PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr8	56658873	56658877	CAGE_peak_4_at_TMEM68_5end
chr8	56685859	56685945	CAGE_peak_1_at_TMEM68_5end
chr8	56685950	56685963	CAGE_peak_2_at_TMEM68_5end
chr8	56685966	56685976	CAGE_peak_3_at_TMEM68_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I055843	55842002	55842159	0.4	[{'connected_gene': 'LYN', 'score': 13.5}, {'connected_gene': 'PENK', 'score': 4.69}, {'connected_gene': 'GC08P055855', 'score': 0.39}, {'connected_gene': 'TMEM68', 'score': 0.2}]
chr8	GH08I055846	55846888	55848962	1.38	[{'connected_gene': 'LYN', 'score': 17.61}, {'connected_gene': 'TGS1', 'score': 5.59}, {'connected_gene': 'TMEM68', 'score': 4.68}, {'connected_gene': 'PENK', 'score': 4.68}, {'connected_gene': 'GC08P055855', 'score': 0.44}]
chr8	GH08I055851	55851191	55854502	1.4	[{'connected_gene': 'LYN', 'score': 27.23}, {'connected_gene': 'TGS1', 'score': 5.77}, {'connected_gene': 'TMEM68', 'score': 5.02}, {'connected_gene': 'PENK', 'score': 4.85}, {'connected_gene': 'GC08P055855', 'score': 0.77}]
chr8	GH08I055830	55830029	55830814	0.31	[{'connected_gene': 'LYN', 'score': 13.0}, {'connected_gene': 'TGS1', 'score': 6.64}, {'connected_gene': 'GC08P055855', 'score': 0.31}, {'connected_gene': 'TMEM68', 'score': 0.22}]
chr8	GH08I055987	55987793	55994894	1.63	[{'connected_gene': 'LYN', 'score': 28.56}, {'connected_gene': 'TMEM68', 'score': 10.95}, {'connected_gene': 'TGS1', 'score': 10.95}, {'connected_gene': 'RPS20', 'score': 8.42}, {'connected_gene': 'PSMC6P1', 'score': 8.36}, {'connected_gene': 'RN7SL798P', 'score': 0.39}, {'connected_gene': 'GC08P056003', 'score': 0.39}]
chr8	GH08I056004	56004715	56007750	1.34	[{'connected_gene': 'LYN', 'score': 11.01}, {'connected_gene': 'TMEM68', 'score': 10.54}, {'connected_gene': 'TGS1', 'score': 10.54}, {'connected_gene': 'RPS20', 'score': 7.71}, {'connected_gene': 'GC08P056003', 'score': 0.77}, {'connected_gene': 'RN7SL323P', 'score': 0.37}]
chr8	GH08I055842	55842465	55846661	1.63	[{'connected_gene': 'LYN', 'score': 30.29}, {'connected_gene': 'TMEM68', 'score': 16.12}, {'connected_gene': 'TGS1', 'score': 5.58}, {'connected_gene': 'GC08P055855', 'score': 0.39}]
chr8	GH08I055877	55877870	55887411	2.52	[{'connected_gene': 'LYN', 'score': 610.78}, {'connected_gene': 'TMEM68', 'score': 4.42}, {'connected_gene': 'ENSG00000254325', 'score': 0.39}]
chr8	GH08I055831	55831761	55831832	0.22	[{'connected_gene': 'TGS1', 'score': 13.68}, {'connected_gene': 'LYN', 'score': 12.52}, {'connected_gene': 'GC08P055855', 'score': 0.34}, {'connected_gene': 'TMEM68', 'score': 0.22}]
chr8	GH08I055771	55771382	55775356	2.09	[{'connected_gene': 'TGS1', 'score': 605.02}, {'connected_gene': 'TMEM68', 'score': 568.52}, {'connected_gene': 'RPS20', 'score': 13.16}, {'connected_gene': 'LYN', 'score': 12.59}]
chr8	GH08I055839	55839691	55841680	0.87	[{'connected_gene': 'TGS1', 'score': 15.08}, {'connected_gene': 'TMEM68', 'score': 14.9}, {'connected_gene': 'LYN', 'score': 13.5}, {'connected_gene': 'GC08P055855', 'score': 0.37}]
chr8	GH08I055764	55764630	55764858	0.2	[{'connected_gene': 'TGS1', 'score': 15.88}, {'connected_gene': 'TMEM68', 'score': 0.44}, {'connected_gene': 'RNA5SP265', 'score': 0.37}]
chr8	GH08I055763	55763948	55764007	0.5	[{'connected_gene': 'TMEM68', 'score': 566.71}, {'connected_gene': 'RPS20', 'score': 4.77}, {'connected_gene': 'TGS1', 'score': 0.44}, {'connected_gene': 'RNA5SP265', 'score': 0.37}]
chr8	GH08I056009	56009479	56010571	0.52	[{'connected_gene': 'TMEM68', 'score': 10.53}, {'connected_gene': 'TGS1', 'score': 10.53}, {'connected_gene': 'RPS20', 'score': 6.81}, {'connected_gene': 'GC08P056003', 'score': 0.44}, {'connected_gene': 'RN7SL323P', 'score': 0.39}, {'connected_gene': 'LYN', 'score': 0.12}]
chr8	GH08I055760	55760910	55761836	0.66	[{'connected_gene': 'TMEM68', 'score': 16.67}, {'connected_gene': 'TGS1', 'score': 16.52}, {'connected_gene': 'RNA5SP265', 'score': 0.37}]
chr8	GH08I055815	55815182	55815311	0.57	[{'connected_gene': 'GC08P055855', 'score': 0.26}, {'connected_gene': 'TMEM68', 'score': 0.26}, {'connected_gene': 'TGS1', 'score': 0.26}]
chr8	GH08I055818	55818942	55819071	0.54	[{'connected_gene': 'GC08P055855', 'score': 0.28}, {'connected_gene': 'TMEM68', 'score': 0.25}, {'connected_gene': 'TGS1', 'score': 0.25}]
chr8	GH08I055859	55859101	55860179	0.2	[{'connected_gene': 'GC08P055857', 'score': 550.77}, {'connected_gene': 'TMEM68', 'score': 4.23}, {'connected_gene': 'GC08M055863', 'score': 0.77}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000522470	[[56608982, 56609393], [56637674, 56637818], [56663522, 56663693]]	[[56637785, 56637818], [56663522, 56663693]]
ENST00000519460	[[56651316, 56652777], [56656039, 56656179], [56657619, 56658606]]	None
ENST00000434581	[[56651316, 56652777], [56656039, 56656179], [56657619, 56657680], [56663522, 56663716], [56668802, 56668970], [56675193, 56675587], [56676494, 56676539], [56685827, 56685913]]	[[56652690, 56652777], [56656039, 56656179], [56657619, 56657680], [56663522, 56663716], [56668802, 56668970], [56675193, 56675518]]
ENST00000334667	[[56651316, 56652777], [56663522, 56663716], [56668802, 56668970], [56675193, 56675587], [56676494, 56676539], [56685827, 56685966]]	[[56652690, 56652777], [56663522, 56663716], [56668802, 56668970], [56675193, 56675518]]
ENST00000519784	[[56652259, 56652777], [56663522, 56663716], [56668802, 56668970], [56676494, 56676539], [56685827, 56685911]]	[[56652690, 56652777], [56663522, 56663716], [56668802, 56668953]]
ENST00000517576	[[56652502, 56652777], [56656039, 56656179], [56663522, 56663716], [56668802, 56668944]]	[[56656110, 56656179], [56663522, 56663716], [56668802, 56668944]]
ENST00000523073	[[56652730, 56652777], [56657619, 56657680], [56663522, 56663716], [56668802, 56668970], [56685827, 56685893]]	[[56652748, 56652777], [56657619, 56657680], [56663522, 56663716], [56668802, 56668953]]
ENST00000519780	[[56656039, 56656179], [56657619, 56657680], [56663522, 56663716], [56668802, 56668970], [56676494, 56676539], [56685827, 56685926]]	[[56656039, 56656179], [56657619, 56657680], [56663522, 56663716], [56668802, 56668953]]
ENST00000522090	[[56657636, 56657680], [56663522, 56663716], [56668802, 56668970], [56675193, 56675587], [56676494, 56676539], [56685785, 56685940]]	[[56657636, 56657680], [56663522, 56663716], [56668802, 56668970], [56675193, 56675518]]
ENST00000520061	[[56657650, 56657680], [56663522, 56663716], [56663979, 56664105], [56668802, 56668970], [56675193, 56675334]]	[[56664088, 56664105], [56668802, 56668970], [56675193, 56675334]]
ENST00000524121	[[56663445, 56663716], [56668802, 56668961]]	None
ENST00000522030	[[56663609, 56663716], [56675193, 56675567]]	[[56663609, 56663716], [56675193, 56675518]]
ENST00000523423	[[56668803, 56668970], [56675193, 56675587], [56676195, 56676260], [56676494, 56676539], [56685827, 56685866]]	[[56668803, 56668970], [56675193, 56675518]]
ENST00000520414	[[56668916, 56668970], [56675193, 56675587], [56676494, 56676539], [56685534, 56685680]]	[[56668916, 56668970], [56675193, 56675518]]
ENST00000521229	[[56673331, 56675587], [56676494, 56676539], [56685827, 56685926]]	[[56675110, 56675518]]
ENST00000522576	[[56674958, 56675587], [56676494, 56676539], [56685785, 56685937]]	[[56675110, 56675518]]
ENST00000523180	[[56675512, 56675587], [56675980, 56676260], [56676494, 56676539], [56685827, 56685937]]	[[56675512, 56675518]]
NM_001286657	[[56651302, 56652777], [56656039, 56656179], [56657619, 56657680], [56663522, 56663716], [56668802, 56668970], [56675193, 56675587], [56676494, 56676539]]	[[56652690, 56652777], [56656039, 56656179], [56657619, 56657680], [56663522, 56663716], [56668802, 56668970], [56675193, 56675518]]
NM_152417	[[56651302, 56652777], [56663522, 56663716], [56668802, 56668970], [56675193, 56675587], [56676494, 56676539], [56685827, 56685966]]	[[56652690, 56652777], [56663522, 56663716], [56668802, 56668970], [56675193, 56675518]]
NM_001286661	[[56651302, 56652777], [56657619, 56657680], [56663522, 56663716], [56668802, 56668970], [56685827, 56685966]]	[[56652748, 56652777], [56657619, 56657680], [56663522, 56663716], [56668802, 56668953]]
NM_001286660	[[56673331, 56675587], [56676494, 56676539], [56685827, 56685966]]	[[56675110, 56675518]]