PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000360096	[[57371508, 57371675], [57377350, 57377513], [57384843, 57385019], [57389862, 57390614]]	[[57377497, 57377513], [57384843, 57385019], [57389862, 57390042]]
NM_206919	[[57371374, 57371675], [57377350, 57377513], [57384843, 57385019], [57389862, 57390058]]	[[57377497, 57377513], [57384843, 57385019], [57389862, 57390042]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I056465	56465006	56469294	2.23	[{'connected_gene': 'SRP72', 'score': 596.62}, {'connected_gene': 'GC04M056462', 'score': 550.77}, {'connected_gene': 'AASDH', 'score': 13.2}, {'connected_gene': 'PPAT', 'score': 11.91}, {'connected_gene': 'PAICS', 'score': 11.91}, {'connected_gene': 'SPINK2', 'score': 10.02}, {'connected_gene': 'ENSG00000251799', 'score': 10.02}, {'connected_gene': 'ARL9', 'score': 8.07}]
chr4	GH04I056544	56544175	56545414	1.21	[{'connected_gene': 'SPINK2', 'score': 10.84}, {'connected_gene': 'ENSG00000251799', 'score': 10.84}, {'connected_gene': 'AASDH', 'score': 10.1}, {'connected_gene': 'ARL9', 'score': 5.8}, {'connected_gene': 'THEGL', 'score': 0.39}, {'connected_gene': 'GLDCP1', 'score': 0.25}]
chr4	GH04I056504	56504855	56506564	1.56	[{'connected_gene': 'ARL9', 'score': 558.58}, {'connected_gene': 'SRP72', 'score': 42.54}, {'connected_gene': 'AASDH', 'score': 4.73}, {'connected_gene': 'LOC105377665', 'score': 0.34}]
chr4	GH04I056540	56540801	56541000	0.38	[{'connected_gene': 'ARL9', 'score': 12.28}, {'connected_gene': 'SRP72', 'score': 12.19}, {'connected_gene': 'PAICS', 'score': 11.04}, {'connected_gene': 'PPAT', 'score': 11.04}, {'connected_gene': 'SPINK2', 'score': 10.4}, {'connected_gene': 'ENSG00000251799', 'score': 10.4}, {'connected_gene': 'HOPX', 'score': 10.25}, {'connected_gene': 'AASDH', 'score': 10.06}, {'connected_gene': 'THEGL', 'score': 0.39}, {'connected_gene': 'GLDCP1', 'score': 0.23}]
chr4	GH04I056459	56459545	56461102	0.64	[{'connected_gene': 'ARL9', 'score': 20.07}, {'connected_gene': 'SRP72', 'score': 13.45}, {'connected_gene': 'PAICS', 'score': 12.18}, {'connected_gene': 'PPAT', 'score': 12.18}, {'connected_gene': 'AASDH', 'score': 10.29}, {'connected_gene': 'ENSG00000251799', 'score': 10.02}, {'connected_gene': 'SPINK2', 'score': 10.02}, {'connected_gene': 'GC04P056465', 'score': 0.77}, {'connected_gene': 'GC04P056437', 'score': 0.34}, {'connected_gene': 'GC04P056436', 'score': 0.34}]
chr4	GH04I056172	56172026	56172037	0.4	[{'connected_gene': 'ARL9', 'score': 1.79}, {'connected_gene': 'RNA5SP161', 'score': 0.19}, {'connected_gene': 'LOC101928760', 'score': 0.19}, {'connected_gene': 'KIAA1211', 'score': 0.13}, {'connected_gene': 'GC04P056007', 'score': 0.1}]
chr4	GH04I056515	56515314	56515318	0.22	[{'connected_gene': 'ARL9', 'score': 2.5}, {'connected_gene': 'LOC105377665', 'score': 0.37}]
chr4	GH04I056286	56286729	56286789	0.22	[{'connected_gene': 'RNU6-197P', 'score': 550.77}, {'connected_gene': 'KIAA1211', 'score': 2.96}, {'connected_gene': 'ARL9', 'score': 2.11}, {'connected_gene': 'LOC101928760', 'score': 0.26}]
chr4	GH04I056433	56433450	56438274	2.1	[{'connected_gene': 'PAICS', 'score': 550.77}, {'connected_gene': 'GC04P056437', 'score': 550.77}, {'connected_gene': 'GC04P056436', 'score': 550.77}, {'connected_gene': 'PPAT', 'score': 550.77}, {'connected_gene': 'SRP72', 'score': 50.26}, {'connected_gene': 'CEP135', 'score': 35.93}, {'connected_gene': 'AASDH', 'score': 33.8}, {'connected_gene': 'POLR2B', 'score': 32.68}, {'connected_gene': 'RN7SKP30', 'score': 31.62}, {'connected_gene': 'ENSG00000269921', 'score': 14.66}, {'connected_gene': 'ARL9', 'score': 7.67}]
chr4	GH04I056530	56530001	56531359	1.84	[{'connected_gene': 'THEGL', 'score': 567.59}, {'connected_gene': 'LOC105377665', 'score': 550.77}, {'connected_gene': 'SRP72', 'score': 22.14}, {'connected_gene': 'ARL9', 'score': 19.08}, {'connected_gene': 'ENSG00000251799', 'score': 10.66}, {'connected_gene': 'SPINK2', 'score': 10.66}, {'connected_gene': 'GLDCP1', 'score': 0.21}]
chr4	GH04I056531	56531515	56531664	0.38	[{'connected_gene': 'THEGL', 'score': 550.77}, {'connected_gene': 'LOC105377665', 'score': 550.77}, {'connected_gene': 'ARL9', 'score': 12.73}, {'connected_gene': 'SRP72', 'score': 12.63}, {'connected_gene': 'ENSG00000251799', 'score': 10.66}, {'connected_gene': 'SPINK2', 'score': 10.66}, {'connected_gene': 'GLDCP1', 'score': 0.21}]