PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000370872	[[75171169, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75188801, 75188954], [75198639, 75198702]]	[[75171979, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75188801, 75188818]]
ENST00000340866	[[75171169, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190518], [75198639, 75198714]]	[[75171979, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190505]]
ENST00000492102	[[75171171, 75172141], [75172582, 75174511]]	None
ENST00000417775	[[75171173, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190518], [75196065, 75196104], [75198639, 75199092]]	[[75171979, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190505]]
ENST00000370871	[[75171655, 75172141], [75172582, 75172678], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190518], [75198639, 75198706]]	[[75171979, 75172141], [75172582, 75172678], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190505]]
ENST00000370870	[[75172788, 75172888], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190518], [75196065, 75196104], [75198639, 75198745]]	[[75172788, 75172888], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190505]]
ENST00000441120	[[75175792, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190518], [75198450, 75198495]]	[[75175792, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190505]]
NM_001130042	[[75171169, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190518], [75196065, 75196104], [75198639, 75199092]]	[[75171979, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190505]]
NM_001889	[[75171169, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190518], [75198639, 75199092]]	[[75171979, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190505]]
NM_001130043	[[75171169, 75172141], [75172582, 75172678], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190518], [75198639, 75199092]]	[[75171979, 75172141], [75172582, 75172678], [75175781, 75175931], [75180262, 75180314], [75184892, 75185056], [75188801, 75188954], [75190394, 75190505]]
NM_001134759	[[75171169, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75188801, 75188954], [75198639, 75199092]]	[[75171979, 75172141], [75172582, 75172678], [75172786, 75172888], [75175781, 75175931], [75180262, 75180314], [75188801, 75188818]]

Promoter

Chrom	Start	End	Description
chr1	75198593	75198604	CAGE_peak_9_at_CRYZ_5end
chr1	75198605	75198621	CAGE_peak_6_at_CRYZ_5end
chr1	75198681	75198750	CAGE_peak_1_at_CRYZ_5end
chr1	75198940	75198973	CAGE_peak_2_at_CRYZ_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I074729	74729846	74734968	2.49	[{'connected_gene': 'CRYZ', 'score': 627.28}, {'connected_gene': 'TYW3', 'score': 567.98}, {'connected_gene': 'ENSG00000272864', 'score': 0.29}]
chr1	GH01I075074	75074486	75075790	0.59	[{'connected_gene': 'CRYZ', 'score': 3.96}, {'connected_gene': 'GC01M074990', 'score': 0.34}, {'connected_gene': 'ENSG00000261213', 'score': 0.25}]