PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000371956	[[46972667, 46972836], [46976132, 46976326], [46976606, 46976955], [46977714, 46979884]]	[[46972682, 46972836], [46976132, 46976326], [46976606, 46976955], [46977714, 46978166]]
ENST00000360032	[[46972668, 46972836], [46976147, 46976326], [46976606, 46976955], [46977714, 46979898]]	[[46972682, 46972836], [46976147, 46976326], [46976606, 46976955], [46977714, 46978166]]
NM_147192	[[46972667, 46972835], [46976131, 46976326], [46976606, 46976955], [46977714, 46979898]]	[[46972682, 46972835], [46976131, 46976326], [46976606, 46976955], [46977714, 46978166]]
NM_172225	[[46972667, 46972836], [46976147, 46976326], [46976606, 46976955], [46977714, 46979898]]	[[46972682, 46972836], [46976147, 46976326], [46976606, 46976955], [46977714, 46978166]]

Promoter

Chrom	Start	End	Description
chr1	46972279	46972288	CAGE_peak_1_at_DMBX1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I046477	46477509	46477678	0.83	[{'connected_gene': 'GPBP1L1', 'score': 28.96}, {'connected_gene': 'LRRC41', 'score': 27.28}, {'connected_gene': 'RPL7AP16', 'score': 26.78}, {'connected_gene': 'EFCAB14-AS1', 'score': 23.98}, {'connected_gene': 'RPS15AP10', 'score': 11.99}, {'connected_gene': 'MOB3C', 'score': 10.74}, {'connected_gene': 'DMBX1', 'score': 0.39}, {'connected_gene': 'LINC01398', 'score': 0.31}, {'connected_gene': 'FAAHP1', 'score': 0.25}]
chr1	GH01I046516	46516549	46518609	1.05	[{'connected_gene': 'KNCN', 'score': 11.97}, {'connected_gene': 'MOB3C', 'score': 5.03}, {'connected_gene': 'MKNK1', 'score': 5.0}, {'connected_gene': 'GC01P046525', 'score': 0.44}, {'connected_gene': 'DMBX1', 'score': 0.31}]
chr1	GH01I046489	46489729	46489858	0.81	[{'connected_gene': 'DMBX1', 'score': 550.77}, {'connected_gene': 'GPBP1L1', 'score': 26.45}, {'connected_gene': 'EFCAB14-AS1', 'score': 22.88}, {'connected_gene': 'LRRC41', 'score': 22.03}, {'connected_gene': 'NSUN4', 'score': 20.69}, {'connected_gene': 'RPL7AP16', 'score': 12.96}, {'connected_gene': 'MOB3C', 'score': 12.24}, {'connected_gene': 'LINC01389', 'score': 10.72}, {'connected_gene': 'LINC01398', 'score': 0.28}]
chr1	GH01I046490	46490065	46490246	0.77	[{'connected_gene': 'DMBX1', 'score': 564.16}, {'connected_gene': 'GC01P046525', 'score': 0.28}]
chr1	GH01I046506	46506934	46506993	0.97	[{'connected_gene': 'DMBX1', 'score': 550.37}, {'connected_gene': 'GC01P046525', 'score': 0.37}]
chr1	GH01I046466	46466053	46467736	0.94	[{'connected_gene': 'LINC01398', 'score': 0.37}, {'connected_gene': 'DMBX1', 'score': 0.34}, {'connected_gene': 'FAAHP1', 'score': 0.29}]
chr1	GH01I046519	46519827	46523387	1.47	[{'connected_gene': 'EFCAB14-AS1', 'score': 33.93}, {'connected_gene': 'GPBP1L1', 'score': 28.96}, {'connected_gene': 'LRRC41', 'score': 27.27}, {'connected_gene': 'RPL7AP16', 'score': 26.78}, {'connected_gene': 'DMBX1', 'score': 18.33}, {'connected_gene': 'RPS15AP10', 'score': 11.99}, {'connected_gene': 'KNCN', 'score': 11.95}, {'connected_gene': 'EFCAB14', 'score': 11.06}, {'connected_gene': 'MOB3C', 'score': 10.78}, {'connected_gene': 'TEX38', 'score': 10.04}, {'connected_gene': 'ATPAF1', 'score': 10.04}, {'connected_gene': 'MKNK1', 'score': 6.61}, {'connected_gene': 'CYP4Z1', 'score': 4.92}, {'connected_gene': 'FAAH', 'score': 4.58}, {'connected_gene': 'GC01P046525', 'score': 0.77}]
chr1	GH01I046527	46527049	46527258	0.74	[{'connected_gene': 'GC01P046525', 'score': 550.77}, {'connected_gene': 'DMBX1', 'score': 12.59}, {'connected_gene': 'KNCN', 'score': 11.99}, {'connected_gene': 'EFCAB14', 'score': 10.05}, {'connected_gene': 'MKNK1', 'score': 5.19}, {'connected_gene': 'LOC105378696', 'score': 0.44}]
chr1	GH01I046523	46523661	46524127	0.52	[{'connected_gene': 'GC01P046525', 'score': 550.77}, {'connected_gene': 'DMBX1', 'score': 12.61}, {'connected_gene': 'KNCN', 'score': 11.96}, {'connected_gene': 'EFCAB14', 'score': 10.05}, {'connected_gene': 'FAAH', 'score': 4.54}]