PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000529246	[[49518112, 49519808]]	[[49518505, 49519240]]
ENST00000414696	[[49518378, 49519388], [49522589, 49522870], [49528246, 49528647]]	[[49518505, 49519240]]
ENST00000371194	[[49518387, 49519388], [49520180, 49520283], [49520689, 49520920], [49522589, 49522870], [49529416, 49529620]]	[[49518505, 49519240]]
ENST00000424426	[[49518738, 49519003], [49519593, 49519770]]	None
ENST00000415078	[[49519022, 49519388], [49519593, 49519812]]	[[49519022, 49519240]]
ENST00000526429	[[49520065, 49520283], [49522589, 49523021]]	None
ENST00000530382	[[49520070, 49520283], [49520689, 49520920], [49522589, 49522773]]	None
NM_001145652	[[49518112, 49519808]]	[[49518505, 49519240]]

Promoter

Chrom	Start	End	Description
chr6	49518363	49518426	CAGE_peak_1_at_C6orf141_5end
chr6	49518466	49518478	CAGE_peak_3_at_C6orf141_5end
chr6	49519017	49519042	CAGE_peak_4_at_C6orf141_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I049645	49645230	49648676	1.22	[{'connected_gene': 'RHAG', 'score': 20.38}, {'connected_gene': 'LOC101927020', 'score': 10.5}, {'connected_gene': 'LOC101927048', 'score': 10.5}, {'connected_gene': 'CRISP3', 'score': 10.37}, {'connected_gene': 'C6orf141', 'score': 8.13}, {'connected_gene': 'CENPQ', 'score': 2.19}, {'connected_gene': 'CRISP2', 'score': 0.2}]
chr6	GH06I049555	49555607	49557565	1.38	[{'connected_gene': 'CENPQ', 'score': 12.81}, {'connected_gene': 'PGK2', 'score': 9.9}, {'connected_gene': 'LOC101927020', 'score': 9.35}, {'connected_gene': 'LOC101927048', 'score': 9.35}, {'connected_gene': 'MUT', 'score': 7.51}, {'connected_gene': 'C6orf141', 'score': 0.44}, {'connected_gene': 'CYP2AC1P', 'score': 0.34}]
chr6	GH06I049569	49569911	49571127	0.6	[{'connected_gene': 'C6orf141', 'score': 17.31}, {'connected_gene': 'CENPQ', 'score': 6.82}, {'connected_gene': 'LOC101927020', 'score': 4.87}, {'connected_gene': 'CYP2AC1P', 'score': 0.44}]
chr6	GH06I049564	49564886	49567269	0.88	[{'connected_gene': 'C6orf141', 'score': 11.17}, {'connected_gene': 'CENPQ', 'score': 9.19}, {'connected_gene': 'LOC101927020', 'score': 4.62}, {'connected_gene': 'CYP2AC1P', 'score': 0.39}]
chr6	GH06I049549	49549688	49555452	2.34	[{'connected_gene': 'C6orf141', 'score': 550.77}, {'connected_gene': 'MUT', 'score': 7.65}, {'connected_gene': 'CENPQ', 'score': 6.7}, {'connected_gene': 'CYP2AC1P', 'score': 0.31}]
chr6	GH06I049666	49666916	49667797	0.86	[{'connected_gene': 'CRISP3', 'score': 11.24}, {'connected_gene': 'PGK2', 'score': 10.9}, {'connected_gene': 'C6orf141', 'score': 8.13}, {'connected_gene': 'RHAG', 'score': 0.29}, {'connected_gene': 'CRISP2', 'score': 0.25}]
chr6	GH06I049669	49668328	49668477	0.74	[{'connected_gene': 'CRISP3', 'score': 11.24}, {'connected_gene': 'PGK2', 'score': 10.9}, {'connected_gene': 'C6orf141', 'score': 8.13}, {'connected_gene': 'RHAG', 'score': 0.29}, {'connected_gene': 'CRISP2', 'score': 0.25}]
chr6	GH06I049766	49766455	49770933	0.9	[{'connected_gene': 'LOC101927020', 'score': 19.9}, {'connected_gene': 'CRISP3', 'score': 11.78}, {'connected_gene': 'LOC101927048', 'score': 11.24}, {'connected_gene': 'MUT', 'score': 5.36}, {'connected_gene': 'CRISP2', 'score': 4.97}, {'connected_gene': 'C6orf141', 'score': 4.86}, {'connected_gene': 'PGK2', 'score': 0.37}]
chr6	GH06I049540	49540534	49542717	1.42	[{'connected_gene': 'GC06M049537', 'score': 0.44}, {'connected_gene': 'C6orf141', 'score': 0.44}]