PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000570670	[[2880253, 2880329], [2880415, 2880494], [2880694, 2880797], [2888376, 2888967]]	[[2880253, 2880329], [2880415, 2880494], [2880694, 2880797], [2888376, 2888404]]
ENST00000382280	[[2880169, 2880329], [2880415, 2880494], [2880694, 2880797], [2881796, 2882285]]	[[2880248, 2880329], [2880415, 2880494], [2880694, 2880797], [2881796, 2882160]]
ENST00000576423	[[2880295, 2880329], [2880415, 2880982]]	None
ENST00000573019	[[2880304, 2880329], [2880415, 2880797], [2881796, 2881976]]	None
ENST00000571723	[[2880306, 2880329], [2880415, 2880494], [2880694, 2881174]]	[[2880306, 2880329], [2880415, 2880494], [2880694, 2880801]]
ENST00000572863	[[2880368, 2880494], [2880694, 2880797], [2881796, 2882283]]	[[2880424, 2880494], [2880694, 2880797], [2881796, 2882160]]
NM_145252	[[2880172, 2880329], [2880415, 2880494], [2880694, 2880797], [2881796, 2882285]]	[[2880248, 2880329], [2880415, 2880494], [2880694, 2880797], [2881796, 2882160]]

Promoter

Chrom	Start	End	Description
chr16	2880157	2880210	CAGE_peak_2_at_ZG16B_5end
chr16	2880215	2880240	CAGE_peak_3_at_ZG16B_5end
chr16	2880267	2880278	CAGE_peak_4_at_ZG16B_5end
chr16	2880296	2880310	CAGE_peak_1_at_ZG16B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I002835	2835261	2837659	1.33	[{'connected_gene': 'SRRM2', 'score': 19.89}, {'connected_gene': 'ZNF263', 'score': 19.68}, {'connected_gene': 'ZG16B', 'score': 19.55}, {'connected_gene': 'SNORA64', 'score': 18.14}, {'connected_gene': 'ENSG00000255513', 'score': 17.39}, {'connected_gene': 'LOC105371055', 'score': 16.56}, {'connected_gene': 'THOC6', 'score': 15.63}, {'connected_gene': 'ZNF598', 'score': 15.54}, {'connected_gene': 'E4F1', 'score': 15.2}, {'connected_gene': 'TRAF7', 'score': 14.78}, {'connected_gene': 'ENSG00000261938', 'score': 13.39}, {'connected_gene': 'AMDHD2', 'score': 12.43}, {'connected_gene': 'SNORD60', 'score': 12.27}, {'connected_gene': 'TSC2', 'score': 11.45}, {'connected_gene': 'ERVK13-1', 'score': 11.33}, {'connected_gene': 'ZNF597', 'score': 11.31}, {'connected_gene': 'TBL3', 'score': 10.71}, {'connected_gene': 'KREMEN2', 'score': 5.07}, {'connected_gene': 'PRSS30P', 'score': 0.44}]
chr16	GH16I002840	2840002	2843221	1.09	[{'connected_gene': 'PRSS30P', 'score': 566.65}, {'connected_gene': 'PRSS22', 'score': 25.48}, {'connected_gene': 'LOC101929566', 'score': 4.72}, {'connected_gene': 'ZG16B', 'score': 0.39}]
chr16	GH16I002838	2838425	2839467	1.05	[{'connected_gene': 'ZG16B', 'score': 9.44}, {'connected_gene': 'PRSS30P', 'score': 0.77}]
chr16	GH16I002829	2829488	2830914	1.47	[{'connected_gene': 'ZG16B', 'score': 585.46}, {'connected_gene': 'PRSS30P', 'score': 0.39}]
chr16	GH16I002816	2816682	2818370	1.82	[{'connected_gene': 'PRSS21', 'score': 550.77}, {'connected_gene': 'ZG16B', 'score': 8.16}, {'connected_gene': 'PRSS41', 'score': 6.69}, {'connected_gene': 'EIF1P4', 'score': 0.44}]
chr16	GH16I002867	2867463	2869489	1.8	[{'connected_gene': 'LOC101929566', 'score': 572.72}, {'connected_gene': 'GC16P003028', 'score': 550.77}, {'connected_gene': 'FLYWCH2', 'score': 13.84}, {'connected_gene': 'ZG16B', 'score': 12.45}, {'connected_gene': 'FLYWCH1', 'score': 11.62}, {'connected_gene': 'SNORA3C', 'score': 11.4}, {'connected_gene': 'PRSS41', 'score': 11.4}, {'connected_gene': 'PRSS33', 'score': 11.38}, {'connected_gene': 'ELOB', 'score': 11.36}, {'connected_gene': 'SRRM2-AS1', 'score': 10.19}]
chr16	GH16I002822	2822828	2823603	0.54	[{'connected_gene': 'EIF1P4', 'score': 550.77}, {'connected_gene': 'ZG16B', 'score': 23.22}, {'connected_gene': 'PRSS21', 'score': 0.44}]