PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000309562	[[48238343, 48239314]]	[[48238361, 48239291]]
NM_001005470	[[48238361, 48239291]]	[[48238361, 48239291]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I048153	48153536	48153971	0.2	[{'connected_gene': 'PTPRJ', 'score': 5.08}, {'connected_gene': 'PIR60737', 'score': 0.31}, {'connected_gene': 'OR4B1', 'score': 0.21}]
chr11	GH11I048165	48165569	48165718	0.2	[{'connected_gene': 'PTPRJ', 'score': 5.09}, {'connected_gene': 'PIR60737', 'score': 0.28}, {'connected_gene': 'OR4B1', 'score': 0.23}]
chr11	GH11I048141	48141782	48141955	0.28	[{'connected_gene': 'MYBPC3', 'score': 10.04}, {'connected_gene': 'FNBP4', 'score': 4.45}, {'connected_gene': 'OR4X2', 'score': 3.57}, {'connected_gene': 'OR4B1', 'score': 2.28}, {'connected_gene': 'OR4S1', 'score': 1.9}, {'connected_gene': 'PTPRJ', 'score': 1.63}, {'connected_gene': 'PIR60737', 'score': 0.39}]
chr11	GH11I048173	48172075	48172111	0.22	[{'connected_gene': 'OR4S1', 'score': 6.4}, {'connected_gene': 'OR4C3', 'score': 6.06}, {'connected_gene': 'OR4X2', 'score': 6.01}, {'connected_gene': 'OR4B1', 'score': 5.16}, {'connected_gene': 'OR4X1', 'score': 2.63}, {'connected_gene': 'PIR60737', 'score': 0.26}]
chr11	GH11I047869	47869310	47870298	1.03	[{'connected_gene': 'OR4C3', 'score': 6.33}, {'connected_gene': 'OR4B1', 'score': 6.22}, {'connected_gene': 'OR4S1', 'score': 6.22}, {'connected_gene': 'PTPRJ', 'score': 4.76}, {'connected_gene': 'OR4X2', 'score': 3.68}, {'connected_gene': 'NUP160', 'score': 0.34}, {'connected_gene': 'GC11M055361', 'score': 0.28}]
chr11	GH11I047912	47912253	47925411	1.74	[{'connected_gene': 'NUP160', 'score': 26.32}, {'connected_gene': 'KBTBD4', 'score': 17.88}, {'connected_gene': 'PTPRJ', 'score': 16.54}, {'connected_gene': 'FNBP4', 'score': 15.99}, {'connected_gene': 'C1QTNF4', 'score': 15.81}, {'connected_gene': 'MADD', 'score': 14.68}, {'connected_gene': 'ENSG00000270060', 'score': 11.88}, {'connected_gene': 'PTPRJ-AS1', 'score': 11.32}, {'connected_gene': 'DDB2', 'score': 11.3}, {'connected_gene': 'ARFGAP2', 'score': 11.11}, {'connected_gene': 'ENSG00000200090', 'score': 10.32}, {'connected_gene': 'MYBPC3', 'score': 10.15}, {'connected_gene': 'ACP2', 'score': 6.5}, {'connected_gene': 'PSMC3', 'score': 6.0}, {'connected_gene': 'ENSG00000256897', 'score': 5.47}, {'connected_gene': 'FAM180B', 'score': 5.05}, {'connected_gene': 'PACSIN3', 'score': 4.79}, {'connected_gene': 'OR4X1', 'score': 4.45}, {'connected_gene': 'OR4B1', 'score': 1.92}, {'connected_gene': 'OR4C3', 'score': 1.55}, {'connected_gene': 'OR4S1', 'score': 1.33}, {'connected_gene': 'LOC100287189', 'score': 0.39}, {'connected_gene': 'PIR55104', 'score': 0.28}]
chr11	GH11I048103	48103573	48110876	1.61	[{'connected_gene': 'NUP160', 'score': 16.36}, {'connected_gene': 'OR4S1', 'score': 12.76}, {'connected_gene': 'PTPRJ-AS1', 'score': 12.46}, {'connected_gene': 'PTPRJ', 'score': 11.66}, {'connected_gene': 'OR4B1', 'score': 11.25}, {'connected_gene': 'PACSIN3', 'score': 6.34}, {'connected_gene': 'ACP2', 'score': 6.3}, {'connected_gene': 'MADD', 'score': 5.51}, {'connected_gene': 'C1QTNF4', 'score': 5.01}, {'connected_gene': 'OR4X2', 'score': 4.43}, {'connected_gene': 'OR4C3', 'score': 2.77}, {'connected_gene': 'MIR3161', 'score': 0.39}, {'connected_gene': 'PIR60737', 'score': 0.34}]
chr11	GH11I048266	48266777	48266794	0.22	[{'connected_gene': 'OR4B1', 'score': 32.09}, {'connected_gene': 'OR4S1', 'score': 30.13}, {'connected_gene': 'OR4X2', 'score': 17.69}, {'connected_gene': 'OR4C3', 'score': 14.09}, {'connected_gene': 'OR4X1', 'score': 2.25}]
chr11	GH11I048194	48194029	48194178	0.31	[{'connected_gene': 'OR4B1', 'score': 0.34}, {'connected_gene': 'PIR60737', 'score': 0.2}]
chr11	GH11I048164	48164175	48165551	0.57	[{'connected_gene': 'C1QTNF4', 'score': 8.03}, {'connected_gene': 'ACP2', 'score': 6.37}, {'connected_gene': 'PTPRJ', 'score': 5.08}, {'connected_gene': 'PIR60737', 'score': 0.28}, {'connected_gene': 'OR4B1', 'score': 0.23}]
chr11	GH11I047850	47850085	47852036	0.84	[{'connected_gene': 'C1QTNF4', 'score': 15.14}, {'connected_gene': 'MTCH2', 'score': 9.83}, {'connected_gene': 'OR4S1', 'score': 3.9}, {'connected_gene': 'OR4B1', 'score': 3.36}, {'connected_gene': 'OR4X2', 'score': 2.77}, {'connected_gene': 'OR4C3', 'score': 2.04}, {'connected_gene': 'NUP160', 'score': 0.77}, {'connected_gene': 'GC11M055361', 'score': 0.23}]
chr11	GH11I048134	48134592	48134918	0.2	[{'connected_gene': 'PIR60737', 'score': 0.44}, {'connected_gene': 'OR4B1', 'score': 0.18}, {'connected_gene': 'PTPRJ', 'score': 0.1}]
chr11	GH11I048169	48169401	48171400	0.72	[{'connected_gene': 'PIR60737', 'score': 0.26}, {'connected_gene': 'OR4B1', 'score': 0.25}, {'connected_gene': 'PTPRJ', 'score': 0.09}]
chr11	GH11I048172	48172801	48173200	0.66	[{'connected_gene': 'PIR60737', 'score': 0.26}, {'connected_gene': 'OR4B1', 'score': 0.26}]