PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000389916	[[72322350, 72322527], [72324563, 72324644], [72338014, 72338125], [72338768, 72338856], [72339162, 72339299], [72340361, 72340487], [72340899, 72341094], [72342516, 72342663], [72343915, 72344038], [72345322, 72345488], [72346539, 72346714], [72346845, 72347044], [72348005, 72348276], [72348357, 72348479], [72348959, 72349093], [72349334, 72349440], [72349632, 72349720], [72350300, 72350698], [72350920, 72351080], [72351320, 72351959]]	[[72322488, 72322527], [72324563, 72324644], [72338014, 72338125], [72338768, 72338856], [72339162, 72339299], [72340361, 72340487], [72340899, 72341094], [72342516, 72342663], [72343915, 72344038], [72345322, 72345488], [72346539, 72346714], [72346845, 72347044], [72348005, 72348276], [72348357, 72348479], [72348959, 72349093], [72349334, 72349440], [72349632, 72349720], [72350300, 72350698], [72350920, 72351080], [72351320, 72351451]]
ENST00000551294	[[72322348, 72322527], [72324563, 72324644], [72338014, 72338125], [72338768, 72338856], [72339162, 72339299], [72340899, 72341094], [72342516, 72342663], [72343915, 72344038], [72345322, 72345488], [72346539, 72346714], [72346845, 72347044], [72348005, 72348276], [72348357, 72348465]]	[[72322488, 72322527], [72324563, 72324644], [72338014, 72338125], [72338768, 72338856], [72339162, 72339299], [72340899, 72341094], [72342516, 72342663], [72343915, 72344038], [72345322, 72345488], [72346539, 72346714], [72346845, 72347044], [72348005, 72348276], [72348357, 72348465]]
ENST00000551017	[[72322364, 72322527], [72324563, 72325605]]	None
ENST00000359939	[[72322369, 72322527], [72324563, 72324644], [72338014, 72338125], [72338768, 72338856], [72339162, 72339299], [72340899, 72341094], [72342516, 72342663], [72343915, 72344038], [72345322, 72345488], [72346539, 72346714], [72346845, 72347484]]	None
ENST00000547389	[[72322395, 72322527], [72324563, 72324644], [72338014, 72338125], [72338768, 72338856], [72339162, 72339299], [72340361, 72340487], [72340899, 72341094], [72342516, 72342663], [72343915, 72344038], [72345322, 72345488], [72346539, 72346714], [72346845, 72347458]]	None
ENST00000549637	[[72344728, 72345488], [72346539, 72346620]]	None
NM_153209	[[72322350, 72322527], [72324563, 72324644], [72338014, 72338125], [72338768, 72338856], [72339162, 72339299], [72340361, 72340487], [72340899, 72341094], [72342516, 72342663], [72343915, 72344038], [72345322, 72345488], [72346539, 72346714], [72346845, 72347044], [72348005, 72348276], [72348357, 72348479], [72348959, 72349093], [72349334, 72349440], [72349632, 72349720], [72350300, 72350698], [72350920, 72351080], [72351320, 72351959]]	[[72322488, 72322527], [72324563, 72324644], [72338014, 72338125], [72338768, 72338856], [72339162, 72339299], [72340361, 72340487], [72340899, 72341094], [72342516, 72342663], [72343915, 72344038], [72345322, 72345488], [72346539, 72346714], [72346845, 72347044], [72348005, 72348276], [72348357, 72348479], [72348959, 72349093], [72349334, 72349440], [72349632, 72349720], [72350300, 72350698], [72350920, 72351080], [72351320, 72351451]]

Promoter

Chrom	Start	End	Description
chr17	72322330	72322343	CAGE_peak_2_at_KIF19_5end
chr17	72322346	72322382	CAGE_peak_1_at_KIF19_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I074360	74360683	74363188	1.4	[{'connected_gene': 'BTBD17', 'score': 550.77}, {'connected_gene': 'GPR142', 'score': 7.83}, {'connected_gene': 'KIF19', 'score': 0.28}]
chr17	GH17I074354	74354162	74354271	0.8	[{'connected_gene': 'GPR142', 'score': 5.24}, {'connected_gene': 'BTBD17', 'score': 0.44}, {'connected_gene': 'KIF19', 'score': 0.31}]
chr17	GH17I074336	74336246	74346305	0.75	[{'connected_gene': 'GPR142', 'score': 17.55}, {'connected_gene': 'CD300LB', 'score': 11.12}, {'connected_gene': 'CD300C', 'score': 11.12}, {'connected_gene': 'ENSG00000236770', 'score': 11.11}, {'connected_gene': 'CD300A', 'score': 10.95}, {'connected_gene': 'MGC16275', 'score': 10.62}, {'connected_gene': 'TTYH2', 'score': 10.62}, {'connected_gene': 'RPL38', 'score': 10.62}, {'connected_gene': 'MRPL58', 'score': 5.11}, {'connected_gene': 'KIF19', 'score': 0.37}, {'connected_gene': 'BTBD17', 'score': 0.34}]
chr17	GH17I074807	74807989	74808242	0.64	[{'connected_gene': 'RAB37', 'score': 33.2}, {'connected_gene': 'GRIN2C', 'score': 25.58}, {'connected_gene': 'NAT9', 'score': 11.27}, {'connected_gene': 'TMEM104', 'score': 11.27}, {'connected_gene': 'CD300E', 'score': 9.96}, {'connected_gene': 'KCTD2', 'score': 3.39}, {'connected_gene': 'FADS6', 'score': 2.87}, {'connected_gene': 'KIF19', 'score': 1.77}, {'connected_gene': 'PIR51683', 'score': 0.77}, {'connected_gene': 'PIR37943', 'score': 0.29}]
chr17	GH17I074331	74331930	74333580	1.09	[{'connected_gene': 'NT5C', 'score': 15.62}, {'connected_gene': 'NUP85', 'score': 12.58}, {'connected_gene': 'KIF19', 'score': 0.44}, {'connected_gene': 'BTBD17', 'score': 0.29}]
chr17	GH17I074813	74813001	74813413	0.78	[{'connected_gene': 'GRIN2C', 'score': 13.96}, {'connected_gene': 'FADS6', 'score': 13.55}, {'connected_gene': 'CD300E', 'score': 9.61}, {'connected_gene': 'KIF19', 'score': 4.71}, {'connected_gene': 'KCTD2', 'score': 2.64}, {'connected_gene': 'RAB37', 'score': 1.36}, {'connected_gene': 'PIR51683', 'score': 0.44}, {'connected_gene': 'PIR37943', 'score': 0.31}, {'connected_gene': 'TMEM104', 'score': 0.28}]
chr17	GH17I074732	74732602	74733672	0.96	[{'connected_gene': 'NAT9', 'score': 33.69}, {'connected_gene': 'NUP85', 'score': 21.54}, {'connected_gene': 'NT5C', 'score': 19.44}, {'connected_gene': 'GGA3', 'score': 18.11}, {'connected_gene': 'SAP30BP', 'score': 11.54}, {'connected_gene': 'RN7SL573P', 'score': 11.34}, {'connected_gene': 'RAB37', 'score': 7.04}, {'connected_gene': 'GRIN2C', 'score': 5.74}, {'connected_gene': 'KCTD2', 'score': 1.93}, {'connected_gene': 'KIF19', 'score': 1.38}, {'connected_gene': 'FADS6', 'score': 1.34}, {'connected_gene': 'SLC9A3R1', 'score': 0.37}, {'connected_gene': 'CD300LF', 'score': 0.34}]
chr17	GH17I074192	74192819	74194203	1.3	[{'connected_gene': 'KIF19', 'score': 1.91}, {'connected_gene': 'RPL38', 'score': 0.39}, {'connected_gene': 'LINC02074', 'score': 0.28}]
chr17	GH17I074324	74324986	74327259	1.24	[{'connected_gene': 'KIF19', 'score': 556.11}, {'connected_gene': 'GC17M074321', 'score': 550.77}]
chr17	GH17I074108	74108342	74108587	0.37	[{'connected_gene': 'LINC02074', 'score': 4.85}, {'connected_gene': 'KIF19', 'score': 1.95}, {'connected_gene': 'PIR51734', 'score': 0.37}]