PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000468640	[[71276619, 71276707], [71277118, 71277362]]	None
ENST00000370474	[[71276619, 71276707], [71289116, 71289269], [71298317, 71299272]]	[[71276643, 71276707], [71289116, 71289269], [71298317, 71298427]]
NM_145267	[[71276624, 71276707], [71289116, 71289269], [71298317, 71298606]]	[[71276643, 71276707], [71289116, 71289269], [71298317, 71298427]]

Promoter

Chrom	Start	End	Description
chr6	71276596	71276649	CAGE_peak_1_at_C6orf57_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I070666	70666786	70669748	2.01	[{'connected_gene': 'SMAP1', 'score': 561.5}, {'connected_gene': 'SDHAF4', 'score': 11.07}, {'connected_gene': 'B3GAT2', 'score': 6.75}, {'connected_gene': 'GC06M070679', 'score': 0.34}]
chr6	GH06I070566	70566243	70567801	2.01	[{'connected_gene': 'SDHAF4', 'score': 550.77}, {'connected_gene': 'EVADR', 'score': 9.07}, {'connected_gene': 'ENSG00000271967', 'score': 0.31}]
chr6	GH06I071028	71028134	71028856	0.56	[{'connected_gene': 'SDHAF4', 'score': 4.23}, {'connected_gene': 'BECN1P2', 'score': 0.25}, {'connected_gene': 'B3GAT2', 'score': 0.19}]
chr6	GH06I070410	70410960	70416292	2.26	[{'connected_gene': 'LOC105377849', 'score': 550.77}, {'connected_gene': 'FAM135A', 'score': 550.77}, {'connected_gene': 'EVADR', 'score': 12.73}, {'connected_gene': 'SDHAF4', 'score': 8.35}, {'connected_gene': 'GC06P070410', 'score': 0.77}]
chr6	GH06I070378	70378480	70381302	0.76	[{'connected_gene': 'LOC105377848', 'score': 550.77}, {'connected_gene': 'SDHAF4', 'score': 11.83}, {'connected_gene': 'EVADR', 'score': 4.82}, {'connected_gene': 'GC06P070315', 'score': 0.21}]
chr6	GH06I070506	70506230	70509085	0.31	[{'connected_gene': 'EVADR', 'score': 9.71}, {'connected_gene': 'SDHAF4', 'score': 8.46}, {'connected_gene': 'GC06P070515', 'score': 0.77}, {'connected_gene': 'LOC105377849', 'score': 0.16}, {'connected_gene': 'FAM135A', 'score': 0.16}]
chr6	GH06I070390	70390254	70400890	1.44	[{'connected_gene': 'EVADR', 'score': 565.04}, {'connected_gene': 'SDHAF4', 'score': 5.83}, {'connected_gene': 'GC06M070386', 'score': 0.77}, {'connected_gene': 'LOC105377847', 'score': 0.77}]