PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000334438	[[158368311, 158369256]]	[[158368311, 158369256]]
NM_001004475	[[158368311, 158369256]]	[[158368311, 158369256]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I158247	158247601	158249800	1.3	[{'connected_gene': 'CD1A', 'score': 550.77}, {'connected_gene': 'CD1C', 'score': 14.02}, {'connected_gene': 'CD1E', 'score': 5.94}, {'connected_gene': 'CD1D', 'score': 4.5}, {'connected_gene': 'CD1B', 'score': 3.81}, {'connected_gene': 'OR10T2', 'score': 2.31}, {'connected_gene': 'GC01P158261', 'score': 0.44}, {'connected_gene': 'GC01P158260', 'score': 0.44}]
chr1	GH01I158333	158333888	158334071	0.46	[{'connected_gene': 'CD1E', 'score': 22.01}, {'connected_gene': 'CD1B', 'score': 8.18}, {'connected_gene': 'OR6Y1', 'score': 3.55}, {'connected_gene': 'OR10K2', 'score': 2.75}, {'connected_gene': 'OR6K6', 'score': 2.44}, {'connected_gene': 'OR10T2', 'score': 2.22}, {'connected_gene': 'CD1C', 'score': 1.67}]
chr1	GH01I158395	158395091	158397072	0.2	[{'connected_gene': 'CD1E', 'score': 5.59}, {'connected_gene': 'OR10T2', 'score': 0.77}]
chr1	GH01I158353	158353801	158354200	1.01	[{'connected_gene': 'CD1E', 'score': 550.77}, {'connected_gene': 'OR10T2', 'score': 0.25}]
chr1	GH01I158389	158389129	158394204	0.2	[{'connected_gene': 'CD1E', 'score': 6.33}, {'connected_gene': 'OR10T2', 'score': 0.44}]
chr1	GH01I158361	158361950	158366193	0.31	[{'connected_gene': 'CD1B', 'score': 11.17}, {'connected_gene': 'OR10T2', 'score': 11.05}, {'connected_gene': 'CD1C', 'score': 10.47}, {'connected_gene': 'OR10K2', 'score': 10.21}, {'connected_gene': 'OR10X1', 'score': 9.48}, {'connected_gene': 'CD1E', 'score': 5.13}]
chr1	GH01I158358	158358359	158360954	0.2	[{'connected_gene': 'SPTA1', 'score': 13.68}, {'connected_gene': 'OR10T2', 'score': 11.05}, {'connected_gene': 'CD1B', 'score': 10.67}, {'connected_gene': 'CD1C', 'score': 10.36}, {'connected_gene': 'OR10R2', 'score': 10.06}, {'connected_gene': 'CD1E', 'score': 0.44}]
chr1	GH01I157991	157991414	158023607	2.66	[{'connected_gene': 'KIRREL1', 'score': 563.87}, {'connected_gene': 'LOC246784', 'score': 15.81}, {'connected_gene': 'CD1E', 'score': 11.24}, {'connected_gene': 'OR10T2', 'score': 3.31}, {'connected_gene': 'KIRREL1-IT1', 'score': 0.37}]
chr1	GH01I158425	158425793	158426670	0.2	[{'connected_gene': 'OR10K2', 'score': 550.77}, {'connected_gene': 'CD1E', 'score': 10.68}, {'connected_gene': 'OR10T2', 'score': 10.59}, {'connected_gene': 'CD1B', 'score': 7.35}]
chr1	GH01I158424	158424070	158424630	0.2	[{'connected_gene': 'OR10K2', 'score': 550.77}, {'connected_gene': 'CD1B', 'score': 6.49}, {'connected_gene': 'OR10T2', 'score': 0.34}]
chr1	GH01I158426	158424642	158425761	0.2	[{'connected_gene': 'OR10K2', 'score': 550.77}, {'connected_gene': 'CD1B', 'score': 6.45}, {'connected_gene': 'OR10T2', 'score': 0.31}]
chr1	GH01I158410	158410686	158411930	0.2	[{'connected_gene': 'OR10K2', 'score': 0.39}, {'connected_gene': 'OR10T2', 'score': 0.39}]
chr1	GH01I158423	158423268	158424010	0.2	[{'connected_gene': 'OR10K2', 'score': 0.77}, {'connected_gene': 'OR10T2', 'score': 0.34}]
chr1	GH01I158420	158420213	158421340	0.2	[{'connected_gene': 'OR10R2', 'score': 10.05}, {'connected_gene': 'OR10T2', 'score': 9.76}, {'connected_gene': 'CD1B', 'score': 6.47}, {'connected_gene': 'OR10K2', 'score': 0.44}]
chr1	GH01I158407	158407921	158409122	0.2	[{'connected_gene': 'OR10R2', 'score': 10.16}, {'connected_gene': 'OR10T2', 'score': 0.44}, {'connected_gene': 'OR10K2', 'score': 0.37}]
chr1	GH01I158394	158394640	158395021	0.38	[{'connected_gene': 'ACKR1', 'score': 4.49}, {'connected_gene': 'OR10T2', 'score': 0.77}, {'connected_gene': 'CD1E', 'score': 0.26}]
chr1	GH01I158400	158400866	158401183	0.47	[{'connected_gene': 'OR10T2', 'score': 552.49}, {'connected_gene': 'CD1E', 'score': 15.76}, {'connected_gene': 'CD1B', 'score': 4.43}, {'connected_gene': 'OR10K1', 'score': 1.67}, {'connected_gene': 'OR6K3', 'score': 1.49}, {'connected_gene': 'OR6N1', 'score': 1.47}, {'connected_gene': 'OR10K2', 'score': 0.31}]
chr1	GH01I158370	158370974	158371596	0.54	[{'connected_gene': 'OR10T2', 'score': 11.22}, {'connected_gene': 'CD1E', 'score': 6.51}]
chr1	GH01I158369	158369759	158370940	0.38	[{'connected_gene': 'OR10T2', 'score': 11.22}, {'connected_gene': 'CD1E', 'score': 0.37}]
chr1	GH01I158368	158368296	158369458	0.2	[{'connected_gene': 'OR10T2', 'score': 11.2}, {'connected_gene': 'CD1E', 'score': 0.37}]
chr1	GH01I158399	158399378	158399437	0.7	[{'connected_gene': 'OR10T2', 'score': 550.77}, {'connected_gene': 'CD1E', 'score': 0.25}]
chr1	GH01I158366	158366393	158367242	0.2	[{'connected_gene': 'OR10T2', 'score': 11.2}, {'connected_gene': 'OR10K2', 'score': 9.92}, {'connected_gene': 'OR10X1', 'score': 9.48}, {'connected_gene': 'CD1E', 'score': 0.39}]
chr1	GH01I158434	158434313	158437493	0.31	[{'connected_gene': 'OR10T2', 'score': 10.9}, {'connected_gene': 'OR10R2', 'score': 10.69}, {'connected_gene': 'OR6K2', 'score': 9.37}, {'connected_gene': 'OR10X1', 'score': 9.32}, {'connected_gene': 'CD1B', 'score': 7.14}, {'connected_gene': 'OR10K2', 'score': 0.44}, {'connected_gene': 'OR10T1P', 'score': 0.39}]
chr1	GH01I158493	158493046	158493397	0.26	[{'connected_gene': 'ENSG00000236656', 'score': 550.77}, {'connected_gene': 'CD1E', 'score': 15.21}, {'connected_gene': 'SPTA1', 'score': 7.05}, {'connected_gene': 'OR6N1', 'score': 5.51}, {'connected_gene': 'CD1B', 'score': 4.28}, {'connected_gene': 'OR10T2', 'score': 2.63}, {'connected_gene': 'OR10R3P', 'score': 0.77}]