PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000267584	[[96858447, 96858596], [96864411, 96864600], [96871093, 96871202], [96875183, 96875278], [96887158, 96887269], [96904171, 96904252], [96909066, 96909155], [96912853, 96912944], [96916138, 96916216], [96917757, 96917907], [96922683, 96922812], [96924419, 96924549], [96937814, 96937943], [96939023, 96939092], [96944801, 96944999], [96949335, 96949556], [96953234, 96953393], [96954641, 96955764]]	[[96858491, 96858596], [96864411, 96864600], [96871093, 96871202], [96875183, 96875278], [96887158, 96887269], [96904171, 96904252], [96909066, 96909155], [96912853, 96912944], [96916138, 96916216], [96917757, 96917907], [96922683, 96922812], [96924419, 96924549], [96937814, 96937943], [96939023, 96939092], [96944801, 96944999], [96949335, 96949556], [96953234, 96953393], [96954641, 96954680]]
ENST00000555570	[[96858469, 96858596], [96864411, 96865629]]	[[96858491, 96858596], [96864411, 96864630]]
ENST00000556643	[[96858480, 96858596], [96864411, 96864600], [96871093, 96871389]]	None
ENST00000554313	[[96864534, 96864600], [96871093, 96871202], [96875183, 96875278], [96887158, 96887269], [96887753, 96887903]]	None
ENST00000554706	[[96949318, 96949556], [96953234, 96953393], [96954294, 96954612]]	[[96949318, 96949556], [96953234, 96953393], [96954294, 96954354]]
NM_152327	[[96858447, 96858596], [96864411, 96864600], [96871093, 96871202], [96875183, 96875278], [96887158, 96887269], [96904171, 96904252], [96909066, 96909155], [96912853, 96912944], [96916138, 96916216], [96917757, 96917907], [96922683, 96922812], [96924419, 96924549], [96937814, 96937943], [96939023, 96939092], [96944801, 96944999], [96949335, 96949556], [96953234, 96953393], [96954641, 96955764]]	[[96858491, 96858596], [96864411, 96864600], [96871093, 96871202], [96875183, 96875278], [96887158, 96887269], [96904171, 96904252], [96909066, 96909155], [96912853, 96912944], [96916138, 96916216], [96917757, 96917907], [96922683, 96922812], [96924419, 96924549], [96937814, 96937943], [96939023, 96939092], [96944801, 96944999], [96949335, 96949556], [96953234, 96953393], [96954641, 96954680]]

Promoter

Chrom	Start	End	Description
chr14	96858433	96858453	CAGE_peak_2_at_AK7_5end
chr14	96858454	96858492	CAGE_peak_1_at_AK7_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I096467	96467510	96469560	0.69	[{'connected_gene': 'GSKIP', 'score': 4.5}, {'connected_gene': 'RPL23AP10', 'score': 0.39}, {'connected_gene': 'PAPOLA', 'score': 0.29}, {'connected_gene': 'AK7', 'score': 0.18}]
chr14	GH14I096424	96424000	96424673	1.24	[{'connected_gene': 'PEBP1P1', 'score': 557.27}, {'connected_gene': 'GC14M096423', 'score': 550.77}, {'connected_gene': 'RNU2-33P', 'score': 11.09}, {'connected_gene': 'AK7', 'score': 11.09}, {'connected_gene': 'GSKIP', 'score': 11.02}, {'connected_gene': 'GC14M096457', 'score': 0.29}]
chr14	GH14I096390	96390952	96393000	1.97	[{'connected_gene': 'AK7', 'score': 550.77}, {'connected_gene': 'GSKIP', 'score': 15.68}, {'connected_gene': 'RNU2-33P', 'score': 0.44}]
chr14	GH14I096350	96349352	96349628	0.31	[{'connected_gene': 'AK7', 'score': 11.82}, {'connected_gene': 'RNU2-33P', 'score': 10.59}, {'connected_gene': 'GSKIP', 'score': 10.55}, {'connected_gene': 'ATG2B', 'score': 0.39}, {'connected_gene': 'ENSG00000258729', 'score': 0.19}]
chr14	GH14I096349	96349784	96349973	0.31	[{'connected_gene': 'AK7', 'score': 11.82}, {'connected_gene': 'RNU2-33P', 'score': 10.61}, {'connected_gene': 'GSKIP', 'score': 0.39}, {'connected_gene': 'ATG2B', 'score': 0.39}, {'connected_gene': 'ENSG00000258729', 'score': 0.19}]
chr14	GH14I096460	96460575	96463476	0.92	[{'connected_gene': 'PAPOLA', 'score': 10.95}, {'connected_gene': 'ATG2B', 'score': 10.01}, {'connected_gene': 'GSKIP', 'score': 4.43}, {'connected_gene': 'RPL23AP10', 'score': 0.77}, {'connected_gene': 'AK7', 'score': 0.2}]
chr14	GH14I096479	96479604	96479753	0.38	[{'connected_gene': 'PAPOLA', 'score': 12.0}, {'connected_gene': 'RPL23AP10', 'score': 0.34}, {'connected_gene': 'AK7', 'score': 0.17}]
chr14	GH14I096445	96445823	96446500	0.65	[{'connected_gene': 'PAPOLA', 'score': 11.02}, {'connected_gene': 'RNU2-33P', 'score': 10.03}, {'connected_gene': 'GSKIP', 'score': 9.99}, {'connected_gene': 'GC14M096457', 'score': 0.39}, {'connected_gene': 'PEBP1P1', 'score': 0.34}, {'connected_gene': 'AK7', 'score': 0.23}]
chr14	GH14I096409	96409784	96409953	0.62	[{'connected_gene': 'RNU2-33P', 'score': 11.69}, {'connected_gene': 'GSKIP', 'score': 11.62}, {'connected_gene': 'PAPOLA', 'score': 10.64}, {'connected_gene': 'GC14M096423', 'score': 0.39}, {'connected_gene': 'AK7', 'score': 0.37}]