PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000376971	[[23583046, 23584371], [23586246, 23586513]]	[[23584146, 23584371], [23586246, 23586501]]
NM_001008693	[[23583046, 23584371], [23586246, 23586610]]	[[23584146, 23584371], [23586246, 23586501]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr20	GH20I023404	23404304	23404513	0.62	[{'connected_gene': 'NXT1', 'score': 10.88}, {'connected_gene': 'ENSG00000234832', 'score': 10.88}, {'connected_gene': 'CST9', 'score': 9.74}, {'connected_gene': 'NAPB', 'score': 0.37}, {'connected_gene': 'RNA5SP479', 'score': 0.34}, {'connected_gene': 'GC20M023381', 'score': 0.34}]
chr20	GH20I023658	23658363	23662216	1.66	[{'connected_gene': 'NXT1', 'score': 22.53}, {'connected_gene': 'CST9', 'score': 12.52}, {'connected_gene': 'CSTL1', 'score': 11.17}, {'connected_gene': 'CST3', 'score': 6.77}, {'connected_gene': 'ENSG00000225056', 'score': 0.77}, {'connected_gene': 'GC20M023600', 'score': 0.44}, {'connected_gene': 'LOC105372573', 'score': 0.44}]
chr20	GH20I023401	23401019	23401616	0.31	[{'connected_gene': 'NAPB', 'score': 24.03}, {'connected_gene': 'ENSG00000234832', 'score': 10.89}, {'connected_gene': 'NXT1', 'score': 10.88}, {'connected_gene': 'CST9', 'score': 9.74}, {'connected_gene': 'RNA5SP479', 'score': 0.34}, {'connected_gene': 'GC20M023381', 'score': 0.34}]
chr20	GH20I023399	23399374	23400669	0.46	[{'connected_gene': 'NAPB', 'score': 17.65}, {'connected_gene': 'NXT1', 'score': 10.89}, {'connected_gene': 'ENSG00000234832', 'score': 10.89}, {'connected_gene': 'CST9', 'score': 9.74}, {'connected_gene': 'RNA5SP479', 'score': 0.37}, {'connected_gene': 'GC20M023381', 'score': 0.37}]
chr20	GH20I023407	23407713	23409394	0.63	[{'connected_gene': 'NAPB', 'score': 17.72}, {'connected_gene': 'CSTL1', 'score': 17.65}, {'connected_gene': 'NXT1', 'score': 10.95}, {'connected_gene': 'ENSG00000234832', 'score': 10.95}, {'connected_gene': 'CST9', 'score': 9.74}, {'connected_gene': 'RNA5SP479', 'score': 0.31}, {'connected_gene': 'GC20M023381', 'score': 0.31}]
chr20	GH20I023628	23628453	23630726	1.34	[{'connected_gene': 'CST3', 'score': 13.33}, {'connected_gene': 'CST9', 'score': 11.13}, {'connected_gene': 'GZF1', 'score': 4.99}, {'connected_gene': 'ENSG00000270001', 'score': 0.77}, {'connected_gene': 'GC20M023600', 'score': 0.28}]
chr20	GH20I023626	23625620	23626937	0.56	[{'connected_gene': 'CST3', 'score': 16.28}, {'connected_gene': 'ENSG00000270001', 'score': 0.44}, {'connected_gene': 'CST9', 'score': 0.34}, {'connected_gene': 'GC20M023600', 'score': 0.26}]
chr20	GH20I023622	23622038	23624658	1.03	[{'connected_gene': 'CST3', 'score': 16.62}, {'connected_gene': 'ENSG00000270001', 'score': 0.44}, {'connected_gene': 'CST9', 'score': 0.37}, {'connected_gene': 'GC20M023600', 'score': 0.25}]
chr20	GH20I023602	23602218	23602805	0.51	[{'connected_gene': 'CST3', 'score': 23.47}, {'connected_gene': 'CSTL1', 'score': 11.13}, {'connected_gene': 'NAPB', 'score': 10.41}, {'connected_gene': 'CST9', 'score': 0.77}, {'connected_gene': 'CST9LP2', 'score': 0.37}, {'connected_gene': 'GC20M023600', 'score': 0.2}]
chr20	GH20I023692	23692603	23693896	0.66	[{'connected_gene': 'CST9', 'score': 10.03}, {'connected_gene': 'CST1', 'score': 9.24}, {'connected_gene': 'CST3', 'score': 7.32}, {'connected_gene': 'CST4', 'score': 0.77}, {'connected_gene': 'CST2P1', 'score': 0.37}]
chr20	GH20I023533	23533202	23533788	0.43	[{'connected_gene': 'CST9', 'score': 10.44}, {'connected_gene': 'CSTL1', 'score': 10.33}, {'connected_gene': 'NAPB', 'score': 7.71}, {'connected_gene': 'CST13P', 'score': 0.39}, {'connected_gene': 'CST9LP1', 'score': 0.37}]
chr20	GH20I023605	23605907	23605966	0.5	[{'connected_gene': 'CST9', 'score': 550.77}, {'connected_gene': 'CST9LP2', 'score': 0.34}, {'connected_gene': 'GC20M023600', 'score': 0.21}]
chr20	GH20I023704	23704377	23704420	0.22	[{'connected_gene': 'CST9', 'score': 2.02}, {'connected_gene': 'CST2P1', 'score': 0.44}, {'connected_gene': 'CST4', 'score': 0.37}]
chr20	GH20I023606	23606664	23606813	0.8	[{'connected_gene': 'CST9', 'score': 550.77}, {'connected_gene': 'ENSG00000270001', 'score': 0.31}, {'connected_gene': 'GC20M023600', 'score': 0.21}]
chr20	GH20I023291	23291135	23291373	0.53	[{'connected_gene': 'CST9', 'score': 8.36}, {'connected_gene': 'ENSG00000277901', 'score': 0.29}, {'connected_gene': 'ENSG00000230387', 'score': 0.15}]
chr20	GH20I023585	23585791	23586519	0.83	[{'connected_gene': 'CST9LP1', 'score': 11.28}, {'connected_gene': 'CSTL1', 'score': 11.23}, {'connected_gene': 'NAPB', 'score': 7.07}, {'connected_gene': 'CST9LP2', 'score': 0.77}, {'connected_gene': 'CST9', 'score': 0.37}]
chr20	GH20I023416	23416104	23416213	0.52	[{'connected_gene': 'CSTL1', 'score': 11.16}, {'connected_gene': 'ENSG00000234832', 'score': 10.9}, {'connected_gene': 'NXT1', 'score': 10.9}, {'connected_gene': 'CST9', 'score': 9.73}, {'connected_gene': 'NAPB', 'score': 0.44}, {'connected_gene': 'RNA5SP479', 'score': 0.28}, {'connected_gene': 'GC20M023381', 'score': 0.28}]
chr20	GH20I023583	23583664	23583813	0.2	[{'connected_gene': 'CST9LP2', 'score': 550.77}, {'connected_gene': 'CST9', 'score': 11.71}, {'connected_gene': 'CST9LP1', 'score': 11.3}, {'connected_gene': 'CSTL1', 'score': 11.23}]
chr20	GH20I023655	23655401	23656800	0.79	[{'connected_gene': 'ENSG00000225056', 'score': 550.77}, {'connected_gene': 'CST9', 'score': 10.79}, {'connected_gene': 'CSTL1', 'score': 10.72}, {'connected_gene': 'NAPB', 'score': 10.53}, {'connected_gene': 'CST3', 'score': 9.07}, {'connected_gene': 'GC20M023600', 'score': 0.39}]
chr20	GH20I023625	23625324	23625473	0.38	[{'connected_gene': 'ENSG00000270001', 'score': 0.44}, {'connected_gene': 'CST9', 'score': 0.37}, {'connected_gene': 'GC20M023600', 'score': 0.26}]