PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000304222	[[15848230, 15848897], [15877992, 15879060]]	[[15848562, 15848897], [15877992, 15878656]]
ENST00000582124	[[15877176, 15879051]]	None
NM_000676	[[15848230, 15848897], [15877992, 15879210]]	[[15848562, 15848897], [15877992, 15878656]]

Promoter

Chrom	Start	End	Description
chr17	15848414	15848452	CAGE_peak_2_at_ADORA2B_5end
chr17	15848544	15848624	CAGE_peak_1_at_ADORA2B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I015968	15968300	15969095	0.49	[{'connected_gene': 'TTC19', 'score': 6.78}, {'connected_gene': 'PIR48319', 'score': 0.39}, {'connected_gene': 'ADORA2B', 'score': 0.26}]
chr17	GH17I016414	16414853	16421125	2.21	[{'connected_gene': 'TRPV2', 'score': 578.2}, {'connected_gene': 'ENSG00000264739', 'score': 550.77}, {'connected_gene': 'ZSWIM7', 'score': 10.79}, {'connected_gene': 'NCOR1', 'score': 10.7}, {'connected_gene': 'FLCN', 'score': 9.92}, {'connected_gene': 'ADORA2B', 'score': 6.39}, {'connected_gene': 'CENPV', 'score': 6.08}, {'connected_gene': 'PIGL', 'score': 5.74}, {'connected_gene': 'CDRT1', 'score': 5.21}, {'connected_gene': 'ENSG00000239203', 'score': 0.44}]
chr17	GH17I016105	16105757	16106907	0.57	[{'connected_gene': 'ADORA2B', 'score': 7.95}, {'connected_gene': 'PIGL', 'score': 6.48}, {'connected_gene': 'CDRT4', 'score': 5.38}, {'connected_gene': 'RNU6-314P', 'score': 0.44}, {'connected_gene': 'RNU6-862P', 'score': 0.29}, {'connected_gene': 'GC17M016137', 'score': 0.29}, {'connected_gene': 'NCOR1', 'score': 0.14}]
chr17	GH17I015892	15892190	15893709	0.91	[{'connected_gene': 'ADORA2B', 'score': 27.47}, {'connected_gene': 'TTC19', 'score': 11.63}, {'connected_gene': 'ZSWIM7', 'score': 11.63}, {'connected_gene': 'MEIS3P1', 'score': 11.15}, {'connected_gene': 'GC17P015909', 'score': 0.37}, {'connected_gene': 'GC17P015908', 'score': 0.37}, {'connected_gene': 'GC17P015867', 'score': 0.31}, {'connected_gene': 'LOC100418862', 'score': 0.21}]
chr17	GH17I015927	15927925	15929000	0.84	[{'connected_gene': 'ADORA2B', 'score': 550.77}, {'connected_gene': 'TTC19', 'score': 11.34}, {'connected_gene': 'ENSG00000265519', 'score': 8.95}, {'connected_gene': 'GC17P015935', 'score': 0.44}]
chr17	GH17I015883	15883600	15884239	1.24	[{'connected_gene': 'ADORA2B', 'score': 15.65}, {'connected_gene': 'MEIS3P1', 'score': 11.4}, {'connected_gene': 'ZSWIM7', 'score': 1.97}, {'connected_gene': 'TTC19', 'score': 1.77}, {'connected_gene': 'GC17P015867', 'score': 0.37}, {'connected_gene': 'GC17P015909', 'score': 0.34}, {'connected_gene': 'GC17P015908', 'score': 0.34}, {'connected_gene': 'LOC100418862', 'score': 0.23}]
chr17	GH17I015944	15944350	15948919	2.51	[{'connected_gene': 'ADORA2B', 'score': 551.85}, {'connected_gene': 'ZSWIM7', 'score': 20.19}, {'connected_gene': 'TTC19', 'score': 13.34}, {'connected_gene': 'PIGL', 'score': 5.36}, {'connected_gene': 'MEIS3P1', 'score': 5.05}, {'connected_gene': 'GC17P015935', 'score': 0.39}, {'connected_gene': 'PIR48319', 'score': 0.39}]
chr17	GH17I015919	15919571	15922279	1.1	[{'connected_gene': 'ADORA2B', 'score': 12.57}, {'connected_gene': 'ENSG00000265519', 'score': 11.52}, {'connected_gene': 'ZSWIM7', 'score': 11.38}, {'connected_gene': 'TTC19', 'score': 11.38}, {'connected_gene': 'MEIS3P1', 'score': 5.66}, {'connected_gene': 'GC17P015908', 'score': 0.39}, {'connected_gene': 'GC17P015909', 'score': 0.39}]
chr17	GH17I015913	15913886	15915436	0.94	[{'connected_gene': 'ADORA2B', 'score': 16.14}, {'connected_gene': 'ZSWIM7', 'score': 13.06}, {'connected_gene': 'TTC19', 'score': 12.88}, {'connected_gene': 'GC17P015908', 'score': 0.44}, {'connected_gene': 'GC17P015909', 'score': 0.44}]
chr17	GH17I015897	15897443	15898235	0.51	[{'connected_gene': 'ADORA2B', 'score': 15.88}, {'connected_gene': 'GC17P015908', 'score': 0.39}, {'connected_gene': 'GC17P015909', 'score': 0.39}, {'connected_gene': 'GC17P015867', 'score': 0.29}, {'connected_gene': 'LOC100418862', 'score': 0.2}]
chr17	GH17I015884	15882207	15882356	0.54	[{'connected_gene': 'ADORA2B', 'score': 15.95}, {'connected_gene': 'GC17P015867', 'score': 0.37}, {'connected_gene': 'GC17P015908', 'score': 0.31}, {'connected_gene': 'GC17P015909', 'score': 0.31}, {'connected_gene': 'LOC100418862', 'score': 0.23}]
chr17	GH17I015943	15942273	15943000	0.46	[{'connected_gene': 'ADORA2B', 'score': 6.51}, {'connected_gene': 'GC17P015935', 'score': 0.44}, {'connected_gene': 'PIR48319', 'score': 0.39}]
chr17	GH17I015951	15951308	15952173	0.49	[{'connected_gene': 'ZSWIM7', 'score': 17.32}, {'connected_gene': 'TTC19', 'score': 11.88}, {'connected_gene': 'PIGL', 'score': 6.58}, {'connected_gene': 'PIR48319', 'score': 0.44}, {'connected_gene': 'GC17P015935', 'score': 0.37}, {'connected_gene': 'ADORA2B', 'score': 0.34}]
chr17	GH17I015949	15949749	15950795	0.38	[{'connected_gene': 'ZSWIM7', 'score': 12.03}, {'connected_gene': 'TTC19', 'score': 12.03}, {'connected_gene': 'MEIS3P1', 'score': 5.02}, {'connected_gene': 'PIR48319', 'score': 0.44}, {'connected_gene': 'GC17P015935', 'score': 0.39}, {'connected_gene': 'ADORA2B', 'score': 0.34}]
chr17	GH17I015952	15952483	15955574	0.99	[{'connected_gene': 'ZSWIM7', 'score': 11.88}, {'connected_gene': 'TTC19', 'score': 11.88}, {'connected_gene': 'ENSG00000265519', 'score': 7.56}, {'connected_gene': 'ADORA2B', 'score': 7.09}, {'connected_gene': 'MEIS3P1', 'score': 6.43}, {'connected_gene': 'PIGL', 'score': 4.64}, {'connected_gene': 'PIR48319', 'score': 0.77}, {'connected_gene': 'GC17P015935', 'score': 0.37}]
chr17	GH17I015972	15972860	15973575	0.72	[{'connected_gene': 'ZSWIM7', 'score': 65.36}, {'connected_gene': 'PIR48319', 'score': 0.37}, {'connected_gene': 'TTC19', 'score': 0.31}, {'connected_gene': 'ADORA2B', 'score': 0.25}]
chr17	GH17I015910	15910907	15911056	0.31	[{'connected_gene': 'ZSWIM7', 'score': 11.62}, {'connected_gene': 'TTC19', 'score': 11.62}, {'connected_gene': 'GC17P015908', 'score': 0.77}, {'connected_gene': 'GC17P015909', 'score': 0.77}, {'connected_gene': 'ADORA2B', 'score': 0.37}]
chr17	GH17I015970	15970557	15971950	0.49	[{'connected_gene': 'ZSWIM7', 'score': 50.26}, {'connected_gene': 'TTC19', 'score': 6.95}, {'connected_gene': 'PIR48319', 'score': 0.39}, {'connected_gene': 'ADORA2B', 'score': 0.26}]
chr17	GH17I015961	15961095	15961806	0.4	[{'connected_gene': 'ZSWIM7', 'score': 12.57}, {'connected_gene': 'TTC19', 'score': 12.57}, {'connected_gene': 'RNU6-314P', 'score': 9.63}, {'connected_gene': 'NCOR1', 'score': 9.58}, {'connected_gene': 'PIR48319', 'score': 0.77}, {'connected_gene': 'ADORA2B', 'score': 0.29}]
chr17	GH17I016293	16293549	16301054	1.15	[{'connected_gene': 'ZSWIM7', 'score': 28.31}, {'connected_gene': 'CENPV', 'score': 21.95}, {'connected_gene': 'PIGL', 'score': 12.7}, {'connected_gene': 'NCOR1', 'score': 10.55}, {'connected_gene': 'RNU6-314P', 'score': 10.36}, {'connected_gene': 'LRRC75A', 'score': 10.16}, {'connected_gene': 'ADORA2B', 'score': 8.13}, {'connected_gene': 'TTC19', 'score': 5.67}, {'connected_gene': 'MIR1288', 'score': 0.37}, {'connected_gene': 'GC17M016316', 'score': 0.34}]
chr17	GH17I015962	15962301	15968058	1.49	[{'connected_gene': 'ZSWIM7', 'score': 70.99}, {'connected_gene': 'ADORA2B', 'score': 45.01}, {'connected_gene': 'TTC19', 'score': 19.36}, {'connected_gene': 'RNU6-314P', 'score': 9.63}, {'connected_gene': 'NCOR1', 'score': 9.58}, {'connected_gene': 'CDRT1', 'score': 7.06}, {'connected_gene': 'PIR48319', 'score': 0.44}]
chr17	GH17I015882	15882447	15882623	0.74	[{'connected_gene': 'ZSWIM7', 'score': 1.73}, {'connected_gene': 'ADORA2B', 'score': 1.71}, {'connected_gene': 'TTC19', 'score': 1.38}, {'connected_gene': 'GC17P015867', 'score': 0.37}, {'connected_gene': 'GC17P015908', 'score': 0.31}, {'connected_gene': 'GC17P015909', 'score': 0.31}, {'connected_gene': 'LOC100418862', 'score': 0.23}]
chr17	GH17I015980	15980388	15983080	1.25	[{'connected_gene': 'ZSWIM7', 'score': 66.09}, {'connected_gene': 'ADORA2B', 'score': 12.61}, {'connected_gene': 'TTC19', 'score': 6.64}, {'connected_gene': 'PIR48319', 'score': 0.34}]
chr17	GH17I016002	16002622	16003409	0.2	[{'connected_gene': 'ZSWIM7', 'score': 42.14}, {'connected_gene': 'ADORA2B', 'score': 11.56}, {'connected_gene': 'ENSG00000227782', 'score': 10.9}, {'connected_gene': 'RPLP1P11', 'score': 10.89}, {'connected_gene': 'RNU6-314P', 'score': 10.45}, {'connected_gene': 'NCOR1', 'score': 10.38}, {'connected_gene': 'RNU6-862P', 'score': 10.27}, {'connected_gene': 'TTC19', 'score': 7.19}, {'connected_gene': 'GC17M016015', 'score': 0.39}]
chr17	GH17I016231	16231325	16233851	0.51	[{'connected_gene': 'ZSWIM7', 'score': 37.07}, {'connected_gene': 'MIR1288', 'score': 11.61}, {'connected_gene': 'ADORA2B', 'score': 6.06}, {'connected_gene': 'NCOR1', 'score': 0.39}, {'connected_gene': 'PIGL', 'score': 0.37}, {'connected_gene': 'GC17M016250', 'score': 0.37}]
chr17	GH17I016909	16909360	16912731	0.4	[{'connected_gene': 'LINC02090', 'score': 12.44}, {'connected_gene': 'TBC1D27P', 'score': 8.42}, {'connected_gene': 'KRT17P4', 'score': 7.85}, {'connected_gene': 'ADORA2B', 'score': 4.4}, {'connected_gene': 'ENSG00000265853', 'score': 0.37}]
chr17	GH17I015847	15847115	15848619	0.63	[{'connected_gene': 'LOC105371557', 'score': 550.77}, {'connected_gene': 'ADORA2B', 'score': 14.87}, {'connected_gene': 'ENSG00000265519', 'score': 14.34}, {'connected_gene': 'LOC100418862', 'score': 0.37}]
chr17	GH17I015828	15828630	15829200	0.79	[{'connected_gene': 'LOC100418862', 'score': 550.77}, {'connected_gene': 'ZSWIM7', 'score': 12.53}, {'connected_gene': 'TTC19', 'score': 12.53}, {'connected_gene': 'ADORA2B', 'score': 11.99}, {'connected_gene': 'LINC02087', 'score': 0.39}]
chr17	GH17I015832	15832868	15833896	0.2	[{'connected_gene': 'ENSG00000265519', 'score': 19.77}, {'connected_gene': 'MEIS3P1', 'score': 14.88}, {'connected_gene': 'ZSWIM7', 'score': 12.54}, {'connected_gene': 'TTC19', 'score': 12.54}, {'connected_gene': 'ADORA2B', 'score': 11.99}, {'connected_gene': 'LOC100418862', 'score': 0.77}, {'connected_gene': 'LOC105371557', 'score': 0.39}]
chr17	GH17I015942	15942001	15942200	0.49	[{'connected_gene': 'GC17P015935', 'score': 0.44}, {'connected_gene': 'PIR48319', 'score': 0.39}, {'connected_gene': 'ADORA2B', 'score': 0.39}]
chr17	GH17I016245	16245982	16251925	1.22	[{'connected_gene': 'GC17M016250', 'score': 550.77}, {'connected_gene': 'ZSWIM7', 'score': 32.28}, {'connected_gene': 'PIGL', 'score': 12.52}, {'connected_gene': 'NCOR1', 'score': 12.52}, {'connected_gene': 'MIR1288', 'score': 12.38}, {'connected_gene': 'RNU6-314P', 'score': 10.37}, {'connected_gene': 'ADORA2B', 'score': 6.13}, {'connected_gene': 'TTC19', 'score': 5.01}, {'connected_gene': 'GC17M016251', 'score': 0.77}]
chr17	GH17I015830	15830827	15831921	1.02	[{'connected_gene': 'ENSG00000265519', 'score': 20.0}, {'connected_gene': 'ZSWIM7', 'score': 12.54}, {'connected_gene': 'TTC19', 'score': 12.54}, {'connected_gene': 'ADORA2B', 'score': 11.99}, {'connected_gene': 'PIGL', 'score': 5.43}, {'connected_gene': 'LOC100418862', 'score': 0.77}, {'connected_gene': 'LOC105371557', 'score': 0.37}]
chr17	GH17I015955	15955886	15960298	1.72	[{'connected_gene': 'PIR48319', 'score': 550.77}, {'connected_gene': 'ZSWIM7', 'score': 14.18}, {'connected_gene': 'TTC19', 'score': 13.96}, {'connected_gene': 'RNU6-314P', 'score': 9.62}, {'connected_gene': 'NCOR1', 'score': 9.58}, {'connected_gene': 'PIGL', 'score': 6.26}, {'connected_gene': 'ADORA2B', 'score': 2.01}]
chr17	GH17I016254	16254446	16257701	1.02	[{'connected_gene': 'GC17P016256', 'score': 550.77}, {'connected_gene': 'ZSWIM7', 'score': 35.02}, {'connected_gene': 'MIR1288', 'score': 12.4}, {'connected_gene': 'NCOR1', 'score': 11.02}, {'connected_gene': 'RNU6-314P', 'score': 10.37}, {'connected_gene': 'PIGL', 'score': 10.34}, {'connected_gene': 'ADORA2B', 'score': 5.62}, {'connected_gene': 'TTC19', 'score': 4.92}, {'connected_gene': 'GC17M016251', 'score': 0.77}]