAP3K8', 'score': 11.18}, {'connected_gene': 'SVILP1', 'score': 0.77}, {'connected_gene': 'LYZL2', 'score': 0.34}]
chr10 GH10I030638 30638172 30638361 1.01 [{'connected_gene': 'MAP3K8', 'score': 20.38}, {'connected_gene': 'ZNF438', 'score': 16.42}, {'connected_gene': 'LYZL2', 'score': 0.44}, {'connected_gene': 'SVILP1', 'score': 0.37}]
chr10 GH10I030603 30603266 30603460 0.34 [{'connected_gene': 'MAP3K8', 'score': 11.6}, {'connected_gene': 'ZNF438', 'score': 8.01}, {'connected_gene': 'LOC105376479', 'score': 0.37}, {'connected_gene': 'LYZL2', 'score': 0.31}]
chr10 GH10I030591 30591312 30591461 0.67 [{'connected_gene': 'MAP3K8', 'score': 11.72}, {'connected_gene': 'LOC105376479', 'score': 0.77}, {'connected_gene': 'LYZL2', 'score': 0.28}]
chr10 GH10I030640 30640161 30640201 0.76 [{'connected_gene': 'LYZL2', 'score': 0.39}, {'connected_gene': 'SVILP1', 'score': 0.37}]
chr10 GH10I030630 30630498 30630998 0.5 [{'connected_gene': 'LYZL2', 'score': 550.77}, {'connected_gene': 'MAP3K8', 'score': 20.87}, {'connected_gene': 'ZNF438', 'score': 12.49}, {'connected_gene': 'SVILP1', 'score': 0.34}]
chr10 GH10I030629 30629718 30629777 0.5 [{'connected_gene': 'LYZL2', 'score': 550.77}, {'connected_gene': 'LOC105376479', 'score': 0.26}]
chr10 GH10I030617 30617272 30617361 0.67 [{'connected_gene': 'LYZL2', 'score': 0.39}, {'connected_gene': 'LOC105376479', 'score': 0.31}]
chr10 GH10I030611 30611888 30613399 1.08 [{'connected_gene': 'LYZL2', 'score': 0.37}, {'connected_gene': 'LOC105376479', 'score': 0.34}]
chr10 GH10I030589 30589487 30589692 0.3 [{'connected_gene': 'LOC105376479', 'score': 550.77}, {'connected_gene': 'MAP3K8', 'score': 43.72}, {'connected_gene': 'ZNF438', 'score': 11.55}, {'connected_gene': 'LYZL2', 'score': 0.26}]
chr10 GH10I030605 30605400 30606856 1.05 [{'connected_gene': 'LOC105376479', 'score': 0.37}, {'connected_gene': 'LYZL2', 'score': 0.34}]
chr10 GH10I030600 30600092 30600241 0.69 [{'connected_gene': 'LOC105376479', 'score': 0.39}, {'connected_gene': 'LYZL2', 'score': 0.31}]

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