PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000537561	[[131100514, 131100589], [131100889, 131101159], [131102005, 131102116], [131102187, 131107674]]	[[131100889, 131101159], [131102005, 131102116], [131102187, 131102286]]
ENST00000359850	[[131100608, 131100786], [131100889, 131101159], [131102005, 131107674]]	[[131100747, 131100786], [131100889, 131101159], [131102005, 131102185]]
ENST00000521288	[[131100617, 131100786], [131100889, 131101159], [131102005, 131107674]]	[[131100648, 131100786], [131100889, 131101159], [131102005, 131102185]]
ENST00000502852	[[131100628, 131100786], [131100889, 131102283]]	[[131100648, 131100786], [131100889, 131101435]]
NM_001171905	[[131100514, 131100589], [131100889, 131101159], [131102005, 131102116], [131102187, 131107674]]	[[131100889, 131101159], [131102005, 131102116], [131102187, 131102286]]
NM_001171906	[[131100608, 131100786], [131100889, 131101641]]	[[131100648, 131100786], [131100889, 131101435]]
NM_152395	[[131100608, 131100786], [131100889, 131101159], [131102005, 131107674]]	[[131100648, 131100786], [131100889, 131101159], [131102005, 131102185]]
NR_033268	[[131100624, 131101159], [131102005, 131107674]]	None

Promoter

Chrom	Start	End	Description
chr3	131100600	131100654	CAGE_peak_1_at_NUDT16_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I131371	131371201	131372199	0.82	[{'connected_gene': 'SNORA58', 'score': 9.72}, {'connected_gene': 'NEK11', 'score': 7.02}, {'connected_gene': 'NUDT16', 'score': 6.68}, {'connected_gene': 'NUDT16P1', 'score': 0.44}, {'connected_gene': 'LOC339874', 'score': 0.44}]
chr3	GH03I131355	131355785	131356847	0.2	[{'connected_gene': 'NUDT16P1', 'score': 7.52}, {'connected_gene': 'NUDT16', 'score': 5.81}, {'connected_gene': 'GC03P131359', 'score': 0.77}, {'connected_gene': 'LOC339874', 'score': 0.31}, {'connected_gene': 'RNU6-726P', 'score': 0.07}, {'connected_gene': 'GC03M131093', 'score': 0.07}]
chr3	GH03I131215	131215973	131218885	0.98	[{'connected_gene': 'NUDT16P1', 'score': 7.39}, {'connected_gene': 'NUDT16', 'score': 4.61}, {'connected_gene': 'RNU6-726P', 'score': 0.13}, {'connected_gene': 'GC03M131093', 'score': 0.13}, {'connected_gene': 'GC03P131359', 'score': 0.11}, {'connected_gene': 'NEK11', 'score': 0.08}]
chr3	GH03I131380	131380240	131382801	2.16	[{'connected_gene': 'NUDT16', 'score': 557.4}, {'connected_gene': 'LOC339874', 'score': 550.77}, {'connected_gene': 'PIK3R4', 'score': 20.43}, {'connected_gene': 'ATP2C1', 'score': 11.33}, {'connected_gene': 'MRPL3', 'score': 10.27}, {'connected_gene': 'ASTE1', 'score': 10.1}]
chr3	GH03I131349	131349507	131350856	0.82	[{'connected_gene': 'NUDT16', 'score': 11.41}, {'connected_gene': 'LOC339874', 'score': 11.41}, {'connected_gene': 'GC03P131359', 'score': 0.44}, {'connected_gene': 'RNU6-726P', 'score': 0.07}, {'connected_gene': 'GC03M131093', 'score': 0.07}, {'connected_gene': 'NEK11', 'score': 0.05}]
chr3	GH03I131385	131385090	131388815	1	[{'connected_gene': 'GC03P131387', 'score': 550.77}, {'connected_gene': 'NUDT16', 'score': 5.5}]