PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000457880	[[75198835, 75199102], [75202225, 75202306], [75214434, 75214506], [75217975, 75218109], [75229577, 75232358]]	[[75198928, 75199102], [75202225, 75202306], [75214434, 75214506], [75217975, 75218109], [75229577, 75229797]]
ENST00000370867	[[75198839, 75199102], [75202225, 75202306], [75204373, 75204472], [75214434, 75214506], [75217975, 75218109], [75229577, 75232358]]	[[75198928, 75199102], [75202225, 75202306], [75204373, 75204472], [75214434, 75214506], [75217975, 75218109], [75229577, 75229797]]
ENST00000421739	[[75198857, 75199102], [75217975, 75218109], [75229577, 75230141]]	[[75198928, 75199102], [75217975, 75218109], [75229577, 75229797]]
ENST00000479111	[[75198930, 75199102], [75199801, 75199866], [75202225, 75202306], [75204373, 75204472], [75214434, 75214506], [75217975, 75218109], [75229577, 75230084]]	[[75214440, 75214506], [75217975, 75218109], [75229577, 75229797]]
ENST00000483990	[[75201872, 75202306], [75204373, 75204472], [75214434, 75214506], [75217975, 75218078]]	[[75214440, 75214506], [75217975, 75218078]]
ENST00000485401	[[75214324, 75214506], [75217975, 75218109], [75227342, 75227443], [75229577, 75229673]]	None
ENST00000449696	[[75215806, 75215960], [75216732, 75217126], [75217975, 75218059]]	None
ENST00000486467	[[75216817, 75217126], [75217975, 75218109], [75229577, 75229685]]	None
ENST00000467646	[[75229576, 75229834], [75231967, 75232362]]	None
NM_001162916	[[75198835, 75199102], [75202225, 75202306], [75214434, 75214506], [75217975, 75218109], [75229577, 75232361]]	[[75198928, 75199102], [75202225, 75202306], [75214434, 75214506], [75217975, 75218109], [75229577, 75229797]]
NM_138467	[[75198839, 75199102], [75202225, 75202306], [75204373, 75204472], [75214434, 75214506], [75217975, 75218109], [75229577, 75232361]]	[[75198928, 75199102], [75202225, 75202306], [75204373, 75204472], [75214434, 75214506], [75217975, 75218109], [75229577, 75229797]]
NR_027962	[[75198861, 75199215], [75202225, 75202306], [75204373, 75204472], [75214434, 75214506], [75217975, 75218109], [75229577, 75232361]]	None

Promoter

Chrom	Start	End	Description
chr1	75198792	75198803	CAGE_peak_4_at_TYW3_5end
chr1	75198828	75198868	CAGE_peak_1_at_TYW3_5end
chr1	75198871	75198932	CAGE_peak_2_at_TYW3_5end
chr1	75198995	75199006	CAGE_peak_3_at_TYW3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I074729	74729846	74734968	2.49	[{'connected_gene': 'CRYZ', 'score': 627.28}, {'connected_gene': 'TYW3', 'score': 567.98}, {'connected_gene': 'ENSG00000272864', 'score': 0.29}]
chr1	GH01I074693	74693302	74694318	0.2	[{'connected_gene': 'ERICH3', 'score': 12.76}, {'connected_gene': 'LRRC53', 'score': 10.37}, {'connected_gene': 'ENSG00000272864', 'score': 7.86}, {'connected_gene': 'TYW3', 'score': 4.9}]
chr1	GH01I074964	74964358	74964671	0.86	[{'connected_gene': 'ENSG00000229943', 'score': 550.77}, {'connected_gene': 'TYW3', 'score': 12.65}, {'connected_gene': 'DLSTP1', 'score': 11.12}, {'connected_gene': 'GC01P074970', 'score': 0.44}]