PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000290868	[[126200123, 126201328], [126202211, 126202311], [126207040, 126207122], [126208118, 126208218], [126211260, 126211359], [126214880, 126214951], [126216893, 126217015], [126218179, 126218252], [126218899, 126218997], [126219537, 126219717], [126220060, 126220123], [126222837, 126222926], [126224543, 126224687], [126224787, 126224854], [126226584, 126226646], [126226809, 126226938], [126227258, 126227318], [126228427, 126228521], [126229506, 126229637], [126236436, 126236616]]	[[126201187, 126201328], [126202211, 126202311], [126207040, 126207122], [126208118, 126208218], [126211260, 126211359], [126214880, 126214951], [126216893, 126217015], [126218179, 126218252], [126218899, 126218997], [126219537, 126219717], [126220060, 126220123], [126222837, 126222926], [126224543, 126224687], [126224787, 126224854], [126226584, 126226646], [126226809, 126226938], [126227258, 126227318], [126228427, 126228521], [126229506, 126229637], [126236436, 126236562]]
ENST00000383579	[[126200697, 126201328], [126202211, 126202311], [126207040, 126207122], [126208118, 126208218], [126211260, 126211359], [126214880, 126214951], [126216893, 126217015], [126218179, 126218252], [126218899, 126218997], [126219537, 126219717], [126220060, 126220155], [126220643, 126220791], [126222837, 126222926], [126224543, 126224687], [126224787, 126224854], [126226584, 126226646], [126226809, 126226938], [126227258, 126227318], [126228427, 126228521], [126229506, 126229637], [126236436, 126236596]]	[[126201187, 126201328], [126202211, 126202311], [126207040, 126207122], [126208118, 126208218], [126211260, 126211359], [126214880, 126214951], [126216893, 126217015], [126218179, 126218252], [126218899, 126218997], [126219537, 126219717], [126220060, 126220155], [126220643, 126220791], [126222837, 126222926], [126224543, 126224687], [126224787, 126224854], [126226584, 126226646], [126226809, 126226938], [126227258, 126227318], [126228427, 126228521], [126229506, 126229637], [126236436, 126236562]]
NM_001165974	[[126200007, 126201328], [126202211, 126202311], [126207040, 126207122], [126208118, 126208218], [126211260, 126211359], [126214880, 126214951], [126216893, 126217015], [126218179, 126218252], [126218899, 126218997], [126219537, 126219717], [126220060, 126220155], [126220643, 126220791], [126222837, 126222926], [126224543, 126224687], [126224787, 126224854], [126226584, 126226646], [126226809, 126226938], [126227258, 126227318], [126228427, 126228521], [126229506, 126229637], [126236436, 126236616]]	[[126201187, 126201328], [126202211, 126202311], [126207040, 126207122], [126208118, 126208218], [126211260, 126211359], [126214880, 126214951], [126216893, 126217015], [126218179, 126218252], [126218899, 126218997], [126219537, 126219717], [126220060, 126220155], [126220643, 126220791], [126222837, 126222926], [126224543, 126224687], [126224787, 126224854], [126226584, 126226646], [126226809, 126226938], [126227258, 126227318], [126228427, 126228521], [126229506, 126229637], [126236436, 126236562]]
NM_144639	[[126200007, 126201328], [126202211, 126202311], [126207040, 126207122], [126208118, 126208218], [126211260, 126211359], [126214880, 126214951], [126216893, 126217015], [126218179, 126218252], [126218899, 126218997], [126219537, 126219717], [126220060, 126220123], [126222837, 126222926], [126224543, 126224687], [126224787, 126224854], [126226584, 126226646], [126226809, 126226938], [126227258, 126227318], [126228427, 126228521], [126229506, 126229637], [126236436, 126236616]]	[[126201187, 126201328], [126202211, 126202311], [126207040, 126207122], [126208118, 126208218], [126211260, 126211359], [126214880, 126214951], [126216893, 126217015], [126218179, 126218252], [126218899, 126218997], [126219537, 126219717], [126220060, 126220123], [126222837, 126222926], [126224543, 126224687], [126224787, 126224854], [126226584, 126226646], [126226809, 126226938], [126227258, 126227318], [126228427, 126228521], [126229506, 126229637], [126236436, 126236562]]

Promoter

Chrom	Start	End	Description
chr3	126236588	126236601	CAGE_peak_1_at_UROC1_5end
chr3	126236605	126236621	CAGE_peak_2_at_UROC1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I126493	126493980	126495149	0.31	[{'connected_gene': 'ZXDC', 'score': 10.52}, {'connected_gene': 'CHST13', 'score': 5.37}, {'connected_gene': 'UROC1', 'score': 0.34}]
chr3	GH03I126481	126481938	126482087	0.64	[{'connected_gene': 'ZXDC', 'score': 0.44}, {'connected_gene': 'UROC1', 'score': 0.28}]
chr3	GH03I126486	126486802	126487972	0.8	[{'connected_gene': 'ZXDC', 'score': 14.68}, {'connected_gene': 'UROC1', 'score': 0.29}]
chr3	GH03I126353	126353025	126358521	2.68	[{'connected_gene': 'KLF15', 'score': 566.7}, {'connected_gene': 'LOC101927056', 'score': 13.88}, {'connected_gene': 'ALDH1L1', 'score': 6.58}, {'connected_gene': 'OR7E29P', 'score': 5.38}, {'connected_gene': 'CFAP100', 'score': 1.64}, {'connected_gene': 'UROC1', 'score': 1.5}, {'connected_gene': 'LOC105374088', 'score': 0.26}]
chr3	GH03I126522	126522840	126531392	2.62	[{'connected_gene': 'CHST13', 'score': 609.65}, {'connected_gene': 'TXNRD3NB', 'score': 11.52}, {'connected_gene': 'TXNRD3', 'score': 11.48}, {'connected_gene': 'NUP210P1', 'score': 10.9}, {'connected_gene': 'OR7E29P', 'score': 5.22}, {'connected_gene': 'C3orf22', 'score': 4.5}, {'connected_gene': 'ZXDC', 'score': 1.83}, {'connected_gene': 'UROC1', 'score': 1.75}]
chr3	GH03I126523	126522021	126522800	1.11	[{'connected_gene': 'CHST13', 'score': 550.77}, {'connected_gene': 'UROC1', 'score': 0.77}, {'connected_gene': 'C3orf22', 'score': 0.28}]
chr3	GH03I126517	126517743	126517802	1.13	[{'connected_gene': 'UROC1', 'score': 550.77}, {'connected_gene': 'CHST13', 'score': 0.44}]
chr3	GH03I126459	126459738	126460947	0.2	[{'connected_gene': 'PIR31332', 'score': 550.77}, {'connected_gene': 'ZXDC', 'score': 18.01}, {'connected_gene': 'UROC1', 'score': 11.26}, {'connected_gene': 'CHST13', 'score': 11.24}, {'connected_gene': 'GC03M126451', 'score': 0.44}]
chr3	GH03I126461	126461004	126463317	0.2	[{'connected_gene': 'PIR31332', 'score': 550.77}, {'connected_gene': 'ZXDC', 'score': 21.7}, {'connected_gene': 'UROC1', 'score': 11.26}, {'connected_gene': 'CHST13', 'score': 11.24}]